Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 RNU6-46P-201ENST00000383860 107 ntBASIC-1.05□□□□□ -2.58
HMGN1P05114 RNU6-224P-201ENST00000384055 107 ntBASIC-1.05□□□□□ -2.58
HMGN1P05114 AL355143.1-201ENST00000407101 841 ntBASIC-1.05□□□□□ -2.58
HMGN1P05114 AC098592.1-201ENST00000419352 333 ntBASIC-1.05□□□□□ -2.58
HMGN1P05114 MTCO2P23-201ENST00000425216 680 ntBASIC-1.05□□□□□ -2.58
HMGN1P05114 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-1.05□□□□□ -2.58
HMGN1P05114 RPS24P1-201ENST00000438550 371 ntBASIC-1.05□□□□□ -2.58
HMGN1P05114 MTND1P17-201ENST00000448961 204 ntBASIC-1.05□□□□□ -2.58
HMGN1P05114 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-1.05□□□□□ -2.58
HMGN1P05114 AC107934.1-201ENST00000522215 217 ntBASIC-1.05□□□□□ -2.58
HMGN1P05114 SNORA1B-201ENST00000362535 133 ntBASIC-1.06□□□□□ -2.58
HMGN1P05114 SNORA36.1-201ENST00000363424 132 ntBASIC-1.06□□□□□ -2.58
HMGN1P05114 RNU6-560P-201ENST00000364007 108 ntBASIC-1.06□□□□□ -2.58
HMGN1P05114 SNORA67.2-201ENST00000384300 149 ntBASIC-1.06□□□□□ -2.58
HMGN1P05114 MIR15B-201ENST00000385045 98 ntBASIC-1.06□□□□□ -2.58
HMGN1P05114 MTND4P3-201ENST00000417829 541 ntBASIC-1.06□□□□□ -2.58
HMGN1P05114 AC010493.1-201ENST00000513479 292 ntBASIC-1.06□□□□□ -2.58
HMGN1P05114 RNU4-49P-201ENST00000516080 140 ntBASIC-1.06□□□□□ -2.58
HMGN1P05114 AC010376.1-201ENST00000522101 334 ntBASIC-1.06□□□□□ -2.58
HMGN1P05114 MIR4676-201ENST00000583078 72 ntBASIC-1.06□□□□□ -2.58
HMGN1P05114 AC096720.1-201ENST00000604441 183 ntBASIC-1.06□□□□□ -2.58
HMGN1P05114 AC027279.3-201ENST00000625055 122 ntBASIC-1.06□□□□□ -2.58
HMGN1P05114 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-1.06□□□□□ -2.58
HMGN1P05114 MIR101-1-201ENST00000362265 75 ntBASIC-1.07□□□□□ -2.58
HMGN1P05114 RNU6-341P-201ENST00000516973 96 ntBASIC-1.07□□□□□ -2.58
HMGN1P05114 AC090897.1-201ENST00000580909 226 ntBASIC-1.07□□□□□ -2.58
HMGN1P05114 AC120024.3-201ENST00000603167 156 ntBASIC-1.07□□□□□ -2.58
HMGN1P05114 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-1.07□□□□□ -2.58
HMGN1P05114 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-1.08□□□□□ -2.58
HMGN1P05114 RNU4-84P-201ENST00000364200 139 ntBASIC-1.08□□□□□ -2.58
HMGN1P05114 RNA5SP117-201ENST00000365294 118 ntBASIC-1.08□□□□□ -2.58
HMGN1P05114 RNU6-723P-201ENST00000383973 107 ntBASIC-1.08□□□□□ -2.58
HMGN1P05114 MIR320B2-201ENST00000408479 138 ntBASIC-1.08□□□□□ -2.58
HMGN1P05114 RNA5SP451-201ENST00000410588 110 ntBASIC-1.08□□□□□ -2.58
HMGN1P05114 RPS26P42-201ENST00000413485 326 ntBASIC-1.08□□□□□ -2.58
HMGN1P05114 EXOSC3P1-201ENST00000448649 500 ntBASIC-1.08□□□□□ -2.58
HMGN1P05114 AL031274.1-201ENST00000450334 232 ntBASIC-1.08□□□□□ -2.58
HMGN1P05114 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-1.08□□□□□ -2.58
HMGN1P05114 RNU6-430P-201ENST00000517078 107 ntBASIC-1.08□□□□□ -2.58
HMGN1P05114 RNU6-1028P-201ENST00000517164 93 ntBASIC-1.08□□□□□ -2.58
HMGN1P05114 RPL21P9-201ENST00000556149 474 ntBASIC-1.08□□□□□ -2.58
HMGN1P05114 MIR6779-201ENST00000617283 64 ntBASIC-1.08□□□□□ -2.58
HMGN1P05114 MIR4251-201ENST00000635819 61 ntBASIC-1.08□□□□□ -2.58
HMGN1P05114 RNU6-396P-201ENST00000365369 105 ntBASIC-1.09□□□□□ -2.58
HMGN1P05114 MIR136-201ENST00000385207 82 ntBASIC-1.09□□□□□ -2.58
HMGN1P05114 RNU6-387P-201ENST00000411331 105 ntBASIC-1.09□□□□□ -2.58
HMGN1P05114 MTND4P32-201ENST00000437189 1237 ntBASIC-1.09□□□□□ -2.58
HMGN1P05114 MTND4P19-201ENST00000446659 478 ntBASIC-1.09□□□□□ -2.58
HMGN1P05114 MRPS10P1-201ENST00000448483 130 ntBASIC-1.09□□□□□ -2.58
HMGN1P05114 AC007215.1-201ENST00000464893 276 ntBASIC-1.09□□□□□ -2.58
HMGN1P05114 RNU6-334P-201ENST00000517072 102 ntBASIC-1.09□□□□□ -2.58
HMGN1P05114 RNU6-201P-201ENST00000517100 61 ntBASIC-1.09□□□□□ -2.58
HMGN1P05114 AC026371.1-201ENST00000551867 419 ntBASIC-1.09□□□□□ -2.58
HMGN1P05114 AC005776.1-201ENST00000603164 290 ntBASIC-1.09□□□□□ -2.58
HMGN1P05114 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-1.09□□□□□ -2.58
HMGN1P05114 MIR4788-201ENST00000639104 80 ntBASIC-1.09□□□□□ -2.58
HMGN1P05114 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-1.09□□□□□ -2.58
HMGN1P05114 RNU6-137P-201ENST00000363680 108 ntBASIC-1.1□□□□□ -2.59
HMGN1P05114 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-1.1□□□□□ -2.59
HMGN1P05114 RNA5SP163-201ENST00000410304 99 ntBASIC-1.1□□□□□ -2.59
HMGN1P05114 AC015818.7-201ENST00000428754 109 ntBASIC-1.1□□□□□ -2.59
HMGN1P05114 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-1.1□□□□□ -2.59
HMGN1P05114 AC087499.7-201ENST00000441958 109 ntBASIC-1.1□□□□□ -2.59
HMGN1P05114 AC007327.1-201ENST00000447461 264 ntBASIC-1.1□□□□□ -2.59
HMGN1P05114 AC087499.4-201ENST00000448505 178 ntBASIC-1.1□□□□□ -2.59
HMGN1P05114 RPS29P15-201ENST00000458329 171 ntBASIC-1.1□□□□□ -2.59
HMGN1P05114 AC114755.3-201ENST00000481111 251 ntBASIC-1.1□□□□□ -2.59
HMGN1P05114 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-1.1□□□□□ -2.59
HMGN1P05114 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-1.1□□□□□ -2.59
HMGN1P05114 AC133485.4-201ENST00000561835 220 ntBASIC-1.1□□□□□ -2.59
HMGN1P05114 FRG2DP-202ENST00000566967 323 ntBASIC-1.1□□□□□ -2.59
HMGN1P05114 AC246785.4-201ENST00000605374 287 ntBASIC-1.1□□□□□ -2.59
HMGN1P05114 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-1.1□□□□□ -2.59
HMGN1P05114 MIR499B-201ENST00000636498 73 ntBASIC-1.1□□□□□ -2.59
HMGN1P05114 SNORA72.1-201ENST00000363485 129 ntBASIC-1.11□□□□□ -2.59
HMGN1P05114 RNU6-652P-201ENST00000365488 107 ntBASIC-1.11□□□□□ -2.59
HMGN1P05114 Y_RNA.549-201ENST00000384657 102 ntBASIC-1.11□□□□□ -2.59
HMGN1P05114 MIR938-201ENST00000401216 83 ntBASIC-1.11□□□□□ -2.59
HMGN1P05114 MIR1298-201ENST00000408783 112 ntBASIC-1.11□□□□□ -2.59
HMGN1P05114 RNU2-39P-201ENST00000410604 198 ntBASIC-1.11□□□□□ -2.59
HMGN1P05114 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-1.11□□□□□ -2.59
HMGN1P05114 MLLT10P1-201ENST00000418346 262 ntBASIC-1.11□□□□□ -2.59
HMGN1P05114 AC243428.1-201ENST00000421099 264 ntBASIC-1.11□□□□□ -2.59
HMGN1P05114 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-1.11□□□□□ -2.59
HMGN1P05114 SNORA18.7-201ENST00000516910 131 ntBASIC-1.11□□□□□ -2.59
HMGN1P05114 AC019226.2-201ENST00000625973 424 ntBASIC-1.11□□□□□ -2.59
HMGN1P05114 MIR377-201ENST00000362145 69 ntBASIC-1.12□□□□□ -2.59
HMGN1P05114 RNU6-827P-201ENST00000365553 106 ntBASIC-1.12□□□□□ -2.59
HMGN1P05114 MIR516B2-201ENST00000385190 85 ntBASIC-1.12□□□□□ -2.59
HMGN1P05114 AL049545.1-201ENST00000401856 572 ntBASIC-1.12□□□□□ -2.59
HMGN1P05114 SNORD75.1-201ENST00000408373 60 ntBASIC-1.12□□□□□ -2.59
HMGN1P05114 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC-1.12□□□□□ -2.59
HMGN1P05114 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-1.12□□□□□ -2.59
HMGN1P05114 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-1.12□□□□□ -2.59
HMGN1P05114 RNU6-344P-201ENST00000516635 111 ntBASIC-1.12□□□□□ -2.59
HMGN1P05114 RNU6-685P-201ENST00000517088 95 ntBASIC-1.12□□□□□ -2.59
HMGN1P05114 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-1.12□□□□□ -2.59
HMGN1P05114 RNU6-580P-201ENST00000365159 107 ntBASIC-1.13□□□□□ -2.59
HMGN1P05114 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-1.13□□□□□ -2.59
HMGN1P05114 PIGPP3-201ENST00000425307 415 ntBASIC-1.13□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms