Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AL663109.1-201ENST00000411498 844 ntBASIC0.63□□□□□ -2.31
COL4A2P08572 MTND5P15-201ENST00000434246 349 ntBASIC0.63□□□□□ -2.31
COL4A2P08572 MTCO2P16-201ENST00000436962 677 ntBASIC0.63□□□□□ -2.31
COL4A2P08572 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.63□□□□□ -2.31
COL4A2P08572 AC083798.1-201ENST00000472671 131 ntBASIC0.63□□□□□ -2.31
COL4A2P08572 MTCO1P29-201ENST00000496868 288 ntBASIC0.63□□□□□ -2.31
COL4A2P08572 AC010424.1-201ENST00000506336 297 ntBASIC0.63□□□□□ -2.31
COL4A2P08572 Y_RNA.688-201ENST00000516565 95 ntBASIC0.63□□□□□ -2.31
COL4A2P08572 RNU6-229P-201ENST00000516614 102 ntBASIC0.63□□□□□ -2.31
COL4A2P08572 AC025647.1-201ENST00000517879 253 ntBASIC0.63□□□□□ -2.31
COL4A2P08572 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
COL4A2P08572 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC0.63□□□□□ -2.31
COL4A2P08572 AC004584.2-201ENST00000570407 410 ntBASIC0.63□□□□□ -2.31
COL4A2P08572 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.63□□□□□ -2.31
COL4A2P08572 MIR4742-201ENST00000581069 85 ntBASIC0.63□□□□□ -2.31
COL4A2P08572 HSPE1P19-201ENST00000603327 295 ntBASIC0.63□□□□□ -2.31
COL4A2P08572 AP001330.5-201ENST00000607176 411 ntBASIC0.63□□□□□ -2.31
COL4A2P08572 AL359075.3-201ENST00000613288 217 ntBASIC0.63□□□□□ -2.31
COL4A2P08572 FER-210ENST00000628534 558 ntTSL 5 BASIC0.63□□□□□ -2.31
COL4A2P08572 MIR6866-201ENST00000638146 69 ntBASIC0.63□□□□□ -2.31
COL4A2P08572 RNA5SP347-201ENST00000362445 119 ntBASIC0.62□□□□□ -2.31
COL4A2P08572 RNA5SP259-201ENST00000365541 109 ntBASIC0.62□□□□□ -2.31
COL4A2P08572 Y_RNA.390-201ENST00000383932 102 ntBASIC0.62□□□□□ -2.31
COL4A2P08572 SNORD116-9-201ENST00000384000 95 ntBASIC0.62□□□□□ -2.31
COL4A2P08572 SNORD116-3-201ENST00000384287 95 ntBASIC0.62□□□□□ -2.31
COL4A2P08572 SNORA25-201ENST00000384384 134 ntBASIC0.62□□□□□ -2.31
COL4A2P08572 SNORD116-7-201ENST00000384404 95 ntBASIC0.62□□□□□ -2.31
COL4A2P08572 SNORD116-5-201ENST00000384462 95 ntBASIC0.62□□□□□ -2.31
COL4A2P08572 DEFB108C-201ENST00000400154 252 ntBASIC0.62□□□□□ -2.31
COL4A2P08572 AC004866.1-201ENST00000411748 78 ntBASIC0.62□□□□□ -2.31
COL4A2P08572 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.62□□□□□ -2.31
COL4A2P08572 HSPE1P13-201ENST00000451143 297 ntBASIC0.62□□□□□ -2.31
COL4A2P08572 AC083904.1-201ENST00000487828 231 ntBASIC0.62□□□□□ -2.31
COL4A2P08572 DEFB131C-201ENST00000528817 165 ntBASIC0.62□□□□□ -2.31
COL4A2P08572 TPRKBP2-201ENST00000565969 475 ntBASIC0.62□□□□□ -2.31
COL4A2P08572 AC015688.6-201ENST00000577737 104 ntBASIC0.62□□□□□ -2.31
COL4A2P08572 AL929325.1-201ENST00000603096 117 ntBASIC0.62□□□□□ -2.31
COL4A2P08572 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.62□□□□□ -2.31
COL4A2P08572 Z99129.1-201ENST00000612510 255 ntBASIC0.62□□□□□ -2.31
COL4A2P08572 MIR8054-201ENST00000620877 86 ntBASIC0.62□□□□□ -2.31
COL4A2P08572 AC006001.4-201ENST00000622243 395 ntBASIC0.62□□□□□ -2.31
COL4A2P08572 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
COL4A2P08572 RNU6-1123P-201ENST00000362347 106 ntBASIC0.61□□□□□ -2.31
COL4A2P08572 SNORD113-7-201ENST00000363762 77 ntBASIC0.61□□□□□ -2.31
COL4A2P08572 SNORA4.2-201ENST00000365313 147 ntBASIC0.61□□□□□ -2.31
COL4A2P08572 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
COL4A2P08572 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.61□□□□□ -2.31
COL4A2P08572 AF186996.7-201ENST00000492781 209 ntBASIC0.61□□□□□ -2.31
COL4A2P08572 RNU6-496P-201ENST00000516145 99 ntBASIC0.61□□□□□ -2.31
COL4A2P08572 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.61□□□□□ -2.31
COL4A2P08572 AL118558.2-201ENST00000556294 238 ntBASIC0.61□□□□□ -2.31
COL4A2P08572 AL158211.1-201ENST00000566763 763 ntBASIC0.61□□□□□ -2.31
COL4A2P08572 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.61□□□□□ -2.31
COL4A2P08572 AC010620.1-201ENST00000601088 1102 ntBASIC0.61□□□□□ -2.31
COL4A2P08572 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.61□□□□□ -2.31
COL4A2P08572 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
COL4A2P08572 RNA5SP327-201ENST00000362494 101 ntBASIC0.61□□□□□ -2.31
COL4A2P08572 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
COL4A2P08572 RNU6-332P-201ENST00000391193 108 ntBASIC0.61□□□□□ -2.31
COL4A2P08572 AF228730.1-201ENST00000397972 663 ntBASIC0.61□□□□□ -2.31
COL4A2P08572 RNU2-66P-201ENST00000410650 161 ntBASIC0.61□□□□□ -2.31
COL4A2P08572 SNORD65B-201ENST00000459126 73 ntBASIC0.61□□□□□ -2.31
COL4A2P08572 AC010486.3-201ENST00000511602 785 ntBASIC0.61□□□□□ -2.31
COL4A2P08572 RNU6-58P-201ENST00000517143 103 ntBASIC0.61□□□□□ -2.31
COL4A2P08572 POLR3GP2-201ENST00000588366 668 ntBASIC0.61□□□□□ -2.31
COL4A2P08572 AL162413.1-201ENST00000603198 110 ntBASIC0.61□□□□□ -2.31
COL4A2P08572 AL513534.2-201ENST00000603836 250 ntBASIC0.61□□□□□ -2.31
COL4A2P08572 AC021506.2-201ENST00000612354 169 ntBASIC0.61□□□□□ -2.31
COL4A2P08572 AC009248.2-201ENST00000619826 254 ntBASIC0.61□□□□□ -2.31
COL4A2P08572 AC243829.3-201ENST00000622177 108 ntBASIC0.61□□□□□ -2.31
COL4A2P08572 AC027335.2-201ENST00000624030 375 ntBASIC0.61□□□□□ -2.31
COL4A2P08572 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.6□□□□□ -2.31
COL4A2P08572 RNU6-128P-201ENST00000383976 107 ntBASIC0.6□□□□□ -2.31
COL4A2P08572 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.6□□□□□ -2.31
COL4A2P08572 RNU6-1068P-201ENST00000410958 103 ntBASIC0.6□□□□□ -2.31
COL4A2P08572 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.6□□□□□ -2.31
COL4A2P08572 MRPS10P2-201ENST00000431226 381 ntBASIC0.6□□□□□ -2.31
COL4A2P08572 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.6□□□□□ -2.31
COL4A2P08572 ERLEC1P1-201ENST00000433806 578 ntBASIC0.6□□□□□ -2.31
COL4A2P08572 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.6□□□□□ -2.31
COL4A2P08572 RNU7-187P-201ENST00000458985 68 ntBASIC0.6□□□□□ -2.31
COL4A2P08572 MTCO2P30-201ENST00000503662 364 ntBASIC0.6□□□□□ -2.31
COL4A2P08572 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.6□□□□□ -2.31
COL4A2P08572 RNU7-99P-201ENST00000516271 62 ntBASIC0.6□□□□□ -2.31
COL4A2P08572 SNORA70.22-201ENST00000517160 124 ntBASIC0.6□□□□□ -2.31
COL4A2P08572 ZNF519P2-201ENST00000557032 169 ntBASIC0.6□□□□□ -2.31
COL4A2P08572 MIR5696-201ENST00000578474 85 ntBASIC0.6□□□□□ -2.31
COL4A2P08572 AC146944.4-201ENST00000602697 718 ntBASIC0.6□□□□□ -2.31
COL4A2P08572 AC019193.3-201ENST00000609144 554 ntBASIC0.6□□□□□ -2.31
COL4A2P08572 DISC2.1-201ENST00000612827 205 ntBASIC0.6□□□□□ -2.31
COL4A2P08572 U6.73-201ENST00000619194 103 ntBASIC0.6□□□□□ -2.31
COL4A2P08572 U6.108-201ENST00000637764 58 ntBASIC0.6□□□□□ -2.31
COL4A2P08572 MTND5P26-201ENST00000426018 1752 ntBASIC0.59□□□□□ -2.31
COL4A2P08572 Y_RNA.167-201ENST00000363735 109 ntBASIC0.59□□□□□ -2.31
COL4A2P08572 Y_RNA.179-201ENST00000363844 90 ntBASIC0.59□□□□□ -2.31
COL4A2P08572 Y_RNA.359-201ENST00000365498 102 ntBASIC0.59□□□□□ -2.31
COL4A2P08572 MIR19B1-201ENST00000384829 87 ntBASIC0.59□□□□□ -2.31
COL4A2P08572 MIR653-201ENST00000385279 96 ntBASIC0.59□□□□□ -2.31
COL4A2P08572 RNA5SP109-201ENST00000391010 116 ntBASIC0.59□□□□□ -2.31
COL4A2P08572 AL606517.2-201ENST00000442855 241 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms