Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 AC010297.1-201ENST00000623948 149 ntBASIC2.59□□□□□ -1.99
TBC1D4O60343 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
TBC1D4O60343 LINC02555-201ENST00000563933 1951 ntBASIC2.58□□□□□ -2
TBC1D4O60343 Y_RNA.149-201ENST00000363558 117 ntBASIC2.58□□□□□ -2
TBC1D4O60343 U3.8-201ENST00000363675 217 ntBASIC2.58□□□□□ -2
TBC1D4O60343 RNU6-702P-201ENST00000364982 107 ntBASIC2.58□□□□□ -2
TBC1D4O60343 SNORD63-201ENST00000384262 68 ntBASIC2.58□□□□□ -2
TBC1D4O60343 Y_RNA.462-201ENST00000384268 102 ntBASIC2.58□□□□□ -2
TBC1D4O60343 SNORD115-46-201ENST00000390982 71 ntBASIC2.58□□□□□ -2
TBC1D4O60343 AL603908.1-201ENST00000406098 201 ntBASIC2.58□□□□□ -2
TBC1D4O60343 SUMO1P4-201ENST00000429430 302 ntBASIC2.58□□□□□ -2
TBC1D4O60343 NDUFB4P10-201ENST00000452541 359 ntBASIC2.58□□□□□ -2
TBC1D4O60343 AC098869.1-201ENST00000481627 292 ntBASIC2.58□□□□□ -2
TBC1D4O60343 MTND1P19-201ENST00000511780 315 ntBASIC2.58□□□□□ -2
TBC1D4O60343 SNORA4.4-201ENST00000515921 135 ntBASIC2.58□□□□□ -2
TBC1D4O60343 RNU6-1143P-201ENST00000516125 104 ntBASIC2.58□□□□□ -2
TBC1D4O60343 RNA5SP458-201ENST00000516188 119 ntBASIC2.58□□□□□ -2
TBC1D4O60343 Y_RNA.668-201ENST00000516233 93 ntBASIC2.58□□□□□ -2
TBC1D4O60343 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.58□□□□□ -2
TBC1D4O60343 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.58□□□□□ -2
TBC1D4O60343 MIR4300-201ENST00000581016 96 ntBASIC2.58□□□□□ -2
TBC1D4O60343 MIR4753-201ENST00000585119 83 ntBASIC2.58□□□□□ -2
TBC1D4O60343 AC046143.2-201ENST00000609789 160 ntBASIC2.58□□□□□ -2
TBC1D4O60343 AL353997.5-201ENST00000618886 171 ntBASIC2.58□□□□□ -2
TBC1D4O60343 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
TBC1D4O60343 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
TBC1D4O60343 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TBC1D4O60343 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.57□□□□□ -2
TBC1D4O60343 MIR410-201ENST00000362222 80 ntBASIC2.57□□□□□ -2
TBC1D4O60343 SNORD114-1-201ENST00000362705 72 ntBASIC2.57□□□□□ -2
TBC1D4O60343 Y_RNA.332-201ENST00000365271 113 ntBASIC2.57□□□□□ -2
TBC1D4O60343 RNU6-1264P-201ENST00000383891 107 ntBASIC2.57□□□□□ -2
TBC1D4O60343 RNU6-975P-201ENST00000384296 105 ntBASIC2.57□□□□□ -2
TBC1D4O60343 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.57□□□□□ -2
TBC1D4O60343 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.57□□□□□ -2
TBC1D4O60343 AL137159.1-201ENST00000452808 512 ntBASIC2.57□□□□□ -2
TBC1D4O60343 PRELID3BP1-201ENST00000457142 540 ntBASIC2.57□□□□□ -2
TBC1D4O60343 AC025465.3-201ENST00000510570 311 ntBASIC2.57□□□□□ -2
TBC1D4O60343 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.57□□□□□ -2
TBC1D4O60343 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.57□□□□□ -2
TBC1D4O60343 CYCSP26-201ENST00000534107 320 ntBASIC2.57□□□□□ -2
TBC1D4O60343 AL161670.1-201ENST00000554348 137 ntBASIC2.57□□□□□ -2
TBC1D4O60343 MIR4423-201ENST00000580922 80 ntBASIC2.57□□□□□ -2
TBC1D4O60343 AC005357.1-201ENST00000588399 301 ntBASIC2.57□□□□□ -2
TBC1D4O60343 AC005176.2-201ENST00000596933 147 ntBASIC2.57□□□□□ -2
TBC1D4O60343 AC004467.1-201ENST00000615678 330 ntBASIC2.57□□□□□ -2
TBC1D4O60343 MIR376A1-201ENST00000616574 68 ntBASIC2.57□□□□□ -2
TBC1D4O60343 AC078938.1-201ENST00000620993 318 ntBASIC2.57□□□□□ -2
TBC1D4O60343 MIR1291-201ENST00000627649 87 ntBASIC2.57□□□□□ -2
TBC1D4O60343 MIR3674-201ENST00000636576 68 ntBASIC2.57□□□□□ -2
TBC1D4O60343 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
TBC1D4O60343 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.56□□□□□ -2
TBC1D4O60343 RNA5SP393-201ENST00000363423 117 ntBASIC2.56□□□□□ -2
TBC1D4O60343 RNA5SP99-201ENST00000364020 114 ntBASIC2.56□□□□□ -2
TBC1D4O60343 Y_RNA.230-201ENST00000364348 109 ntBASIC2.56□□□□□ -2
TBC1D4O60343 Y_RNA.396-201ENST00000383949 103 ntBASIC2.56□□□□□ -2
TBC1D4O60343 RNU6-418P-201ENST00000384035 107 ntBASIC2.56□□□□□ -2
TBC1D4O60343 RNU6-1310P-201ENST00000384153 107 ntBASIC2.56□□□□□ -2
TBC1D4O60343 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.56□□□□□ -2
TBC1D4O60343 RNA5SP475-201ENST00000410568 110 ntBASIC2.56□□□□□ -2
TBC1D4O60343 AC123900.1-201ENST00000420390 96 ntBASIC2.56□□□□□ -2
TBC1D4O60343 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.56□□□□□ -2
TBC1D4O60343 AC016717.1-201ENST00000448918 286 ntBASIC2.56□□□□□ -2
TBC1D4O60343 RNU7-57P-201ENST00000459540 60 ntBASIC2.56□□□□□ -2
TBC1D4O60343 HMGB3P17-201ENST00000504195 649 ntBASIC2.56□□□□□ -2
TBC1D4O60343 AP003733.2-201ENST00000529409 171 ntBASIC2.56□□□□□ -2
TBC1D4O60343 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.56□□□□□ -2
TBC1D4O60343 MYL12BP1-201ENST00000569826 507 ntBASIC2.56□□□□□ -2
TBC1D4O60343 MIR5194-201ENST00000582634 120 ntBASIC2.56□□□□□ -2
TBC1D4O60343 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.56□□□□□ -2
TBC1D4O60343 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.55□□□□□ -2
TBC1D4O60343 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.55□□□□□ -2
TBC1D4O60343 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TBC1D4O60343 Y_RNA.101-201ENST00000363154 102 ntBASIC2.55□□□□□ -2
TBC1D4O60343 RNU6-454P-201ENST00000364292 107 ntBASIC2.55□□□□□ -2
TBC1D4O60343 Y_RNA.476-201ENST00000384347 108 ntBASIC2.55□□□□□ -2
TBC1D4O60343 RNU1-148P-201ENST00000384472 162 ntBASIC2.55□□□□□ -2
TBC1D4O60343 Y_RNA.570-201ENST00000384750 101 ntBASIC2.55□□□□□ -2
TBC1D4O60343 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TBC1D4O60343 RNU5A-5P-201ENST00000411054 116 ntBASIC2.55□□□□□ -2
TBC1D4O60343 RPL21P38-201ENST00000418090 167 ntBASIC2.55□□□□□ -2
TBC1D4O60343 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.55□□□□□ -2
TBC1D4O60343 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.55□□□□□ -2
TBC1D4O60343 AC026436.1-201ENST00000510537 270 ntBASIC2.55□□□□□ -2
TBC1D4O60343 RNU1-104P-201ENST00000517280 175 ntBASIC2.55□□□□□ -2
TBC1D4O60343 AC021269.2-201ENST00000532318 330 ntBASIC2.55□□□□□ -2
TBC1D4O60343 AC091932.3-201ENST00000624223 323 ntBASIC2.55□□□□□ -2
TBC1D4O60343 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.55□□□□□ -2
TBC1D4O60343 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
TBC1D4O60343 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TBC1D4O60343 MIR6073-201ENST00000352083 89 ntBASIC2.54□□□□□ -2
TBC1D4O60343 MIR340-201ENST00000362125 95 ntBASIC2.54□□□□□ -2
TBC1D4O60343 RNU6-1175P-201ENST00000365200 107 ntBASIC2.54□□□□□ -2
TBC1D4O60343 RNU6-472P-201ENST00000384299 107 ntBASIC2.54□□□□□ -2
TBC1D4O60343 MIR215-201ENST00000384858 110 ntBASIC2.54□□□□□ -2
TBC1D4O60343 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.54□□□□□ -2
TBC1D4O60343 MIR1262-201ENST00000408276 93 ntBASIC2.54□□□□□ -2
TBC1D4O60343 MIR1185-2-201ENST00000408687 86 ntBASIC2.54□□□□□ -2
TBC1D4O60343 MTCO1P44-201ENST00000441935 243 ntBASIC2.54□□□□□ -2
TBC1D4O60343 AC010531.2-201ENST00000465012 153 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms