Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
KRT3P12035 RNU6-414P-201ENST00000363705 104 ntBASIC1.59□□□□□ -2.15
KRT3P12035 RNU6-890P-201ENST00000384121 107 ntBASIC1.59□□□□□ -2.15
KRT3P12035 RNU6-1297P-201ENST00000384415 104 ntBASIC1.59□□□□□ -2.15
KRT3P12035 Y_RNA.498-201ENST00000384460 102 ntBASIC1.59□□□□□ -2.15
KRT3P12035 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
KRT3P12035 RNU1-139P-201ENST00000391307 165 ntBASIC1.59□□□□□ -2.15
KRT3P12035 MIR1185-2-201ENST00000408687 86 ntBASIC1.59□□□□□ -2.15
KRT3P12035 Y_RNA.605-201ENST00000410577 105 ntBASIC1.59□□□□□ -2.15
KRT3P12035 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.59□□□□□ -2.15
KRT3P12035 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.59□□□□□ -2.15
KRT3P12035 HSPE1P9-201ENST00000440046 311 ntBASIC1.59□□□□□ -2.15
KRT3P12035 AC073910.1-201ENST00000445047 438 ntBASIC1.59□□□□□ -2.15
KRT3P12035 MTCO3P10-201ENST00000455912 772 ntBASIC1.59□□□□□ -2.15
KRT3P12035 AC091951.2-201ENST00000500762 203 ntBASIC1.59□□□□□ -2.15
KRT3P12035 AK6P2-201ENST00000549020 471 ntBASIC1.59□□□□□ -2.15
KRT3P12035 SNORD53B-201ENST00000577887 78 ntBASIC1.59□□□□□ -2.15
KRT3P12035 MIR548S-201ENST00000581352 82 ntBASIC1.59□□□□□ -2.15
KRT3P12035 MIR4298-201ENST00000584380 73 ntBASIC1.59□□□□□ -2.15
KRT3P12035 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.59□□□□□ -2.15
KRT3P12035 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.59□□□□□ -2.15
KRT3P12035 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
KRT3P12035 Y_RNA.303-201ENST00000364998 94 ntBASIC1.58□□□□□ -2.16
KRT3P12035 MIR625-201ENST00000385047 85 ntBASIC1.58□□□□□ -2.16
KRT3P12035 AL117342.1-201ENST00000404861 406 ntBASIC1.58□□□□□ -2.16
KRT3P12035 MIR1323-201ENST00000408090 73 ntBASIC1.58□□□□□ -2.16
KRT3P12035 RNU6-1156P-201ENST00000410365 100 ntBASIC1.58□□□□□ -2.16
KRT3P12035 CST2P1-201ENST00000425770 87 ntBASIC1.58□□□□□ -2.16
KRT3P12035 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.58□□□□□ -2.16
KRT3P12035 MTND4P18-201ENST00000447010 465 ntBASIC1.58□□□□□ -2.16
KRT3P12035 RNU6-221P-201ENST00000459541 99 ntBASIC1.58□□□□□ -2.16
KRT3P12035 AC105758.1-201ENST00000506038 399 ntBASIC1.58□□□□□ -2.16
KRT3P12035 RNU6-507P-201ENST00000516045 100 ntBASIC1.58□□□□□ -2.16
KRT3P12035 RNU1-142P-201ENST00000516682 145 ntBASIC1.58□□□□□ -2.16
KRT3P12035 AC133104.2-201ENST00000615272 193 ntBASIC1.58□□□□□ -2.16
KRT3P12035 AC084781.2-201ENST00000615568 161 ntBASIC1.58□□□□□ -2.16
KRT3P12035 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
KRT3P12035 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
KRT3P12035 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.57□□□□□ -2.16
KRT3P12035 RNY3P11-201ENST00000364153 102 ntBASIC1.57□□□□□ -2.16
KRT3P12035 Y_RNA.287-201ENST00000364853 94 ntBASIC1.57□□□□□ -2.16
KRT3P12035 Y_RNA.314-201ENST00000365114 102 ntBASIC1.57□□□□□ -2.16
KRT3P12035 RNU6-338P-201ENST00000383888 105 ntBASIC1.57□□□□□ -2.16
KRT3P12035 Y_RNA.387-201ENST00000383918 102 ntBASIC1.57□□□□□ -2.16
KRT3P12035 AC016909.1-201ENST00000415916 166 ntBASIC1.57□□□□□ -2.16
KRT3P12035 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.57□□□□□ -2.16
KRT3P12035 EIF1P2-201ENST00000428233 350 ntBASIC1.57□□□□□ -2.16
KRT3P12035 AL591806.2-201ENST00000433122 173 ntBASIC1.57□□□□□ -2.16
KRT3P12035 AC245047.4-201ENST00000433189 144 ntBASIC1.57□□□□□ -2.16
KRT3P12035 AC125232.2-201ENST00000592457 143 ntBASIC1.57□□□□□ -2.16
KRT3P12035 AC010900.2-201ENST00000604508 210 ntBASIC1.57□□□□□ -2.16
KRT3P12035 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
KRT3P12035 AC100821.1-201ENST00000523153 2479 ntBASIC1.56□□□□□ -2.16
KRT3P12035 RNU6-60P-201ENST00000364792 103 ntBASIC1.56□□□□□ -2.16
KRT3P12035 RNU6-926P-201ENST00000384075 107 ntBASIC1.56□□□□□ -2.16
KRT3P12035 Y_RNA.474-201ENST00000384341 102 ntBASIC1.56□□□□□ -2.16
KRT3P12035 RNU6-296P-201ENST00000384608 107 ntBASIC1.56□□□□□ -2.16
KRT3P12035 MIR329-1-201ENST00000385028 80 ntBASIC1.56□□□□□ -2.16
KRT3P12035 MIR320A-201ENST00000385302 82 ntBASIC1.56□□□□□ -2.16
KRT3P12035 SNORA69.1-201ENST00000390904 137 ntBASIC1.56□□□□□ -2.16
KRT3P12035 RNU6-1009P-201ENST00000390996 107 ntBASIC1.56□□□□□ -2.16
KRT3P12035 SNORA67.6-201ENST00000391093 99 ntBASIC1.56□□□□□ -2.16
KRT3P12035 COX6CP10-201ENST00000416832 224 ntBASIC1.56□□□□□ -2.16
KRT3P12035 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.56□□□□□ -2.16
KRT3P12035 RPS27P22-201ENST00000478056 241 ntBASIC1.56□□□□□ -2.16
KRT3P12035 AL163195.1-201ENST00000496941 348 ntBASIC1.56□□□□□ -2.16
KRT3P12035 RNU6-470P-201ENST00000515954 104 ntBASIC1.56□□□□□ -2.16
KRT3P12035 Y_RNA.675-201ENST00000516389 149 ntBASIC1.56□□□□□ -2.16
KRT3P12035 RNA5SP437-201ENST00000517249 129 ntBASIC1.56□□□□□ -2.16
KRT3P12035 MIR8074-201ENST00000615081 81 ntBASIC1.56□□□□□ -2.16
KRT3P12035 AC104260.1-201ENST00000616660 539 ntBASIC1.56□□□□□ -2.16
KRT3P12035 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.56□□□□□ -2.16
KRT3P12035 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
KRT3P12035 Y_RNA.67-201ENST00000362870 100 ntBASIC1.55□□□□□ -2.16
KRT3P12035 SNORA67.5-201ENST00000391036 107 ntBASIC1.55□□□□□ -2.16
KRT3P12035 SNORA75.6-201ENST00000391318 127 ntBASIC1.55□□□□□ -2.16
KRT3P12035 MIR1267-201ENST00000408723 78 ntBASIC1.55□□□□□ -2.16
KRT3P12035 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.55□□□□□ -2.16
KRT3P12035 AC005002.2-201ENST00000438228 269 ntBASIC1.55□□□□□ -2.16
KRT3P12035 PCNPP5-201ENST00000452246 481 ntBASIC1.55□□□□□ -2.16
KRT3P12035 RNU7-34P-201ENST00000459394 64 ntBASIC1.55□□□□□ -2.16
KRT3P12035 AC005908.1-201ENST00000468701 347 ntBASIC1.55□□□□□ -2.16
KRT3P12035 RNU6-875P-201ENST00000516488 106 ntBASIC1.55□□□□□ -2.16
KRT3P12035 AL355375.2-201ENST00000574825 175 ntBASIC1.55□□□□□ -2.16
KRT3P12035 AL357075.2-201ENST00000614906 189 ntBASIC1.55□□□□□ -2.16
KRT3P12035 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
KRT3P12035 AC073544.1-201ENST00000600110 1595 ntBASIC1.55□□□□□ -2.16
KRT3P12035 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
KRT3P12035 RNU1-42P-201ENST00000364033 160 ntBASIC1.54□□□□□ -2.16
KRT3P12035 RNA5SP475-201ENST00000410568 110 ntBASIC1.54□□□□□ -2.16
KRT3P12035 AL354695.1-201ENST00000427935 228 ntBASIC1.54□□□□□ -2.16
KRT3P12035 AC069257.2-201ENST00000441819 155 ntBASIC1.54□□□□□ -2.16
KRT3P12035 MTND5P20-201ENST00000448677 143 ntBASIC1.54□□□□□ -2.16
KRT3P12035 AL117351.2-201ENST00000513571 157 ntBASIC1.54□□□□□ -2.16
KRT3P12035 SNORA31.24-201ENST00000517232 57 ntBASIC1.54□□□□□ -2.16
KRT3P12035 AC023157.2-201ENST00000540596 141 ntBASIC1.54□□□□□ -2.16
KRT3P12035 AL137100.2-201ENST00000555786 315 ntBASIC1.54□□□□□ -2.16
KRT3P12035 AP001485.1-201ENST00000604799 199 ntBASIC1.54□□□□□ -2.16
KRT3P12035 AL359075.3-201ENST00000613288 217 ntBASIC1.54□□□□□ -2.16
KRT3P12035 Y_RNA.804-201ENST00000615262 101 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms