Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC080078.3-201ENST00000605407 463 ntBASIC1.94□□□□□ -2.1
RB1P06400 MIR502-201ENST00000606349 86 ntBASIC1.94□□□□□ -2.1
RB1P06400 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.94□□□□□ -2.1
RB1P06400 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.94□□□□□ -2.1
RB1P06400 AC112487.2-201ENST00000637950 304 ntBASIC1.94□□□□□ -2.1
RB1P06400 RNA5SP361-201ENST00000362686 118 ntBASIC1.93□□□□□ -2.1
RB1P06400 RNU6-879P-201ENST00000364328 108 ntBASIC1.93□□□□□ -2.1
RB1P06400 RNA5SP160-201ENST00000364866 120 ntBASIC1.93□□□□□ -2.1
RB1P06400 RNU6-1156P-201ENST00000410365 100 ntBASIC1.93□□□□□ -2.1
RB1P06400 AC016909.1-201ENST00000415916 166 ntBASIC1.93□□□□□ -2.1
RB1P06400 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.93□□□□□ -2.1
RB1P06400 SNORD19B-201ENST00000459623 84 ntBASIC1.93□□□□□ -2.1
RB1P06400 HMGB3P17-201ENST00000504195 649 ntBASIC1.93□□□□□ -2.1
RB1P06400 AC025647.1-201ENST00000517879 253 ntBASIC1.93□□□□□ -2.1
RB1P06400 CYCSP23-201ENST00000519781 313 ntBASIC1.93□□□□□ -2.1
RB1P06400 AC022254.1-201ENST00000567857 235 ntBASIC1.93□□□□□ -2.1
RB1P06400 MIR8070-201ENST00000616510 88 ntBASIC1.93□□□□□ -2.1
RB1P06400 AC126177.8-201ENST00000618339 1015 ntBASIC1.93□□□□□ -2.1
RB1P06400 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
RB1P06400 snoU2-30.2-201ENST00000362805 70 ntBASIC1.92□□□□□ -2.1
RB1P06400 Y_RNA.67-201ENST00000362870 100 ntBASIC1.92□□□□□ -2.1
RB1P06400 RNU1-96P-201ENST00000364163 162 ntBASIC1.92□□□□□ -2.1
RB1P06400 MIR1185-2-201ENST00000408687 86 ntBASIC1.92□□□□□ -2.1
RB1P06400 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.92□□□□□ -2.1
RB1P06400 CST2P1-201ENST00000425770 87 ntBASIC1.92□□□□□ -2.1
RB1P06400 HMGN2P34-201ENST00000437647 269 ntBASIC1.92□□□□□ -2.1
RB1P06400 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.92□□□□□ -2.1
RB1P06400 RNU7-152P-201ENST00000458982 64 ntBASIC1.92□□□□□ -2.1
RB1P06400 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.92□□□□□ -2.1
RB1P06400 RNU6-1146P-201ENST00000516282 102 ntBASIC1.92□□□□□ -2.1
RB1P06400 RNU7-4P-201ENST00000516961 62 ntBASIC1.92□□□□□ -2.1
RB1P06400 MIR2355-201ENST00000517199 87 ntBASIC1.92□□□□□ -2.1
RB1P06400 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.92□□□□□ -2.1
RB1P06400 MIR4713-201ENST00000582691 75 ntBASIC1.92□□□□□ -2.1
RB1P06400 MIR8081-201ENST00000611533 95 ntBASIC1.92□□□□□ -2.1
RB1P06400 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.92□□□□□ -2.1
RB1P06400 MIR338-201ENST00000636369 67 ntBASIC1.92□□□□□ -2.1
RB1P06400 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.92□□□□□ -2.1
RB1P06400 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
RB1P06400 AC073544.1-201ENST00000600110 1595 ntBASIC1.91□□□□□ -2.1
RB1P06400 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
RB1P06400 RNU6-1145P-201ENST00000384246 107 ntBASIC1.91□□□□□ -2.1
RB1P06400 MIR559-201ENST00000385188 96 ntBASIC1.91□□□□□ -2.1
RB1P06400 MT-TD-201ENST00000387419 68 ntBASIC1.91□□□□□ -2.1
RB1P06400 SNORA69.1-201ENST00000390904 137 ntBASIC1.91□□□□□ -2.1
RB1P06400 AC114482.1-201ENST00000418010 247 ntBASIC1.91□□□□□ -2.1
RB1P06400 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.91□□□□□ -2.1
RB1P06400 UQCRBP2-201ENST00000447827 297 ntBASIC1.91□□□□□ -2.1
RB1P06400 RPS29P11-201ENST00000496507 171 ntBASIC1.91□□□□□ -2.1
RB1P06400 AC105758.1-201ENST00000506038 399 ntBASIC1.91□□□□□ -2.1
RB1P06400 MTND3P22-201ENST00000510932 243 ntBASIC1.91□□□□□ -2.1
RB1P06400 AC091144.1-201ENST00000519573 138 ntBASIC1.91□□□□□ -2.1
RB1P06400 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.91□□□□□ -2.1
RB1P06400 DNAJC19P9-201ENST00000555084 351 ntBASIC1.91□□□□□ -2.1
RB1P06400 LARP7P1-201ENST00000605576 316 ntBASIC1.91□□□□□ -2.1
RB1P06400 AC084781.2-201ENST00000615568 161 ntBASIC1.91□□□□□ -2.1
RB1P06400 AC087588.2-201ENST00000617667 426 ntBASIC1.91□□□□□ -2.1
RB1P06400 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.91□□□□□ -2.1
RB1P06400 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.91□□□□□ -2.1
RB1P06400 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
RB1P06400 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.9□□□□□ -2.1
RB1P06400 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.9□□□□□ -2.1
RB1P06400 RNU6-490P-201ENST00000362985 107 ntBASIC1.9□□□□□ -2.11
RB1P06400 RNU6-112P-201ENST00000363599 104 ntBASIC1.9□□□□□ -2.11
RB1P06400 RNA5SP138-201ENST00000365098 114 ntBASIC1.9□□□□□ -2.11
RB1P06400 RNU6-1040P-201ENST00000383974 107 ntBASIC1.9□□□□□ -2.11
RB1P06400 TOMM22P2-201ENST00000430735 237 ntBASIC1.9□□□□□ -2.11
RB1P06400 AC236972.2-201ENST00000434979 310 ntBASIC1.9□□□□□ -2.11
RB1P06400 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.9□□□□□ -2.11
RB1P06400 AC010409.1-201ENST00000487382 476 ntBASIC1.9□□□□□ -2.11
RB1P06400 RNU6-107P-201ENST00000516643 102 ntBASIC1.9□□□□□ -2.11
RB1P06400 RN7SKP49-201ENST00000516675 260 ntBASIC1.9□□□□□ -2.11
RB1P06400 RNA5SP364-201ENST00000516938 78 ntBASIC1.9□□□□□ -2.11
RB1P06400 AC012493.3-201ENST00000604494 112 ntBASIC1.9□□□□□ -2.11
RB1P06400 AC010900.2-201ENST00000604508 210 ntBASIC1.9□□□□□ -2.11
RB1P06400 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.9□□□□□ -2.11
RB1P06400 AL357075.2-201ENST00000614906 189 ntBASIC1.9□□□□□ -2.11
RB1P06400 MTND5P10-201ENST00000603719 1809 ntBASIC1.89□□□□□ -2.11
RB1P06400 RNU4-73P-201ENST00000363164 141 ntBASIC1.89□□□□□ -2.11
RB1P06400 Y_RNA.269-201ENST00000364685 89 ntBASIC1.89□□□□□ -2.11
RB1P06400 SNORA25.9-201ENST00000365087 128 ntBASIC1.89□□□□□ -2.11
RB1P06400 RNU6-1240P-201ENST00000365155 104 ntBASIC1.89□□□□□ -2.11
RB1P06400 RNU6-318P-201ENST00000384283 103 ntBASIC1.89□□□□□ -2.11
RB1P06400 Y_RNA.508-201ENST00000384502 114 ntBASIC1.89□□□□□ -2.11
RB1P06400 MIR1253-201ENST00000408273 105 ntBASIC1.89□□□□□ -2.11
RB1P06400 Y_RNA.592-201ENST00000410274 109 ntBASIC1.89□□□□□ -2.11
RB1P06400 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.89□□□□□ -2.11
RB1P06400 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.89□□□□□ -2.11
RB1P06400 MRPS18CP6-201ENST00000423587 223 ntBASIC1.89□□□□□ -2.11
RB1P06400 AC099799.1-201ENST00000439809 192 ntBASIC1.89□□□□□ -2.11
RB1P06400 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.89□□□□□ -2.11
RB1P06400 MIR4303-201ENST00000581299 66 ntBASIC1.89□□□□□ -2.11
RB1P06400 MIR3935-201ENST00000583472 104 ntBASIC1.89□□□□□ -2.11
RB1P06400 AL512598.1-201ENST00000610158 273 ntBASIC1.89□□□□□ -2.11
RB1P06400 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.89□□□□□ -2.11
RB1P06400 AL008636.1-201ENST00000625038 1018 ntBASIC1.89□□□□□ -2.11
RB1P06400 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
RB1P06400 RNU6-1301P-201ENST00000362724 104 ntBASIC1.88□□□□□ -2.11
RB1P06400 Y_RNA.187-201ENST00000363918 113 ntBASIC1.88□□□□□ -2.11
RB1P06400 RNU6-1019P-201ENST00000364424 107 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms