Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 RPL23AP75-201ENST00000491601 451 ntBASIC0.82□□□□□ -2.28
BRD4O60885 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.82□□□□□ -2.28
BRD4O60885 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.82□□□□□ -2.28
BRD4O60885 AC004817.2-201ENST00000561794 651 ntBASIC0.82□□□□□ -2.28
BRD4O60885 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.82□□□□□ -2.28
BRD4O60885 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.82□□□□□ -2.28
BRD4O60885 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.82□□□□□ -2.28
BRD4O60885 CTHRC1P1-201ENST00000605383 469 ntBASIC0.82□□□□□ -2.28
BRD4O60885 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.82□□□□□ -2.28
BRD4O60885 AC022079.1-201ENST00000621546 602 ntBASIC0.82□□□□□ -2.28
BRD4O60885 AC097520.1-201ENST00000624435 385 ntBASIC0.82□□□□□ -2.28
BRD4O60885 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
BRD4O60885 SNORA63D-201ENST00000364359 132 ntBASIC0.81□□□□□ -2.28
BRD4O60885 RNU6-784P-201ENST00000384330 106 ntBASIC0.81□□□□□ -2.28
BRD4O60885 SNORD116-1-201ENST00000384335 95 ntBASIC0.81□□□□□ -2.28
BRD4O60885 RNU6-790P-201ENST00000384479 105 ntBASIC0.81□□□□□ -2.28
BRD4O60885 AL117342.1-201ENST00000404861 406 ntBASIC0.81□□□□□ -2.28
BRD4O60885 RNU6-648P-201ENST00000410190 107 ntBASIC0.81□□□□□ -2.28
BRD4O60885 ERLEC1P1-201ENST00000433806 578 ntBASIC0.81□□□□□ -2.28
BRD4O60885 SEPT14P3-201ENST00000439401 183 ntBASIC0.81□□□□□ -2.28
BRD4O60885 AL732372.2-207ENST00000445840 183 ntBASIC0.81□□□□□ -2.28
BRD4O60885 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.81□□□□□ -2.28
BRD4O60885 SEPT14P2-201ENST00000453405 183 ntBASIC0.81□□□□□ -2.28
BRD4O60885 RNU7-57P-201ENST00000459540 60 ntBASIC0.81□□□□□ -2.28
BRD4O60885 AC083904.1-201ENST00000487828 231 ntBASIC0.81□□□□□ -2.28
BRD4O60885 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.81□□□□□ -2.28
BRD4O60885 PSMC1P5-201ENST00000512850 177 ntBASIC0.81□□□□□ -2.28
BRD4O60885 SEPT14P4-201ENST00000513445 186 ntBASIC0.81□□□□□ -2.28
BRD4O60885 RNU6-1198P-201ENST00000516904 67 ntBASIC0.81□□□□□ -2.28
BRD4O60885 RNA5SP54-201ENST00000516951 92 ntBASIC0.81□□□□□ -2.28
BRD4O60885 RNU6-835P-201ENST00000516974 104 ntBASIC0.81□□□□□ -2.28
BRD4O60885 FO082796.1-201ENST00000523795 183 ntBASIC0.81□□□□□ -2.28
BRD4O60885 DEFB131C-201ENST00000528817 165 ntBASIC0.81□□□□□ -2.28
BRD4O60885 AP003484.1-201ENST00000530974 250 ntBASIC0.81□□□□□ -2.28
BRD4O60885 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
BRD4O60885 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.81□□□□□ -2.28
BRD4O60885 RNU6-89P-201ENST00000606519 100 ntBASIC0.81□□□□□ -2.28
BRD4O60885 AC245008.1-201ENST00000608123 476 ntBASIC0.81□□□□□ -2.28
BRD4O60885 AL353149.1-201ENST00000610667 244 ntBASIC0.81□□□□□ -2.28
BRD4O60885 MIR338-201ENST00000636369 67 ntBASIC0.81□□□□□ -2.28
BRD4O60885 Y_RNA.231-201ENST00000364358 102 ntBASIC0.8□□□□□ -2.28
BRD4O60885 SNORA72.2-201ENST00000365028 127 ntBASIC0.8□□□□□ -2.28
BRD4O60885 RNU6-128P-201ENST00000383976 107 ntBASIC0.8□□□□□ -2.28
BRD4O60885 MIR194-1-201ENST00000384892 85 ntBASIC0.8□□□□□ -2.28
BRD4O60885 MIR549A-201ENST00000385268 96 ntBASIC0.8□□□□□ -2.28
BRD4O60885 RNU2-66P-201ENST00000410650 161 ntBASIC0.8□□□□□ -2.28
BRD4O60885 RNU6-1068P-201ENST00000410958 103 ntBASIC0.8□□□□□ -2.28
BRD4O60885 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.8□□□□□ -2.28
BRD4O60885 snoU13.27-201ENST00000459278 104 ntBASIC0.8□□□□□ -2.28
BRD4O60885 Y_RNA.693-201ENST00000516641 110 ntBASIC0.8□□□□□ -2.28
BRD4O60885 MIR3664-201ENST00000579074 99 ntBASIC0.8□□□□□ -2.28
BRD4O60885 AL162413.1-201ENST00000603198 110 ntBASIC0.8□□□□□ -2.28
BRD4O60885 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.8□□□□□ -2.28
BRD4O60885 DISC2.1-201ENST00000612827 205 ntBASIC0.8□□□□□ -2.28
BRD4O60885 AC106800.4-201ENST00000614905 153 ntBASIC0.8□□□□□ -2.28
BRD4O60885 ZNF204P-201ENST00000416749 2397 ntBASIC0.79□□□□□ -2.28
BRD4O60885 RNU6-254P-201ENST00000363377 107 ntBASIC0.79□□□□□ -2.28
BRD4O60885 RNU6-417P-201ENST00000384712 107 ntBASIC0.79□□□□□ -2.28
BRD4O60885 MIR586-201ENST00000385035 97 ntBASIC0.79□□□□□ -2.28
BRD4O60885 RNA5SP323-201ENST00000391094 133 ntBASIC0.79□□□□□ -2.28
BRD4O60885 CALM2P3-201ENST00000400429 449 ntBASIC0.79□□□□□ -2.28
BRD4O60885 AL590002.1-201ENST00000406554 418 ntBASIC0.79□□□□□ -2.28
BRD4O60885 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.79□□□□□ -2.28
BRD4O60885 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.79□□□□□ -2.28
BRD4O60885 PCMTD1P1-201ENST00000455560 355 ntBASIC0.79□□□□□ -2.28
BRD4O60885 RPS26P45-201ENST00000471748 340 ntBASIC0.79□□□□□ -2.28
BRD4O60885 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.79□□□□□ -2.28
BRD4O60885 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.79□□□□□ -2.28
BRD4O60885 MTND2P38-201ENST00000522536 667 ntBASIC0.79□□□□□ -2.28
BRD4O60885 NBR2-204ENST00000587322 63 ntBASIC0.79□□□□□ -2.28
BRD4O60885 AC146944.4-201ENST00000602697 718 ntBASIC0.79□□□□□ -2.28
BRD4O60885 AL365434.2-201ENST00000607979 234 ntBASIC0.79□□□□□ -2.28
BRD4O60885 AC006504.8-201ENST00000621046 635 ntBASIC0.79□□□□□ -2.28
BRD4O60885 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.79□□□□□ -2.28
BRD4O60885 AL359880.1-201ENST00000621879 266 ntBASIC0.79□□□□□ -2.28
BRD4O60885 AL078596.1-201ENST00000624856 447 ntBASIC0.79□□□□□ -2.28
BRD4O60885 Y_RNA.51-201ENST00000362725 102 ntBASIC0.78□□□□□ -2.28
BRD4O60885 snoU2-30.2-201ENST00000362805 70 ntBASIC0.78□□□□□ -2.28
BRD4O60885 SNORD113-7-201ENST00000363762 77 ntBASIC0.78□□□□□ -2.28
BRD4O60885 Y_RNA.280-201ENST00000364765 112 ntBASIC0.78□□□□□ -2.28
BRD4O60885 RNU6-331P-201ENST00000384724 107 ntBASIC0.78□□□□□ -2.28
BRD4O60885 MIR514A2-201ENST00000385131 88 ntBASIC0.78□□□□□ -2.28
BRD4O60885 MIR514A3-201ENST00000385132 88 ntBASIC0.78□□□□□ -2.28
BRD4O60885 RNU6-57P-201ENST00000411348 103 ntBASIC0.78□□□□□ -2.28
BRD4O60885 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.78□□□□□ -2.28
BRD4O60885 USP9YP14-201ENST00000430663 563 ntBASIC0.78□□□□□ -2.28
BRD4O60885 HMGN2P34-201ENST00000437647 269 ntBASIC0.78□□□□□ -2.28
BRD4O60885 AF186996.7-201ENST00000492781 209 ntBASIC0.78□□□□□ -2.28
BRD4O60885 RNU6-322P-201ENST00000516010 103 ntBASIC0.78□□□□□ -2.28
BRD4O60885 RNU6-1281P-201ENST00000516223 105 ntBASIC0.78□□□□□ -2.28
BRD4O60885 RNU6-344P-201ENST00000516635 111 ntBASIC0.78□□□□□ -2.28
BRD4O60885 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.78□□□□□ -2.28
BRD4O60885 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.78□□□□□ -2.28
BRD4O60885 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.78□□□□□ -2.28
BRD4O60885 MIR4709-201ENST00000577272 72 ntBASIC0.78□□□□□ -2.28
BRD4O60885 AL133215.3-201ENST00000609801 448 ntBASIC0.78□□□□□ -2.28
BRD4O60885 AC006001.4-201ENST00000622243 395 ntBASIC0.78□□□□□ -2.28
BRD4O60885 SCARNA4-201ENST00000629045 128 ntBASIC0.78□□□□□ -2.28
BRD4O60885 AC068137.3-201ENST00000639191 341 ntBASIC0.78□□□□□ -2.28
BRD4O60885 Y_RNA.151-201ENST00000363566 112 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms