Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 RNA5SP347-201ENST00000362445 119 ntBASIC0.45□□□□□ -2.34
VAPBO95292 RNU6-727P-201ENST00000363592 107 ntBASIC0.45□□□□□ -2.34
VAPBO95292 RNU5F-3P-201ENST00000363767 117 ntBASIC0.45□□□□□ -2.34
VAPBO95292 RNY1P14-201ENST00000384426 108 ntBASIC0.45□□□□□ -2.34
VAPBO95292 RNY3P9-201ENST00000384727 106 ntBASIC0.45□□□□□ -2.34
VAPBO95292 AC114737.2-201ENST00000421583 173 ntBASIC0.45□□□□□ -2.34
VAPBO95292 AC098934.3-201ENST00000430450 190 ntBASIC0.45□□□□□ -2.34
VAPBO95292 OR9P1P-201ENST00000496431 281 ntBASIC0.45□□□□□ -2.34
VAPBO95292 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.45□□□□□ -2.34
VAPBO95292 RNU6-229P-201ENST00000516614 102 ntBASIC0.45□□□□□ -2.34
VAPBO95292 MTCO2P4-201ENST00000517968 247 ntBASIC0.45□□□□□ -2.34
VAPBO95292 AC018659.1-201ENST00000551083 169 ntBASIC0.45□□□□□ -2.34
VAPBO95292 SNORA4-201ENST00000584302 138 ntBASIC0.45□□□□□ -2.34
VAPBO95292 MIR5692C1-201ENST00000585309 91 ntBASIC0.45□□□□□ -2.34
VAPBO95292 AL512605.2-201ENST00000592972 256 ntBASIC0.45□□□□□ -2.34
VAPBO95292 AC009229.3-201ENST00000608056 282 ntBASIC0.45□□□□□ -2.34
VAPBO95292 AL121757.2-201ENST00000611223 313 ntBASIC0.45□□□□□ -2.34
VAPBO95292 AL391903.3-201ENST00000612158 163 ntBASIC0.45□□□□□ -2.34
VAPBO95292 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
VAPBO95292 AL442644.1-201ENST00000454390 3105 ntBASIC0.44□□□□□ -2.34
VAPBO95292 RNU6-137P-201ENST00000363680 108 ntBASIC0.44□□□□□ -2.34
VAPBO95292 SNORD18A-201ENST00000363753 72 ntBASIC0.44□□□□□ -2.34
VAPBO95292 RNU4-9P-201ENST00000364951 139 ntBASIC0.44□□□□□ -2.34
VAPBO95292 Y_RNA.319-201ENST00000365138 92 ntBASIC0.44□□□□□ -2.34
VAPBO95292 Y_RNA.415-201ENST00000384012 112 ntBASIC0.44□□□□□ -2.34
VAPBO95292 RNU6-163P-201ENST00000384396 106 ntBASIC0.44□□□□□ -2.34
VAPBO95292 MIR32-201ENST00000384965 70 ntBASIC0.44□□□□□ -2.34
VAPBO95292 RNA5SP482-201ENST00000391269 118 ntBASIC0.44□□□□□ -2.34
VAPBO95292 SNORD99-201ENST00000408612 74 ntBASIC0.44□□□□□ -2.34
VAPBO95292 AL663109.1-201ENST00000411498 844 ntBASIC0.44□□□□□ -2.34
VAPBO95292 AC073464.1-201ENST00000429823 534 ntBASIC0.44□□□□□ -2.34
VAPBO95292 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.44□□□□□ -2.34
VAPBO95292 U7.7-201ENST00000459276 60 ntBASIC0.44□□□□□ -2.34
VAPBO95292 AC010469.2-201ENST00000496412 480 ntBASIC0.44□□□□□ -2.34
VAPBO95292 AC092436.3-201ENST00000511788 257 ntBASIC0.44□□□□□ -2.34
VAPBO95292 RNU6-1038P-201ENST00000516516 104 ntBASIC0.44□□□□□ -2.34
VAPBO95292 AP001372.4-201ENST00000524889 472 ntBASIC0.44□□□□□ -2.34
VAPBO95292 AL118558.2-201ENST00000556294 238 ntBASIC0.44□□□□□ -2.34
VAPBO95292 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.44□□□□□ -2.34
VAPBO95292 AC040904.1-201ENST00000590850 223 ntBASIC0.44□□□□□ -2.34
VAPBO95292 MIR6734-201ENST00000621166 68 ntBASIC0.44□□□□□ -2.34
VAPBO95292 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
VAPBO95292 RNU6-945P-201ENST00000383947 107 ntBASIC0.43□□□□□ -2.34
VAPBO95292 RNU6-541P-201ENST00000384709 110 ntBASIC0.43□□□□□ -2.34
VAPBO95292 MIR10B-201ENST00000385011 110 ntBASIC0.43□□□□□ -2.34
VAPBO95292 MIR153-2-201ENST00000385225 87 ntBASIC0.43□□□□□ -2.34
VAPBO95292 AL590002.1-201ENST00000406554 418 ntBASIC0.43□□□□□ -2.34
VAPBO95292 AC092423.1-201ENST00000430165 186 ntBASIC0.43□□□□□ -2.34
VAPBO95292 AC233266.1-201ENST00000454518 96 ntBASIC0.43□□□□□ -2.34
VAPBO95292 AC022868.1-201ENST00000517767 391 ntBASIC0.43□□□□□ -2.34
VAPBO95292 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.43□□□□□ -2.34
VAPBO95292 AC016957.1-201ENST00000534895 309 ntBASIC0.43□□□□□ -2.34
VAPBO95292 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.43□□□□□ -2.34
VAPBO95292 AL117336.2-201ENST00000602435 335 ntBASIC0.43□□□□□ -2.34
VAPBO95292 AC242852.1-201ENST00000612151 96 ntBASIC0.43□□□□□ -2.34
VAPBO95292 AL050303.3-201ENST00000613704 284 ntBASIC0.43□□□□□ -2.34
VAPBO95292 AC006504.8-201ENST00000621046 635 ntBASIC0.43□□□□□ -2.34
VAPBO95292 7SK.10-201ENST00000621414 298 ntBASIC0.43□□□□□ -2.34
VAPBO95292 AC244015.1-201ENST00000622301 99 ntBASIC0.43□□□□□ -2.34
VAPBO95292 AC068137.4-201ENST00000638485 296 ntBASIC0.43□□□□□ -2.34
VAPBO95292 AC005592.1-201ENST00000566527 1640 ntBASIC0.42□□□□□ -2.34
VAPBO95292 Y_RNA.122-201ENST00000363331 96 ntBASIC0.42□□□□□ -2.34
VAPBO95292 RNU6-873P-201ENST00000363833 107 ntBASIC0.42□□□□□ -2.34
VAPBO95292 Y_RNA.184-201ENST00000363884 108 ntBASIC0.42□□□□□ -2.34
VAPBO95292 RNU6-280P-201ENST00000364145 104 ntBASIC0.42□□□□□ -2.34
VAPBO95292 Y_RNA.267-201ENST00000364679 109 ntBASIC0.42□□□□□ -2.34
VAPBO95292 SNORD89-201ENST00000390981 114 ntBASIC0.42□□□□□ -2.34
VAPBO95292 RNU6-1158P-201ENST00000391167 107 ntBASIC0.42□□□□□ -2.34
VAPBO95292 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.42□□□□□ -2.34
VAPBO95292 MTCO3P19-201ENST00000415864 321 ntBASIC0.42□□□□□ -2.34
VAPBO95292 MTCO2P16-201ENST00000436962 677 ntBASIC0.42□□□□□ -2.34
VAPBO95292 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.42□□□□□ -2.34
VAPBO95292 AL353572.1-201ENST00000442490 417 ntBASIC0.42□□□□□ -2.34
VAPBO95292 AC093019.1-201ENST00000443135 252 ntBASIC0.42□□□□□ -2.34
VAPBO95292 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.42□□□□□ -2.34
VAPBO95292 AC067940.1-201ENST00000458411 300 ntBASIC0.42□□□□□ -2.34
VAPBO95292 SNORD65B-201ENST00000459126 73 ntBASIC0.42□□□□□ -2.34
VAPBO95292 RNA5SP401-201ENST00000515920 127 ntBASIC0.42□□□□□ -2.34
VAPBO95292 RNU7-172P-201ENST00000517125 64 ntBASIC0.42□□□□□ -2.34
VAPBO95292 AP002004.2-201ENST00000531656 154 ntBASIC0.42□□□□□ -2.34
VAPBO95292 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.42□□□□□ -2.34
VAPBO95292 MIR3192-201ENST00000584920 77 ntBASIC0.42□□□□□ -2.34
VAPBO95292 AC017083.3-201ENST00000609955 700 ntBASIC0.42□□□□□ -2.34
VAPBO95292 AL136317.1-201ENST00000612653 226 ntBASIC0.42□□□□□ -2.34
VAPBO95292 AC091931.1-201ENST00000623488 728 ntBASIC0.42□□□□□ -2.34
VAPBO95292 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.42□□□□□ -2.34
VAPBO95292 SNORD115-32-201ENST00000364079 82 ntBASIC0.41□□□□□ -2.34
VAPBO95292 Y_RNA.796-201ENST00000364268 102 ntBASIC0.41□□□□□ -2.34
VAPBO95292 Y_RNA.799-201ENST00000364992 102 ntBASIC0.41□□□□□ -2.34
VAPBO95292 RNU4-66P-201ENST00000365199 138 ntBASIC0.41□□□□□ -2.34
VAPBO95292 Y_RNA.381-201ENST00000365666 102 ntBASIC0.41□□□□□ -2.34
VAPBO95292 RNU6-793P-201ENST00000384233 104 ntBASIC0.41□□□□□ -2.34
VAPBO95292 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.41□□□□□ -2.34
VAPBO95292 Y_RNA.654-201ENST00000497848 106 ntBASIC0.41□□□□□ -2.34
VAPBO95292 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.41□□□□□ -2.34
VAPBO95292 AC010598.1-201ENST00000510378 103 ntBASIC0.41□□□□□ -2.34
VAPBO95292 AC097462.1-201ENST00000514125 324 ntBASIC0.41□□□□□ -2.34
VAPBO95292 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.41□□□□□ -2.34
VAPBO95292 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.41□□□□□ -2.34
VAPBO95292 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms