Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.35□□□□□ -2.03
HOXC6P09630 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HOXC6P09630 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
HOXC6P09630 Y_RNA.277-201ENST00000364754 102 ntBASIC2.34□□□□□ -2.03
HOXC6P09630 SNORA18.2-201ENST00000383865 132 ntBASIC2.34□□□□□ -2.03
HOXC6P09630 SNORD63-201ENST00000384262 68 ntBASIC2.34□□□□□ -2.03
HOXC6P09630 Y_RNA.518-201ENST00000384552 113 ntBASIC2.34□□□□□ -2.03
HOXC6P09630 Y_RNA.539-201ENST00000384635 107 ntBASIC2.34□□□□□ -2.03
HOXC6P09630 AL033519.2-201ENST00000403958 392 ntBASIC2.34□□□□□ -2.03
HOXC6P09630 ELOCP21-201ENST00000412558 336 ntBASIC2.34□□□□□ -2.03
HOXC6P09630 AC004386.2-201ENST00000441858 148 ntBASIC2.34□□□□□ -2.03
HOXC6P09630 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.34□□□□□ -2.03
HOXC6P09630 AC140059.1-201ENST00000489238 361 ntBASIC2.34□□□□□ -2.03
HOXC6P09630 Y_RNA.683-201ENST00000516508 93 ntBASIC2.34□□□□□ -2.03
HOXC6P09630 RNA5SP402-201ENST00000517148 110 ntBASIC2.34□□□□□ -2.03
HOXC6P09630 EIF4A1P12-201ENST00000551910 141 ntBASIC2.34□□□□□ -2.03
HOXC6P09630 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.34□□□□□ -2.03
HOXC6P09630 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.34□□□□□ -2.03
HOXC6P09630 MIR4643-201ENST00000577473 78 ntBASIC2.34□□□□□ -2.03
HOXC6P09630 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.34□□□□□ -2.03
HOXC6P09630 RPL30P11-203ENST00000598995 310 ntBASIC2.34□□□□□ -2.03
HOXC6P09630 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.34□□□□□ -2.03
HOXC6P09630 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
HOXC6P09630 AL359854.1-201ENST00000614203 1594 ntBASIC2.34□□□□□ -2.03
HOXC6P09630 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
HOXC6P09630 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.34□□□□□ -2.04
HOXC6P09630 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HOXC6P09630 Y_RNA.65-201ENST00000362846 100 ntBASIC2.33□□□□□ -2.04
HOXC6P09630 U3.9-201ENST00000363823 204 ntBASIC2.33□□□□□ -2.04
HOXC6P09630 RNU6-461P-201ENST00000364195 107 ntBASIC2.33□□□□□ -2.04
HOXC6P09630 SNORD87-201ENST00000364849 89 ntBASIC2.33□□□□□ -2.04
HOXC6P09630 RNU6-1175P-201ENST00000365200 107 ntBASIC2.33□□□□□ -2.04
HOXC6P09630 RNU6-338P-201ENST00000383888 105 ntBASIC2.33□□□□□ -2.04
HOXC6P09630 Y_RNA.415-201ENST00000384012 112 ntBASIC2.33□□□□□ -2.04
HOXC6P09630 RNU6-793P-201ENST00000384233 104 ntBASIC2.33□□□□□ -2.04
HOXC6P09630 Y_RNA.498-201ENST00000384460 102 ntBASIC2.33□□□□□ -2.04
HOXC6P09630 MIR583-201ENST00000384846 75 ntBASIC2.33□□□□□ -2.04
HOXC6P09630 SNORA46.1-201ENST00000391069 153 ntBASIC2.33□□□□□ -2.04
HOXC6P09630 AL139156.1-201ENST00000412785 841 ntBASIC2.33□□□□□ -2.04
HOXC6P09630 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.33□□□□□ -2.04
HOXC6P09630 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.33□□□□□ -2.04
HOXC6P09630 UQCRBP2-201ENST00000447827 297 ntBASIC2.33□□□□□ -2.04
HOXC6P09630 RNU1-104P-201ENST00000517280 175 ntBASIC2.33□□□□□ -2.04
HOXC6P09630 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.33□□□□□ -2.04
HOXC6P09630 AP002001.1-203ENST00000534002 267 ntBASIC2.33□□□□□ -2.04
HOXC6P09630 AC018448.1-201ENST00000552843 316 ntBASIC2.33□□□□□ -2.04
HOXC6P09630 AC011373.1-201ENST00000607270 237 ntBASIC2.33□□□□□ -2.04
HOXC6P09630 MIR7515-201ENST00000637837 67 ntBASIC2.33□□□□□ -2.04
HOXC6P09630 AC131280.1-202ENST00000624067 4211 ntBASIC2.33□□□□□ -2.04
HOXC6P09630 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
HOXC6P09630 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.32□□□□□ -2.04
HOXC6P09630 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
HOXC6P09630 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
HOXC6P09630 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
HOXC6P09630 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HOXC6P09630 MIR335-201ENST00000362173 94 ntBASIC2.32□□□□□ -2.04
HOXC6P09630 MIRLET7G-201ENST00000362280 84 ntBASIC2.32□□□□□ -2.04
HOXC6P09630 Y_RNA.101-201ENST00000363154 102 ntBASIC2.32□□□□□ -2.04
HOXC6P09630 Y_RNA.416-201ENST00000384014 113 ntBASIC2.32□□□□□ -2.04
HOXC6P09630 Y_RNA.462-201ENST00000384268 102 ntBASIC2.32□□□□□ -2.04
HOXC6P09630 Y_RNA.570-201ENST00000384750 101 ntBASIC2.32□□□□□ -2.04
HOXC6P09630 MIR218-1-201ENST00000384999 110 ntBASIC2.32□□□□□ -2.04
HOXC6P09630 RNU5A-5P-201ENST00000411054 116 ntBASIC2.32□□□□□ -2.04
HOXC6P09630 RNU6-847P-201ENST00000411115 108 ntBASIC2.32□□□□□ -2.04
HOXC6P09630 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.32□□□□□ -2.04
HOXC6P09630 AC139712.2-201ENST00000424302 339 ntBASIC2.32□□□□□ -2.04
HOXC6P09630 AC007395.1-201ENST00000451333 677 ntBASIC2.32□□□□□ -2.04
HOXC6P09630 AL139109.1-201ENST00000455491 297 ntBASIC2.32□□□□□ -2.04
HOXC6P09630 RNU6-625P-201ENST00000459412 107 ntBASIC2.32□□□□□ -2.04
HOXC6P09630 SEPT14P8-201ENST00000508026 178 ntBASIC2.32□□□□□ -2.04
HOXC6P09630 MIR449C-201ENST00000516047 92 ntBASIC2.32□□□□□ -2.04
HOXC6P09630 RNU2-44P-201ENST00000516795 194 ntBASIC2.32□□□□□ -2.04
HOXC6P09630 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.32□□□□□ -2.04
HOXC6P09630 MIR4423-201ENST00000580922 80 ntBASIC2.32□□□□□ -2.04
HOXC6P09630 MIR3616-201ENST00000584070 92 ntBASIC2.32□□□□□ -2.04
HOXC6P09630 AC005176.2-201ENST00000596933 147 ntBASIC2.32□□□□□ -2.04
HOXC6P09630 AC008749.1-201ENST00000597650 306 ntBASIC2.32□□□□□ -2.04
HOXC6P09630 SNRPGP20-201ENST00000604477 205 ntBASIC2.32□□□□□ -2.04
HOXC6P09630 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.32□□□□□ -2.04
HOXC6P09630 AC004467.1-201ENST00000615678 330 ntBASIC2.32□□□□□ -2.04
HOXC6P09630 AC090517.3-201ENST00000625170 141 ntBASIC2.32□□□□□ -2.04
HOXC6P09630 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HOXC6P09630 AC010329.5-201ENST00000623497 2174 ntBASIC2.32□□□□□ -2.04
HOXC6P09630 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.31□□□□□ -2.04
HOXC6P09630 RNU4-90P-201ENST00000362773 141 ntBASIC2.31□□□□□ -2.04
HOXC6P09630 SNORD81.1-201ENST00000363064 77 ntBASIC2.31□□□□□ -2.04
HOXC6P09630 SNORA67.1-201ENST00000364749 141 ntBASIC2.31□□□□□ -2.04
HOXC6P09630 RNU6-290P-201ENST00000365212 101 ntBASIC2.31□□□□□ -2.04
HOXC6P09630 Y_RNA.338-201ENST00000365320 114 ntBASIC2.31□□□□□ -2.04
HOXC6P09630 RNU6-1083P-201ENST00000384022 107 ntBASIC2.31□□□□□ -2.04
HOXC6P09630 Y_RNA.446-201ENST00000384178 104 ntBASIC2.31□□□□□ -2.04
HOXC6P09630 Y_RNA.552-201ENST00000384665 112 ntBASIC2.31□□□□□ -2.04
HOXC6P09630 RNU6-21P-201ENST00000384710 107 ntBASIC2.31□□□□□ -2.04
HOXC6P09630 RNU2-14P-201ENST00000411053 191 ntBASIC2.31□□□□□ -2.04
HOXC6P09630 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.31□□□□□ -2.04
HOXC6P09630 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.31□□□□□ -2.04
HOXC6P09630 AC090515.1-201ENST00000465295 476 ntBASIC2.31□□□□□ -2.04
HOXC6P09630 RNU1-117P-201ENST00000517041 158 ntBASIC2.31□□□□□ -2.04
HOXC6P09630 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.31□□□□□ -2.04
HOXC6P09630 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms