Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DOAP06340 U3.9-201ENST00000363823 204 ntBASIC2.8□□□□□ -1.96
HLA-DOAP06340 AL139095.1-201ENST00000404326 391 ntBASIC2.8□□□□□ -1.96
HLA-DOAP06340 Y_RNA.597-201ENST00000410463 100 ntBASIC2.8□□□□□ -1.96
HLA-DOAP06340 AC024067.1-201ENST00000426199 223 ntBASIC2.8□□□□□ -1.96
HLA-DOAP06340 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.8□□□□□ -1.96
HLA-DOAP06340 AL121890.1-201ENST00000435457 205 ntBASIC2.8□□□□□ -1.96
HLA-DOAP06340 MIR449C-201ENST00000516047 92 ntBASIC2.8□□□□□ -1.96
HLA-DOAP06340 RNU2-44P-201ENST00000516795 194 ntBASIC2.8□□□□□ -1.96
HLA-DOAP06340 AC103810.1-201ENST00000579873 453 ntBASIC2.8□□□□□ -1.96
HLA-DOAP06340 AL356575.1-201ENST00000603008 283 ntBASIC2.8□□□□□ -1.96
HLA-DOAP06340 AL008718.3-201ENST00000610217 321 ntBASIC2.8□□□□□ -1.96
HLA-DOAP06340 AC090517.3-201ENST00000625170 141 ntBASIC2.8□□□□□ -1.96
HLA-DOAP06340 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
HLA-DOAP06340 AC068700.1-201ENST00000565862 3754 ntBASIC2.8□□□□□ -1.96
HLA-DOAP06340 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
HLA-DOAP06340 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
HLA-DOAP06340 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
HLA-DOAP06340 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HLA-DOAP06340 RNU6-1020P-201ENST00000363684 107 ntBASIC2.79□□□□□ -1.96
HLA-DOAP06340 RNA5SP475-201ENST00000410568 110 ntBASIC2.79□□□□□ -1.96
HLA-DOAP06340 RN7SKP223-201ENST00000410582 62 ntBASIC2.79□□□□□ -1.96
HLA-DOAP06340 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.79□□□□□ -1.96
HLA-DOAP06340 AL135790.2-201ENST00000437701 267 ntBASIC2.79□□□□□ -1.96
HLA-DOAP06340 RPS12P2-201ENST00000439728 269 ntBASIC2.79□□□□□ -1.96
HLA-DOAP06340 NDUFB4P10-201ENST00000452541 359 ntBASIC2.79□□□□□ -1.96
HLA-DOAP06340 RPS29P12-201ENST00000460178 152 ntBASIC2.79□□□□□ -1.96
HLA-DOAP06340 YWHAEP4-201ENST00000505390 198 ntBASIC2.79□□□□□ -1.96
HLA-DOAP06340 HMGB3P3-201ENST00000510526 400 ntBASIC2.79□□□□□ -1.96
HLA-DOAP06340 RNU6-436P-201ENST00000516171 114 ntBASIC2.79□□□□□ -1.96
HLA-DOAP06340 RNU2-12P-201ENST00000517216 168 ntBASIC2.79□□□□□ -1.96
HLA-DOAP06340 AL133393.1-201ENST00000603277 287 ntBASIC2.79□□□□□ -1.96
HLA-DOAP06340 AC067747.1-201ENST00000608026 250 ntBASIC2.79□□□□□ -1.96
HLA-DOAP06340 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.79□□□□□ -1.96
HLA-DOAP06340 AC021753.1-201ENST00000635724 168 ntBASIC2.79□□□□□ -1.96
HLA-DOAP06340 U2.22-201ENST00000636441 106 ntBASIC2.79□□□□□ -1.96
HLA-DOAP06340 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
HLA-DOAP06340 AC092435.3-201ENST00000565538 3654 ntBASIC2.79□□□□□ -1.96
HLA-DOAP06340 RNA5SP139-201ENST00000364340 117 ntBASIC2.78□□□□□ -1.96
HLA-DOAP06340 RNU6-1083P-201ENST00000384022 107 ntBASIC2.78□□□□□ -1.96
HLA-DOAP06340 RNU6-211P-201ENST00000384047 107 ntBASIC2.78□□□□□ -1.96
HLA-DOAP06340 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.78□□□□□ -1.96
HLA-DOAP06340 CYCSP23-201ENST00000519781 313 ntBASIC2.78□□□□□ -1.96
HLA-DOAP06340 AC104984.5-201ENST00000586878 94 ntBASIC2.78□□□□□ -1.96
HLA-DOAP06340 Z83818.1-201ENST00000603584 150 ntBASIC2.78□□□□□ -1.96
HLA-DOAP06340 TCL6_2.1-201ENST00000615162 119 ntBASIC2.78□□□□□ -1.96
HLA-DOAP06340 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.78□□□□□ -1.97
HLA-DOAP06340 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.77□□□□□ -1.97
HLA-DOAP06340 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.77□□□□□ -1.97
HLA-DOAP06340 AL157777.2-201ENST00000258070 137 ntBASIC2.77□□□□□ -1.97
HLA-DOAP06340 RNU5F-3P-201ENST00000363767 117 ntBASIC2.77□□□□□ -1.97
HLA-DOAP06340 RNU6-324P-201ENST00000363957 106 ntBASIC2.77□□□□□ -1.97
HLA-DOAP06340 SNORA67.2-201ENST00000384300 149 ntBASIC2.77□□□□□ -1.97
HLA-DOAP06340 U3.40-201ENST00000408706 208 ntBASIC2.77□□□□□ -1.97
HLA-DOAP06340 RNA5SP344-201ENST00000411081 104 ntBASIC2.77□□□□□ -1.97
HLA-DOAP06340 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.77□□□□□ -1.97
HLA-DOAP06340 BTF3P11-201ENST00000426582 477 ntBASIC2.77□□□□□ -1.97
HLA-DOAP06340 AC090515.1-201ENST00000465295 476 ntBASIC2.77□□□□□ -1.97
HLA-DOAP06340 COX6CP14-201ENST00000469580 174 ntBASIC2.77□□□□□ -1.97
HLA-DOAP06340 RPS27AP9-201ENST00000477681 438 ntBASIC2.77□□□□□ -1.97
HLA-DOAP06340 RPS29P21-201ENST00000496272 170 ntBASIC2.77□□□□□ -1.97
HLA-DOAP06340 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.77□□□□□ -1.97
HLA-DOAP06340 RNA5SP112-201ENST00000515937 99 ntBASIC2.77□□□□□ -1.97
HLA-DOAP06340 RNU6-1219P-201ENST00000516143 112 ntBASIC2.77□□□□□ -1.97
HLA-DOAP06340 MIR1273D-201ENST00000577266 86 ntBASIC2.77□□□□□ -1.97
HLA-DOAP06340 MIR6715A-201ENST00000615929 79 ntBASIC2.77□□□□□ -1.97
HLA-DOAP06340 AL365265.1-201ENST00000621045 234 ntBASIC2.77□□□□□ -1.97
HLA-DOAP06340 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
HLA-DOAP06340 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DOAP06340 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
HLA-DOAP06340 RNU1-72P-201ENST00000362976 153 ntBASIC2.76□□□□□ -1.97
HLA-DOAP06340 Y_RNA.506-201ENST00000384494 102 ntBASIC2.76□□□□□ -1.97
HLA-DOAP06340 RNU6-125P-201ENST00000384505 107 ntBASIC2.76□□□□□ -1.97
HLA-DOAP06340 RPL30P4-201ENST00000429309 333 ntBASIC2.76□□□□□ -1.97
HLA-DOAP06340 U8.19-201ENST00000459095 133 ntBASIC2.76□□□□□ -1.97
HLA-DOAP06340 Y_RNA.637-201ENST00000459424 114 ntBASIC2.76□□□□□ -1.97
HLA-DOAP06340 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.76□□□□□ -1.97
HLA-DOAP06340 RNA5SP76-201ENST00000516277 87 ntBASIC2.76□□□□□ -1.97
HLA-DOAP06340 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.76□□□□□ -1.97
HLA-DOAP06340 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.76□□□□□ -1.97
HLA-DOAP06340 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.76□□□□□ -1.97
HLA-DOAP06340 MIR4648-201ENST00000580107 72 ntBASIC2.76□□□□□ -1.97
HLA-DOAP06340 MIR3124-201ENST00000582636 67 ntBASIC2.76□□□□□ -1.97
HLA-DOAP06340 MIR5007-201ENST00000583098 95 ntBASIC2.76□□□□□ -1.97
HLA-DOAP06340 SNORD11B-201ENST00000607707 90 ntBASIC2.76□□□□□ -1.97
HLA-DOAP06340 AC104465.1-201ENST00000611365 139 ntBASIC2.76□□□□□ -1.97
HLA-DOAP06340 AC073349.3-201ENST00000617616 186 ntBASIC2.76□□□□□ -1.97
HLA-DOAP06340 MIR6873-201ENST00000622788 63 ntBASIC2.76□□□□□ -1.97
HLA-DOAP06340 AC068205.3-201ENST00000636385 468 ntBASIC2.76□□□□□ -1.97
HLA-DOAP06340 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
HLA-DOAP06340 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.75□□□□□ -1.97
HLA-DOAP06340 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
HLA-DOAP06340 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
HLA-DOAP06340 RNU6-1272P-201ENST00000362776 107 ntBASIC2.75□□□□□ -1.97
HLA-DOAP06340 RNU6-653P-201ENST00000363074 106 ntBASIC2.75□□□□□ -1.97
HLA-DOAP06340 RNU6-1048P-201ENST00000364054 107 ntBASIC2.75□□□□□ -1.97
HLA-DOAP06340 RNU6-1264P-201ENST00000383891 107 ntBASIC2.75□□□□□ -1.97
HLA-DOAP06340 Y_RNA.464-201ENST00000384282 110 ntBASIC2.75□□□□□ -1.97
HLA-DOAP06340 MIR548B-201ENST00000385247 97 ntBASIC2.75□□□□□ -1.97
HLA-DOAP06340 MIR320B2-201ENST00000408479 138 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms