Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 RNU6-1198P-201ENST00000516904 67 ntBASIC1.15□□□□□ -2.23
MRPL3P09001 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.15□□□□□ -2.23
MRPL3P09001 AC004584.2-201ENST00000570407 410 ntBASIC1.15□□□□□ -2.23
MRPL3P09001 AL355375.2-201ENST00000574825 175 ntBASIC1.15□□□□□ -2.23
MRPL3P09001 AC010999.1-201ENST00000611856 324 ntBASIC1.15□□□□□ -2.23
MRPL3P09001 AC006001.4-201ENST00000622243 395 ntBASIC1.15□□□□□ -2.23
MRPL3P09001 MIR338-201ENST00000636369 67 ntBASIC1.15□□□□□ -2.23
MRPL3P09001 MIR1302-1-201ENST00000637932 143 ntBASIC1.15□□□□□ -2.23
MRPL3P09001 AC112487.2-201ENST00000637950 304 ntBASIC1.15□□□□□ -2.23
MRPL3P09001 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
MRPL3P09001 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
MRPL3P09001 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
MRPL3P09001 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
MRPL3P09001 Y_RNA.70-201ENST00000362886 110 ntBASIC1.14□□□□□ -2.23
MRPL3P09001 RNU6-112P-201ENST00000363599 104 ntBASIC1.14□□□□□ -2.23
MRPL3P09001 RNU6-414P-201ENST00000363705 104 ntBASIC1.14□□□□□ -2.23
MRPL3P09001 Y_RNA.179-201ENST00000363844 90 ntBASIC1.14□□□□□ -2.23
MRPL3P09001 RNY3P11-201ENST00000364153 102 ntBASIC1.14□□□□□ -2.23
MRPL3P09001 MIR559-201ENST00000385188 96 ntBASIC1.14□□□□□ -2.23
MRPL3P09001 MTCYBP10-201ENST00000424905 650 ntBASIC1.14□□□□□ -2.23
MRPL3P09001 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.14□□□□□ -2.23
MRPL3P09001 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.14□□□□□ -2.23
MRPL3P09001 AC092423.1-201ENST00000430165 186 ntBASIC1.14□□□□□ -2.23
MRPL3P09001 HMGN2P34-201ENST00000437647 269 ntBASIC1.14□□□□□ -2.23
MRPL3P09001 MTND5P20-201ENST00000448677 143 ntBASIC1.14□□□□□ -2.23
MRPL3P09001 RPS29P29-201ENST00000456396 171 ntBASIC1.14□□□□□ -2.23
MRPL3P09001 RNU7-87P-201ENST00000459343 62 ntBASIC1.14□□□□□ -2.23
MRPL3P09001 AC004223.1-201ENST00000479840 271 ntBASIC1.14□□□□□ -2.23
MRPL3P09001 Y_RNA.718-201ENST00000517110 102 ntBASIC1.14□□□□□ -2.23
MRPL3P09001 AC025647.1-201ENST00000517879 253 ntBASIC1.14□□□□□ -2.23
MRPL3P09001 SUMO2P18-201ENST00000518873 252 ntBASIC1.14□□□□□ -2.23
MRPL3P09001 AP002001.1-203ENST00000534002 267 ntBASIC1.14□□□□□ -2.23
MRPL3P09001 AC093023.1-201ENST00000547375 507 ntBASIC1.14□□□□□ -2.23
MRPL3P09001 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.14□□□□□ -2.23
MRPL3P09001 AC090617.3-201ENST00000573670 475 ntBASIC1.14□□□□□ -2.23
MRPL3P09001 MIR4303-201ENST00000581299 66 ntBASIC1.14□□□□□ -2.23
MRPL3P09001 MIR4422-201ENST00000581938 83 ntBASIC1.14□□□□□ -2.23
MRPL3P09001 7SK.7-201ENST00000603504 247 ntBASIC1.14□□□□□ -2.23
MRPL3P09001 AL078596.1-201ENST00000624856 447 ntBASIC1.14□□□□□ -2.23
MRPL3P09001 snoZ196.1-201ENST00000625269 89 ntBASIC1.14□□□□□ -2.23
MRPL3P09001 MTND5P35-201ENST00000557537 1720 ntBASIC1.14□□□□□ -2.23
MRPL3P09001 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
MRPL3P09001 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
MRPL3P09001 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
MRPL3P09001 Y_RNA.58-201ENST00000362807 102 ntBASIC1.13□□□□□ -2.23
MRPL3P09001 Y_RNA.154-201ENST00000363624 102 ntBASIC1.13□□□□□ -2.23
MRPL3P09001 RNU6-280P-201ENST00000364145 104 ntBASIC1.13□□□□□ -2.23
MRPL3P09001 RNY3P1-201ENST00000365085 102 ntBASIC1.13□□□□□ -2.23
MRPL3P09001 RNY3-201ENST00000365484 102 ntBASIC1.13□□□□□ -2.23
MRPL3P09001 RNU6-1145P-201ENST00000384246 107 ntBASIC1.13□□□□□ -2.23
MRPL3P09001 RNU6-700P-201ENST00000391043 107 ntBASIC1.13□□□□□ -2.23
MRPL3P09001 MIR320B2-201ENST00000408479 138 ntBASIC1.13□□□□□ -2.23
MRPL3P09001 MIR1185-2-201ENST00000408687 86 ntBASIC1.13□□□□□ -2.23
MRPL3P09001 MIR1267-201ENST00000408723 78 ntBASIC1.13□□□□□ -2.23
MRPL3P09001 ELOCP21-201ENST00000412558 336 ntBASIC1.13□□□□□ -2.23
MRPL3P09001 AC015922.2-201ENST00000435593 184 ntBASIC1.13□□□□□ -2.23
MRPL3P09001 CHEK2P4-201ENST00000450340 246 ntBASIC1.13□□□□□ -2.23
MRPL3P09001 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.13□□□□□ -2.23
MRPL3P09001 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.13□□□□□ -2.23
MRPL3P09001 ELOCP24-201ENST00000456370 334 ntBASIC1.13□□□□□ -2.23
MRPL3P09001 RPL30P15-201ENST00000457129 321 ntBASIC1.13□□□□□ -2.23
MRPL3P09001 Y_RNA.632-201ENST00000459189 102 ntBASIC1.13□□□□□ -2.23
MRPL3P09001 snoU13.15-201ENST00000459407 104 ntBASIC1.13□□□□□ -2.23
MRPL3P09001 RNU6-221P-201ENST00000459541 99 ntBASIC1.13□□□□□ -2.23
MRPL3P09001 AC105758.1-201ENST00000506038 399 ntBASIC1.13□□□□□ -2.23
MRPL3P09001 RNU2-34P-201ENST00000516534 121 ntBASIC1.13□□□□□ -2.23
MRPL3P09001 Y_RNA.702-201ENST00000516843 96 ntBASIC1.13□□□□□ -2.23
MRPL3P09001 RNA5SP437-201ENST00000517249 129 ntBASIC1.13□□□□□ -2.23
MRPL3P09001 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.13□□□□□ -2.23
MRPL3P09001 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.13□□□□□ -2.23
MRPL3P09001 AC005899.2-201ENST00000584353 90 ntBASIC1.13□□□□□ -2.23
MRPL3P09001 AL353149.1-201ENST00000610667 244 ntBASIC1.13□□□□□ -2.23
MRPL3P09001 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
MRPL3P09001 MIR7843-201ENST00000622274 79 ntBASIC1.13□□□□□ -2.23
MRPL3P09001 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.13□□□□□ -2.23
MRPL3P09001 U6.108-201ENST00000637764 58 ntBASIC1.13□□□□□ -2.23
MRPL3P09001 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
MRPL3P09001 snoU2-30.2-201ENST00000362805 70 ntBASIC1.12□□□□□ -2.23
MRPL3P09001 RNU1-96P-201ENST00000364163 162 ntBASIC1.12□□□□□ -2.23
MRPL3P09001 Y_RNA.263-201ENST00000364659 114 ntBASIC1.12□□□□□ -2.23
MRPL3P09001 Y_RNA.387-201ENST00000383918 102 ntBASIC1.12□□□□□ -2.23
MRPL3P09001 RNU6-417P-201ENST00000384712 107 ntBASIC1.12□□□□□ -2.23
MRPL3P09001 RNY4P36-201ENST00000391116 96 ntBASIC1.12□□□□□ -2.23
MRPL3P09001 RNU1-78P-201ENST00000391248 165 ntBASIC1.12□□□□□ -2.23
MRPL3P09001 RNA5SP467-201ENST00000391274 118 ntBASIC1.12□□□□□ -2.23
MRPL3P09001 RNU6-1156P-201ENST00000410365 100 ntBASIC1.12□□□□□ -2.23
MRPL3P09001 AF228730.4-201ENST00000421457 183 ntBASIC1.12□□□□□ -2.23
MRPL3P09001 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.12□□□□□ -2.23
MRPL3P09001 RPL23AP50-201ENST00000434149 455 ntBASIC1.12□□□□□ -2.23
MRPL3P09001 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.12□□□□□ -2.23
MRPL3P09001 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.12□□□□□ -2.23
MRPL3P09001 NDUFB4P10-201ENST00000452541 359 ntBASIC1.12□□□□□ -2.23
MRPL3P09001 Y_RNA.653-201ENST00000459091 95 ntBASIC1.12□□□□□ -2.23
MRPL3P09001 AC114982.1-201ENST00000469402 321 ntBASIC1.12□□□□□ -2.23
MRPL3P09001 HMGN1P13-201ENST00000505795 138 ntBASIC1.12□□□□□ -2.23
MRPL3P09001 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.12□□□□□ -2.23
MRPL3P09001 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.12□□□□□ -2.23
MRPL3P09001 RNU6-470P-201ENST00000515954 104 ntBASIC1.12□□□□□ -2.23
MRPL3P09001 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.12□□□□□ -2.23
MRPL3P09001 Y_RNA.683-201ENST00000516508 93 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 237.8 ms