Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC087854.1-201ENST00000519706 414 ntBASIC0.27□□□□□ -2.37
HLA-DQB2P05538 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.27□□□□□ -2.37
HLA-DQB2P05538 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.27□□□□□ -2.37
HLA-DQB2P05538 AC011195.1-201ENST00000578177 177 ntBASIC0.27□□□□□ -2.37
HLA-DQB2P05538 CPDP1-201ENST00000579660 283 ntBASIC0.27□□□□□ -2.37
HLA-DQB2P05538 MIR8076-201ENST00000611401 83 ntBASIC0.27□□□□□ -2.37
HLA-DQB2P05538 AC093913.1-201ENST00000614178 329 ntBASIC0.27□□□□□ -2.37
HLA-DQB2P05538 SEPT14P17-201ENST00000617978 177 ntBASIC0.27□□□□□ -2.37
HLA-DQB2P05538 AC006435.5-201ENST00000624486 112 ntBASIC0.27□□□□□ -2.37
HLA-DQB2P05538 MIR6516-201ENST00000630554 81 ntBASIC0.27□□□□□ -2.37
HLA-DQB2P05538 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
HLA-DQB2P05538 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.26□□□□□ -2.37
HLA-DQB2P05538 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
HLA-DQB2P05538 RNU1-119P-201ENST00000391122 165 ntBASIC0.26□□□□□ -2.37
HLA-DQB2P05538 MTCO2P11-201ENST00000431069 680 ntBASIC0.26□□□□□ -2.37
HLA-DQB2P05538 MTCO1P19-201ENST00000443487 500 ntBASIC0.26□□□□□ -2.37
HLA-DQB2P05538 SNORD65B-201ENST00000459126 73 ntBASIC0.26□□□□□ -2.37
HLA-DQB2P05538 AP000870.1-201ENST00000472927 406 ntBASIC0.26□□□□□ -2.37
HLA-DQB2P05538 MTND3P3-201ENST00000505004 126 ntBASIC0.26□□□□□ -2.37
HLA-DQB2P05538 RNU2-56P-201ENST00000516826 190 ntBASIC0.26□□□□□ -2.37
HLA-DQB2P05538 MTND4P7-201ENST00000523876 130 ntBASIC0.26□□□□□ -2.37
HLA-DQB2P05538 AC027288.2-201ENST00000553028 243 ntBASIC0.26□□□□□ -2.37
HLA-DQB2P05538 7SK.7-201ENST00000603504 247 ntBASIC0.26□□□□□ -2.37
HLA-DQB2P05538 AC122133.1-201ENST00000613964 233 ntBASIC0.26□□□□□ -2.37
HLA-DQB2P05538 MTND5P16-201ENST00000460269 1703 ntBASIC0.26□□□□□ -2.37
HLA-DQB2P05538 RNU4-21P-201ENST00000362802 126 ntBASIC0.25□□□□□ -2.37
HLA-DQB2P05538 RNU6-727P-201ENST00000363592 107 ntBASIC0.25□□□□□ -2.37
HLA-DQB2P05538 RNU6-553P-201ENST00000364047 96 ntBASIC0.25□□□□□ -2.37
HLA-DQB2P05538 Y_RNA.267-201ENST00000364679 109 ntBASIC0.25□□□□□ -2.37
HLA-DQB2P05538 RNY1P8-201ENST00000383970 114 ntBASIC0.25□□□□□ -2.37
HLA-DQB2P05538 Y_RNA.508-201ENST00000384502 114 ntBASIC0.25□□□□□ -2.37
HLA-DQB2P05538 MIR521-1-201ENST00000384902 87 ntBASIC0.25□□□□□ -2.37
HLA-DQB2P05538 MTATP6P18-201ENST00000417994 673 ntBASIC0.25□□□□□ -2.37
HLA-DQB2P05538 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC0.25□□□□□ -2.37
HLA-DQB2P05538 AC093019.1-201ENST00000443135 252 ntBASIC0.25□□□□□ -2.37
HLA-DQB2P05538 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.25□□□□□ -2.37
HLA-DQB2P05538 snoU13.18-201ENST00000459483 104 ntBASIC0.25□□□□□ -2.37
HLA-DQB2P05538 AC002350.1-201ENST00000490759 375 ntBASIC0.25□□□□□ -2.37
HLA-DQB2P05538 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.25□□□□□ -2.37
HLA-DQB2P05538 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.25□□□□□ -2.37
HLA-DQB2P05538 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.25□□□□□ -2.37
HLA-DQB2P05538 AC017083.3-201ENST00000609955 700 ntBASIC0.25□□□□□ -2.37
HLA-DQB2P05538 AC007014.2-201ENST00000615581 479 ntBASIC0.25□□□□□ -2.37
HLA-DQB2P05538 AC103705.1-201ENST00000619013 241 ntBASIC0.25□□□□□ -2.37
HLA-DQB2P05538 AC079248.2-201ENST00000623779 326 ntBASIC0.25□□□□□ -2.37
HLA-DQB2P05538 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.25□□□□□ -2.37
HLA-DQB2P05538 AC100810.6-201ENST00000638068 285 ntBASIC0.25□□□□□ -2.37
HLA-DQB2P05538 MIR103A2-201ENST00000362154 78 ntBASIC0.24□□□□□ -2.37
HLA-DQB2P05538 Y_RNA.159-201ENST00000363674 87 ntBASIC0.24□□□□□ -2.37
HLA-DQB2P05538 Y_RNA.796-201ENST00000364268 102 ntBASIC0.24□□□□□ -2.37
HLA-DQB2P05538 Y_RNA.269-201ENST00000364685 89 ntBASIC0.24□□□□□ -2.37
HLA-DQB2P05538 Y_RNA.799-201ENST00000364992 102 ntBASIC0.24□□□□□ -2.37
HLA-DQB2P05538 Y_RNA.415-201ENST00000384012 112 ntBASIC0.24□□□□□ -2.37
HLA-DQB2P05538 RNU6-1067P-201ENST00000384752 107 ntBASIC0.24□□□□□ -2.37
HLA-DQB2P05538 MIR1185-1-201ENST00000408598 86 ntBASIC0.24□□□□□ -2.37
HLA-DQB2P05538 RNU6-325P-201ENST00000411132 105 ntBASIC0.24□□□□□ -2.37
HLA-DQB2P05538 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.24□□□□□ -2.37
HLA-DQB2P05538 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.24□□□□□ -2.37
HLA-DQB2P05538 AC092989.1-201ENST00000481235 277 ntBASIC0.24□□□□□ -2.37
HLA-DQB2P05538 AC010469.2-201ENST00000496412 480 ntBASIC0.24□□□□□ -2.37
HLA-DQB2P05538 AC097462.1-201ENST00000514125 324 ntBASIC0.24□□□□□ -2.37
HLA-DQB2P05538 SNORA68.3-201ENST00000515906 83 ntBASIC0.24□□□□□ -2.37
HLA-DQB2P05538 RNU6-189P-201ENST00000516120 101 ntBASIC0.24□□□□□ -2.37
HLA-DQB2P05538 SCARNA1-201ENST00000517138 166 ntBASIC0.24□□□□□ -2.37
HLA-DQB2P05538 AL157687.1-201ENST00000554853 619 ntBASIC0.24□□□□□ -2.37
HLA-DQB2P05538 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.24□□□□□ -2.37
HLA-DQB2P05538 AC091178.2-201ENST00000584401 117 ntBASIC0.24□□□□□ -2.37
HLA-DQB2P05538 RNU6-94P-201ENST00000607728 107 ntBASIC0.24□□□□□ -2.37
HLA-DQB2P05538 AC016597.2-201ENST00000613256 341 ntBASIC0.24□□□□□ -2.37
HLA-DQB2P05538 MTND4P12-201ENST00000498999 1377 ntBASIC0.23□□□□□ -2.37
HLA-DQB2P05538 FGF7P2-201ENST00000332473 296 ntBASIC0.23□□□□□ -2.37
HLA-DQB2P05538 SNORA1B-201ENST00000362535 133 ntBASIC0.23□□□□□ -2.37
HLA-DQB2P05538 SNORA25.3-201ENST00000363205 127 ntBASIC0.23□□□□□ -2.37
HLA-DQB2P05538 RNY1-201ENST00000364228 113 ntBASIC0.23□□□□□ -2.37
HLA-DQB2P05538 Y_RNA.336-201ENST00000365307 109 ntBASIC0.23□□□□□ -2.37
HLA-DQB2P05538 RNU6-996P-201ENST00000365438 107 ntBASIC0.23□□□□□ -2.37
HLA-DQB2P05538 MIR598-201ENST00000384868 97 ntBASIC0.23□□□□□ -2.37
HLA-DQB2P05538 RNA5SP482-201ENST00000391269 118 ntBASIC0.23□□□□□ -2.37
HLA-DQB2P05538 RNA5SP511-201ENST00000410487 115 ntBASIC0.23□□□□□ -2.37
HLA-DQB2P05538 MTCO3P19-201ENST00000415864 321 ntBASIC0.23□□□□□ -2.37
HLA-DQB2P05538 MRPS18CP6-201ENST00000423587 223 ntBASIC0.23□□□□□ -2.37
HLA-DQB2P05538 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.23□□□□□ -2.37
HLA-DQB2P05538 MTCO2P18-201ENST00000457151 658 ntBASIC0.23□□□□□ -2.37
HLA-DQB2P05538 RNU7-125P-201ENST00000458760 62 ntBASIC0.23□□□□□ -2.37
HLA-DQB2P05538 HMGN2P26-201ENST00000463169 339 ntBASIC0.23□□□□□ -2.37
HLA-DQB2P05538 AC091021.1-201ENST00000468051 388 ntBASIC0.23□□□□□ -2.37
HLA-DQB2P05538 MTND1P22-201ENST00000510572 951 ntBASIC0.23□□□□□ -2.37
HLA-DQB2P05538 Y_RNA.673-201ENST00000516306 88 ntBASIC0.23□□□□□ -2.37
HLA-DQB2P05538 SNORA25.14-201ENST00000516481 132 ntBASIC0.23□□□□□ -2.37
HLA-DQB2P05538 RNA5SP134-201ENST00000516492 96 ntBASIC0.23□□□□□ -2.37
HLA-DQB2P05538 RNU6-341P-201ENST00000516973 96 ntBASIC0.23□□□□□ -2.37
HLA-DQB2P05538 RNU6-232P-201ENST00000517144 64 ntBASIC0.23□□□□□ -2.37
HLA-DQB2P05538 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.23□□□□□ -2.37
HLA-DQB2P05538 AP001372.4-201ENST00000524889 472 ntBASIC0.23□□□□□ -2.37
HLA-DQB2P05538 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.23□□□□□ -2.37
HLA-DQB2P05538 AF246928.1-201ENST00000623768 87 ntBASIC0.23□□□□□ -2.37
HLA-DQB2P05538 AC005609.4-201ENST00000625071 447 ntBASIC0.23□□□□□ -2.37
HLA-DQB2P05538 MIRLET7D-201ENST00000362263 87 ntBASIC0.22□□□□□ -2.37
HLA-DQB2P05538 MIR562-201ENST00000384894 95 ntBASIC0.22□□□□□ -2.37
HLA-DQB2P05538 RNU2-70P-201ENST00000410718 179 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms