Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 RNU6-416P-201ENST00000516265 103 ntBASIC-0.82□□□□□ -2.54
APOBP04114 RNU7-43P-201ENST00000516554 64 ntBASIC-0.82□□□□□ -2.54
APOBP04114 RNU7-156P-201ENST00000517214 74 ntBASIC-0.82□□□□□ -2.54
APOBP04114 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC-0.82□□□□□ -2.54
APOBP04114 AC234772.3-201ENST00000602277 528 ntBASIC-0.82□□□□□ -2.54
APOBP04114 AL139286.2-201ENST00000606838 396 ntBASIC-0.82□□□□□ -2.54
APOBP04114 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC-0.82□□□□□ -2.54
APOBP04114 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.82□□□□□ -2.54
APOBP04114 Y_RNA.287-201ENST00000364853 94 ntBASIC-0.82□□□□□ -2.54
APOBP04114 RNU6-650P-201ENST00000365658 111 ntBASIC-0.82□□□□□ -2.54
APOBP04114 RNU6-528P-201ENST00000516926 100 ntBASIC-0.82□□□□□ -2.54
APOBP04114 SGO1P1-201ENST00000603525 1447 ntBASIC-0.82□□□□□ -2.54
APOBP04114 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.82□□□□□ -2.54
APOBP04114 RNU5E-8P-201ENST00000363502 116 ntBASIC-0.82□□□□□ -2.54
APOBP04114 SNORA2B-201ENST00000384583 137 ntBASIC-0.82□□□□□ -2.54
APOBP04114 U8.16-201ENST00000391279 133 ntBASIC-0.82□□□□□ -2.54
APOBP04114 AL392103.1-201ENST00000447000 198 ntBASIC-0.82□□□□□ -2.54
APOBP04114 RPS29P27-201ENST00000463711 170 ntBASIC-0.82□□□□□ -2.54
APOBP04114 RNU6-980P-201ENST00000516925 103 ntBASIC-0.82□□□□□ -2.54
APOBP04114 SNORA74.3-201ENST00000517108 154 ntBASIC-0.82□□□□□ -2.54
APOBP04114 MIR7107-201ENST00000611489 80 ntBASIC-0.82□□□□□ -2.54
APOBP04114 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.82□□□□□ -2.54
APOBP04114 SCARNA4-201ENST00000629045 128 ntBASIC-0.82□□□□□ -2.54
APOBP04114 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.83□□□□□ -2.54
APOBP04114 SNORA12-201ENST00000391162 147 ntBASIC-0.83□□□□□ -2.54
APOBP04114 MTCO1P17-201ENST00000411522 491 ntBASIC-0.83□□□□□ -2.54
APOBP04114 AC016907.1-201ENST00000419483 435 ntBASIC-0.83□□□□□ -2.54
APOBP04114 AC104073.1-201ENST00000451988 151 ntBASIC-0.83□□□□□ -2.54
APOBP04114 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC-0.83□□□□□ -2.54
APOBP04114 HSPE1P23-201ENST00000509838 286 ntBASIC-0.83□□□□□ -2.54
APOBP04114 AL390123.1-201ENST00000603216 237 ntBASIC-0.83□□□□□ -2.54
APOBP04114 RNU4-21P-201ENST00000362802 126 ntBASIC-0.83□□□□□ -2.54
APOBP04114 Y_RNA.311-201ENST00000365068 96 ntBASIC-0.83□□□□□ -2.54
APOBP04114 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.83□□□□□ -2.54
APOBP04114 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.83□□□□□ -2.54
APOBP04114 CALM2P2-201ENST00000428512 440 ntBASIC-0.83□□□□□ -2.54
APOBP04114 AC011374.2-201ENST00000607135 526 ntBASIC-0.83□□□□□ -2.54
APOBP04114 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.83□□□□□ -2.54
APOBP04114 AC022137.1-201ENST00000483735 151 ntBASIC-0.83□□□□□ -2.54
APOBP04114 AC091163.3-201ENST00000518269 1144 ntBASIC-0.83□□□□□ -2.54
APOBP04114 MIR4771-2-201ENST00000577758 74 ntBASIC-0.83□□□□□ -2.54
APOBP04114 MIR4771-1-201ENST00000582617 74 ntBASIC-0.83□□□□□ -2.54
APOBP04114 AC091135.1-201ENST00000585943 307 ntBASIC-0.83□□□□□ -2.54
APOBP04114 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.84□□□□□ -2.54
APOBP04114 RNU6-1285P-201ENST00000363480 105 ntBASIC-0.84□□□□□ -2.54
APOBP04114 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.84□□□□□ -2.54
APOBP04114 MIR15B-201ENST00000385045 98 ntBASIC-0.84□□□□□ -2.54
APOBP04114 AC046134.1-201ENST00000514454 666 ntBASIC-0.84□□□□□ -2.54
APOBP04114 AC018448.1-201ENST00000552843 316 ntBASIC-0.84□□□□□ -2.54
APOBP04114 RNU6-901P-201ENST00000384593 106 ntBASIC-0.84□□□□□ -2.54
APOBP04114 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC-0.84□□□□□ -2.54
APOBP04114 RPS24P1-201ENST00000438550 371 ntBASIC-0.84□□□□□ -2.54
APOBP04114 AC022447.4-201ENST00000504053 364 ntBASIC-0.84□□□□□ -2.54
APOBP04114 MIR4676-201ENST00000583078 72 ntBASIC-0.84□□□□□ -2.54
APOBP04114 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-0.84□□□□□ -2.54
APOBP04114 FABP5P15-201ENST00000453566 214 ntBASIC-0.84□□□□□ -2.54
APOBP04114 AC107401.1-201ENST00000503426 685 ntBASIC-0.84□□□□□ -2.54
APOBP04114 RNU6-143P-201ENST00000516942 93 ntBASIC-0.84□□□□□ -2.54
APOBP04114 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.84□□□□□ -2.54
APOBP04114 AC012433.1-201ENST00000588916 398 ntBASIC-0.84□□□□□ -2.54
APOBP04114 SNORA28-201ENST00000606769 126 ntBASIC-0.84□□□□□ -2.54
APOBP04114 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.84□□□□□ -2.54
APOBP04114 MIR891A-201ENST00000401237 79 ntBASIC-0.84□□□□□ -2.54
APOBP04114 AC019178.2-201ENST00000423595 505 ntBASIC-0.84□□□□□ -2.54
APOBP04114 AC245047.3-201ENST00000429428 127 ntBASIC-0.84□□□□□ -2.54
APOBP04114 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-0.84□□□□□ -2.54
APOBP04114 RNU7-12P-201ENST00000516030 62 ntBASIC-0.84□□□□□ -2.54
APOBP04114 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC-0.84□□□□□ -2.54
APOBP04114 MIR6502-201ENST00000617296 76 ntBASIC-0.84□□□□□ -2.54
APOBP04114 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.84□□□□□ -2.54
APOBP04114 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.85□□□□□ -2.55
APOBP04114 MIR525-201ENST00000384978 85 ntBASIC-0.85□□□□□ -2.55
APOBP04114 VN1R88P-201ENST00000596787 292 ntBASIC-0.85□□□□□ -2.55
APOBP04114 MIR6851-201ENST00000617060 67 ntBASIC-0.85□□□□□ -2.55
APOBP04114 RNU6-490P-201ENST00000362985 107 ntBASIC-0.85□□□□□ -2.55
APOBP04114 RNU6-1167P-201ENST00000363227 94 ntBASIC-0.85□□□□□ -2.55
APOBP04114 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.85□□□□□ -2.55
APOBP04114 MIR501-201ENST00000390204 84 ntBASIC-0.85□□□□□ -2.55
APOBP04114 SNORA40C-201ENST00000391285 128 ntBASIC-0.85□□□□□ -2.55
APOBP04114 MTCYBP42-201ENST00000444653 1130 ntBASIC-0.85□□□□□ -2.55
APOBP04114 AL590396.2-201ENST00000636511 1041 ntBASIC-0.85□□□□□ -2.55
APOBP04114 RNU6-562P-201ENST00000362731 107 ntBASIC-0.85□□□□□ -2.55
APOBP04114 RNU6-226P-201ENST00000363778 107 ntBASIC-0.85□□□□□ -2.55
APOBP04114 RNU6-188P-201ENST00000364207 107 ntBASIC-0.85□□□□□ -2.55
APOBP04114 MIR215-201ENST00000384858 110 ntBASIC-0.85□□□□□ -2.55
APOBP04114 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC-0.85□□□□□ -2.55
APOBP04114 AL512326.2-201ENST00000426359 151 ntBASIC-0.85□□□□□ -2.55
APOBP04114 AC015818.7-201ENST00000428754 109 ntBASIC-0.85□□□□□ -2.55
APOBP04114 AC087499.7-201ENST00000441958 109 ntBASIC-0.85□□□□□ -2.55
APOBP04114 MTND2P38-201ENST00000522536 667 ntBASIC-0.85□□□□□ -2.55
APOBP04114 LRRC6P1-201ENST00000532188 885 ntBASIC-0.85□□□□□ -2.55
APOBP04114 MIR3925-201ENST00000584674 77 ntBASIC-0.85□□□□□ -2.55
APOBP04114 AC022217.4-201ENST00000604389 163 ntBASIC-0.85□□□□□ -2.55
APOBP04114 AC091304.10-201ENST00000641554 121 ntBASIC-0.85□□□□□ -2.55
APOBP04114 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.86□□□□□ -2.55
APOBP04114 SNORA26.5-201ENST00000391215 123 ntBASIC-0.86□□□□□ -2.55
APOBP04114 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-0.86□□□□□ -2.55
APOBP04114 ERLEC1P1-201ENST00000433806 578 ntBASIC-0.86□□□□□ -2.55
APOBP04114 RNU7-14P-201ENST00000459331 62 ntBASIC-0.86□□□□□ -2.55
APOBP04114 RNU4-18P-201ENST00000516751 149 ntBASIC-0.86□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms