Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 ZNF519P2-201ENST00000557032 169 ntBASIC0.84□□□□□ -2.27
CLDN11O75508 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.84□□□□□ -2.27
CLDN11O75508 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.84□□□□□ -2.27
CLDN11O75508 SNORA28-201ENST00000606769 126 ntBASIC0.84□□□□□ -2.27
CLDN11O75508 DISC2.1-201ENST00000612827 205 ntBASIC0.84□□□□□ -2.27
CLDN11O75508 AL359880.1-201ENST00000621879 266 ntBASIC0.84□□□□□ -2.27
CLDN11O75508 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.28
CLDN11O75508 RNU6-727P-201ENST00000363592 107 ntBASIC0.83□□□□□ -2.28
CLDN11O75508 Y_RNA.372-201ENST00000365599 102 ntBASIC0.83□□□□□ -2.28
CLDN11O75508 RNU6-793P-201ENST00000384233 104 ntBASIC0.83□□□□□ -2.28
CLDN11O75508 RNU6-95P-201ENST00000384697 107 ntBASIC0.83□□□□□ -2.28
CLDN11O75508 MIR19B1-201ENST00000384829 87 ntBASIC0.83□□□□□ -2.28
CLDN11O75508 SNORA12.1-201ENST00000390873 148 ntBASIC0.83□□□□□ -2.28
CLDN11O75508 RNU6-159P-201ENST00000391080 106 ntBASIC0.83□□□□□ -2.28
CLDN11O75508 RNU6-1054P-201ENST00000411293 104 ntBASIC0.83□□□□□ -2.28
CLDN11O75508 AC004941.2-201ENST00000427009 228 ntBASIC0.83□□□□□ -2.28
CLDN11O75508 MTND1P11-201ENST00000456661 876 ntBASIC0.83□□□□□ -2.28
CLDN11O75508 RPS29P1-201ENST00000465274 159 ntBASIC0.83□□□□□ -2.28
CLDN11O75508 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.83□□□□□ -2.28
CLDN11O75508 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.83□□□□□ -2.28
CLDN11O75508 PIGPP4-201ENST00000584447 307 ntBASIC0.83□□□□□ -2.28
CLDN11O75508 AC010525.2-201ENST00000590920 195 ntBASIC0.83□□□□□ -2.28
CLDN11O75508 AC010620.1-201ENST00000601088 1102 ntBASIC0.83□□□□□ -2.28
CLDN11O75508 7SK.7-201ENST00000603504 247 ntBASIC0.83□□□□□ -2.28
CLDN11O75508 AC108706.1-201ENST00000611053 297 ntBASIC0.83□□□□□ -2.28
CLDN11O75508 AC018630.2-201ENST00000534866 2403 ntBASIC0.82□□□□□ -2.28
CLDN11O75508 RNU4-79P-201ENST00000362764 141 ntBASIC0.82□□□□□ -2.28
CLDN11O75508 Y_RNA.179-201ENST00000363844 90 ntBASIC0.82□□□□□ -2.28
CLDN11O75508 SNORD116-9-201ENST00000384000 95 ntBASIC0.82□□□□□ -2.28
CLDN11O75508 RNU6-17P-201ENST00000384245 107 ntBASIC0.82□□□□□ -2.28
CLDN11O75508 SNORD116-3-201ENST00000384287 95 ntBASIC0.82□□□□□ -2.28
CLDN11O75508 SNORD116-7-201ENST00000384404 95 ntBASIC0.82□□□□□ -2.28
CLDN11O75508 SNORD116-5-201ENST00000384462 95 ntBASIC0.82□□□□□ -2.28
CLDN11O75508 RNU6-18P-201ENST00000384527 107 ntBASIC0.82□□□□□ -2.28
CLDN11O75508 MIR517A-201ENST00000385001 87 ntBASIC0.82□□□□□ -2.28
CLDN11O75508 RNU6-910P-201ENST00000390844 107 ntBASIC0.82□□□□□ -2.28
CLDN11O75508 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.82□□□□□ -2.28
CLDN11O75508 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.82□□□□□ -2.28
CLDN11O75508 AL445305.1-201ENST00000432577 575 ntBASIC0.82□□□□□ -2.28
CLDN11O75508 MTND4P18-201ENST00000447010 465 ntBASIC0.82□□□□□ -2.28
CLDN11O75508 SNORD65B-201ENST00000459126 73 ntBASIC0.82□□□□□ -2.28
CLDN11O75508 AC091179.3-201ENST00000474761 144 ntBASIC0.82□□□□□ -2.28
CLDN11O75508 AC107401.1-201ENST00000503426 685 ntBASIC0.82□□□□□ -2.28
CLDN11O75508 AC105758.1-201ENST00000506038 399 ntBASIC0.82□□□□□ -2.28
CLDN11O75508 Y_RNA.665-201ENST00000516177 98 ntBASIC0.82□□□□□ -2.28
CLDN11O75508 Y_RNA.688-201ENST00000516565 95 ntBASIC0.82□□□□□ -2.28
CLDN11O75508 AC136932.1-201ENST00000574771 208 ntBASIC0.82□□□□□ -2.28
CLDN11O75508 MIR4661-201ENST00000582720 75 ntBASIC0.82□□□□□ -2.28
CLDN11O75508 MIR4438-201ENST00000585271 93 ntBASIC0.82□□□□□ -2.28
CLDN11O75508 AL162413.1-201ENST00000603198 110 ntBASIC0.82□□□□□ -2.28
CLDN11O75508 Z99129.1-201ENST00000612510 255 ntBASIC0.82□□□□□ -2.28
CLDN11O75508 AL138726.1-201ENST00000614873 333 ntBASIC0.82□□□□□ -2.28
CLDN11O75508 AC009248.2-201ENST00000619826 254 ntBASIC0.82□□□□□ -2.28
CLDN11O75508 AC006435.5-201ENST00000624486 112 ntBASIC0.82□□□□□ -2.28
CLDN11O75508 AC068137.4-201ENST00000638485 296 ntBASIC0.82□□□□□ -2.28
CLDN11O75508 AP000568.1-201ENST00000282964 442 ntBASIC0.81□□□□□ -2.28
CLDN11O75508 RNU6-199P-201ENST00000362954 107 ntBASIC0.81□□□□□ -2.28
CLDN11O75508 RNU6-1252P-201ENST00000363054 104 ntBASIC0.81□□□□□ -2.28
CLDN11O75508 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.81□□□□□ -2.28
CLDN11O75508 RNU2-66P-201ENST00000410650 161 ntBASIC0.81□□□□□ -2.28
CLDN11O75508 Y_RNA.615-201ENST00000410769 117 ntBASIC0.81□□□□□ -2.28
CLDN11O75508 RPL30P16-201ENST00000419341 429 ntBASIC0.81□□□□□ -2.28
CLDN11O75508 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.81□□□□□ -2.28
CLDN11O75508 AC048334.1-201ENST00000477975 159 ntBASIC0.81□□□□□ -2.28
CLDN11O75508 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.81□□□□□ -2.28
CLDN11O75508 RPL30P10-201ENST00000488148 337 ntBASIC0.81□□□□□ -2.28
CLDN11O75508 RNU6-1281P-201ENST00000516223 105 ntBASIC0.81□□□□□ -2.28
CLDN11O75508 MIR4778-201ENST00000577635 80 ntBASIC0.81□□□□□ -2.28
CLDN11O75508 AC019193.3-201ENST00000609144 554 ntBASIC0.81□□□□□ -2.28
CLDN11O75508 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.81□□□□□ -2.28
CLDN11O75508 Y_RNA.184-201ENST00000363884 108 ntBASIC0.8□□□□□ -2.28
CLDN11O75508 Y_RNA.530-201ENST00000384587 101 ntBASIC0.8□□□□□ -2.28
CLDN11O75508 MIR653-201ENST00000385279 96 ntBASIC0.8□□□□□ -2.28
CLDN11O75508 SNORD12-201ENST00000391002 90 ntBASIC0.8□□□□□ -2.28
CLDN11O75508 ZNF885P-201ENST00000420174 1098 ntBASIC0.8□□□□□ -2.28
CLDN11O75508 AL590632.1-201ENST00000424289 371 ntBASIC0.8□□□□□ -2.28
CLDN11O75508 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.8□□□□□ -2.28
CLDN11O75508 STAG3L5P-204ENST00000443759 179 ntBASIC0.8□□□□□ -2.28
CLDN11O75508 MRPS10P1-201ENST00000448483 130 ntBASIC0.8□□□□□ -2.28
CLDN11O75508 RPS27P22-201ENST00000478056 241 ntBASIC0.8□□□□□ -2.28
CLDN11O75508 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.8□□□□□ -2.28
CLDN11O75508 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.8□□□□□ -2.28
CLDN11O75508 AC093303.1-201ENST00000514549 295 ntBASIC0.8□□□□□ -2.28
CLDN11O75508 RN7SKP49-201ENST00000516675 260 ntBASIC0.8□□□□□ -2.28
CLDN11O75508 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.8□□□□□ -2.28
CLDN11O75508 AC090049.2-201ENST00000550377 109 ntBASIC0.8□□□□□ -2.28
CLDN11O75508 CYP3A137P-201ENST00000562436 69 ntBASIC0.8□□□□□ -2.28
CLDN11O75508 UBL5P4-201ENST00000562584 236 ntBASIC0.8□□□□□ -2.28
CLDN11O75508 AC124303.1-201ENST00000605703 360 ntBASIC0.8□□□□□ -2.28
CLDN11O75508 MIR6788-201ENST00000618842 66 ntBASIC0.8□□□□□ -2.28
CLDN11O75508 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
CLDN11O75508 Y_RNA.100-201ENST00000363141 102 ntBASIC0.79□□□□□ -2.28
CLDN11O75508 RNU6-483P-201ENST00000384088 108 ntBASIC0.79□□□□□ -2.28
CLDN11O75508 AF228730.1-201ENST00000397972 663 ntBASIC0.79□□□□□ -2.28
CLDN11O75508 AC063976.4-201ENST00000421971 163 ntBASIC0.79□□□□□ -2.28
CLDN11O75508 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.79□□□□□ -2.28
CLDN11O75508 MTCO3P18-201ENST00000440206 761 ntBASIC0.79□□□□□ -2.28
CLDN11O75508 AC245047.7-201ENST00000440265 293 ntBASIC0.79□□□□□ -2.28
CLDN11O75508 RPL39P28-201ENST00000465655 155 ntBASIC0.79□□□□□ -2.28
CLDN11O75508 AC010469.2-201ENST00000496412 480 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms