Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.97
COL3A1P02461 AC233702.2-202ENST00000562547 291 ntBASIC2.71□□□□□ -1.97
COL3A1P02461 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.71□□□□□ -1.97
COL3A1P02461 MIR4498-201ENST00000577599 66 ntBASIC2.71□□□□□ -1.97
COL3A1P02461 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.97
COL3A1P02461 AC048347.1-201ENST00000624621 427 ntBASIC2.71□□□□□ -1.97
COL3A1P02461 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
COL3A1P02461 AC022336.2-201ENST00000568966 2538 ntBASIC2.71□□□□□ -1.98
COL3A1P02461 Y_RNA.23-201ENST00000362496 106 ntBASIC2.71□□□□□ -1.98
COL3A1P02461 RNU6-898P-201ENST00000365627 104 ntBASIC2.71□□□□□ -1.98
COL3A1P02461 RNU6-1310P-201ENST00000384153 107 ntBASIC2.71□□□□□ -1.98
COL3A1P02461 Y_RNA.498-201ENST00000384460 102 ntBASIC2.71□□□□□ -1.98
COL3A1P02461 AC078809.1-201ENST00000427601 140 ntBASIC2.71□□□□□ -1.98
COL3A1P02461 RNU5F-8P-201ENST00000515941 111 ntBASIC2.71□□□□□ -1.98
COL3A1P02461 HSPE1P4-201ENST00000550617 308 ntBASIC2.71□□□□□ -1.98
COL3A1P02461 MIR5571-201ENST00000577998 113 ntBASIC2.71□□□□□ -1.98
COL3A1P02461 AC103810.1-201ENST00000579873 453 ntBASIC2.71□□□□□ -1.98
COL3A1P02461 AC019159.1-201ENST00000605094 187 ntBASIC2.71□□□□□ -1.98
COL3A1P02461 MIR6845-201ENST00000613182 61 ntBASIC2.71□□□□□ -1.98
COL3A1P02461 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.71□□□□□ -1.98
COL3A1P02461 AC110491.1-201ENST00000562191 2010 ntBASIC2.7□□□□□ -1.98
COL3A1P02461 AC010680.1-201ENST00000590024 3590 ntBASIC2.7□□□□□ -1.98
COL3A1P02461 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.7□□□□□ -1.98
COL3A1P02461 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.7□□□□□ -1.98
COL3A1P02461 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
COL3A1P02461 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
COL3A1P02461 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
COL3A1P02461 SNORD56.1-201ENST00000362913 68 ntBASIC2.7□□□□□ -1.98
COL3A1P02461 Y_RNA.164-201ENST00000363709 102 ntBASIC2.7□□□□□ -1.98
COL3A1P02461 RNU6-1141P-201ENST00000364520 107 ntBASIC2.7□□□□□ -1.98
COL3A1P02461 Z98749.2-208ENST00000381646 500 ntBASIC2.7□□□□□ -1.98
COL3A1P02461 RNU6-658P-201ENST00000384606 106 ntBASIC2.7□□□□□ -1.98
COL3A1P02461 MIR544A-201ENST00000384855 91 ntBASIC2.7□□□□□ -1.98
COL3A1P02461 MIR518D-201ENST00000385014 87 ntBASIC2.7□□□□□ -1.98
COL3A1P02461 Y_RNA.586-201ENST00000391146 98 ntBASIC2.7□□□□□ -1.98
COL3A1P02461 AC008267.6-201ENST00000441664 139 ntBASIC2.7□□□□□ -1.98
COL3A1P02461 AC009237.7-201ENST00000447357 229 ntBASIC2.7□□□□□ -1.98
COL3A1P02461 SNRPGP7-201ENST00000469016 106 ntBASIC2.7□□□□□ -1.98
COL3A1P02461 HMGB1P22-201ENST00000505315 124 ntBASIC2.7□□□□□ -1.98
COL3A1P02461 RNU6-191P-201ENST00000516295 94 ntBASIC2.7□□□□□ -1.98
COL3A1P02461 RNU6-1282P-201ENST00000516735 96 ntBASIC2.7□□□□□ -1.98
COL3A1P02461 AC055872.1-201ENST00000570978 278 ntBASIC2.7□□□□□ -1.98
COL3A1P02461 FTX_3.1-201ENST00000610451 147 ntBASIC2.7□□□□□ -1.98
COL3A1P02461 SNORA43.4-201ENST00000629559 138 ntBASIC2.7□□□□□ -1.98
COL3A1P02461 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.69□□□□□ -1.98
COL3A1P02461 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.69□□□□□ -1.98
COL3A1P02461 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.69□□□□□ -1.98
COL3A1P02461 Y_RNA.75-201ENST00000362927 97 ntBASIC2.69□□□□□ -1.98
COL3A1P02461 Y_RNA.121-201ENST00000363309 113 ntBASIC2.69□□□□□ -1.98
COL3A1P02461 RNU4-84P-201ENST00000364200 139 ntBASIC2.69□□□□□ -1.98
COL3A1P02461 U8.13-201ENST00000390842 128 ntBASIC2.69□□□□□ -1.98
COL3A1P02461 AC010409.1-201ENST00000487382 476 ntBASIC2.69□□□□□ -1.98
COL3A1P02461 HSPE1P18-201ENST00000517602 280 ntBASIC2.69□□□□□ -1.98
COL3A1P02461 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.69□□□□□ -1.98
COL3A1P02461 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.69□□□□□ -1.98
COL3A1P02461 AL365222.1-201ENST00000614661 98 ntBASIC2.69□□□□□ -1.98
COL3A1P02461 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
COL3A1P02461 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
COL3A1P02461 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
COL3A1P02461 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
COL3A1P02461 Y_RNA.179-201ENST00000363844 90 ntBASIC2.68□□□□□ -1.98
COL3A1P02461 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.68□□□□□ -1.98
COL3A1P02461 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.68□□□□□ -1.98
COL3A1P02461 AC007969.2-201ENST00000441891 191 ntBASIC2.68□□□□□ -1.98
COL3A1P02461 RPS20P10-201ENST00000451209 253 ntBASIC2.68□□□□□ -1.98
COL3A1P02461 AC012308.1-201ENST00000451232 178 ntBASIC2.68□□□□□ -1.98
COL3A1P02461 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.68□□□□□ -1.98
COL3A1P02461 RNU6-625P-201ENST00000459412 107 ntBASIC2.68□□□□□ -1.98
COL3A1P02461 AC078918.1-201ENST00000498515 228 ntBASIC2.68□□□□□ -1.98
COL3A1P02461 RNA5SP309-201ENST00000516670 106 ntBASIC2.68□□□□□ -1.98
COL3A1P02461 AC021231.3-201ENST00000558497 370 ntBASIC2.68□□□□□ -1.98
COL3A1P02461 AC020895.1-201ENST00000595362 272 ntBASIC2.68□□□□□ -1.98
COL3A1P02461 SNRPGP19-201ENST00000603826 189 ntBASIC2.68□□□□□ -1.98
COL3A1P02461 Y_RNA.783-201ENST00000613546 102 ntBASIC2.68□□□□□ -1.98
COL3A1P02461 AC004467.1-201ENST00000615678 330 ntBASIC2.68□□□□□ -1.98
COL3A1P02461 Y_RNA.778-201ENST00000620203 90 ntBASIC2.68□□□□□ -1.98
COL3A1P02461 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.68□□□□□ -1.98
COL3A1P02461 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.67□□□□□ -1.98
COL3A1P02461 AC092268.1-201ENST00000342691 405 ntBASIC2.67□□□□□ -1.98
COL3A1P02461 RNU4-80P-201ENST00000363200 141 ntBASIC2.67□□□□□ -1.98
COL3A1P02461 RNU6-873P-201ENST00000363833 107 ntBASIC2.67□□□□□ -1.98
COL3A1P02461 RNU6-151P-201ENST00000364158 107 ntBASIC2.67□□□□□ -1.98
COL3A1P02461 SNORD20-201ENST00000384550 80 ntBASIC2.67□□□□□ -1.98
COL3A1P02461 MIR186-201ENST00000384988 86 ntBASIC2.67□□□□□ -1.98
COL3A1P02461 RNA5SP475-201ENST00000410568 110 ntBASIC2.67□□□□□ -1.98
COL3A1P02461 SNORD108-201ENST00000459332 71 ntBASIC2.67□□□□□ -1.98
COL3A1P02461 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.67□□□□□ -1.98
COL3A1P02461 AC018448.1-201ENST00000552843 316 ntBASIC2.67□□□□□ -1.98
COL3A1P02461 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.67□□□□□ -1.98
COL3A1P02461 RNU2-4P-201ENST00000606190 192 ntBASIC2.67□□□□□ -1.98
COL3A1P02461 MTND5P35-201ENST00000557537 1720 ntBASIC2.67□□□□□ -1.98
COL3A1P02461 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
COL3A1P02461 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
COL3A1P02461 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.67□□□□□ -1.98
COL3A1P02461 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
COL3A1P02461 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
COL3A1P02461 AC100821.1-201ENST00000523153 2479 ntBASIC2.66□□□□□ -1.98
COL3A1P02461 Y_RNA.182-201ENST00000363880 111 ntBASIC2.66□□□□□ -1.98
COL3A1P02461 RNA5SP160-201ENST00000364866 120 ntBASIC2.66□□□□□ -1.98
COL3A1P02461 Y_RNA.338-201ENST00000365320 114 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms