Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 RNU7-28P-201ENST00000516759 62 ntBASIC-0.73□□□□□ -2.53
SSSCA1O60232 AC100830.2-201ENST00000581636 240 ntBASIC-0.73□□□□□ -2.53
SSSCA1O60232 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.73□□□□□ -2.53
SSSCA1O60232 AC073539.2-201ENST00000597113 165 ntBASIC-0.73□□□□□ -2.53
SSSCA1O60232 RNU1-29P-201ENST00000606574 126 ntBASIC-0.73□□□□□ -2.53
SSSCA1O60232 AC108747.1-201ENST00000609508 535 ntBASIC-0.73□□□□□ -2.53
SSSCA1O60232 AL590491.3-201ENST00000610731 82 ntBASIC-0.73□□□□□ -2.53
SSSCA1O60232 TCL6_2.1-201ENST00000615162 119 ntBASIC-0.73□□□□□ -2.53
SSSCA1O60232 AC104260.1-201ENST00000616660 539 ntBASIC-0.73□□□□□ -2.53
SSSCA1O60232 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-0.73□□□□□ -2.53
SSSCA1O60232 MTND4P12-201ENST00000498999 1377 ntBASIC-0.73□□□□□ -2.53
SSSCA1O60232 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.73□□□□□ -2.53
SSSCA1O60232 MIR655-201ENST00000362159 97 ntBASIC-0.74□□□□□ -2.53
SSSCA1O60232 RNU6-934P-201ENST00000365154 107 ntBASIC-0.74□□□□□ -2.53
SSSCA1O60232 MIR196A1-201ENST00000388006 70 ntBASIC-0.74□□□□□ -2.53
SSSCA1O60232 MIR891A-201ENST00000401237 79 ntBASIC-0.74□□□□□ -2.53
SSSCA1O60232 USP9YP11-201ENST00000427537 717 ntBASIC-0.74□□□□□ -2.53
SSSCA1O60232 AL117351.1-201ENST00000438864 766 ntBASIC-0.74□□□□□ -2.53
SSSCA1O60232 AC009237.7-201ENST00000447357 229 ntBASIC-0.74□□□□□ -2.53
SSSCA1O60232 RNU6-221P-201ENST00000459541 99 ntBASIC-0.74□□□□□ -2.53
SSSCA1O60232 RNU6-138P-201ENST00000515952 107 ntBASIC-0.74□□□□□ -2.53
SSSCA1O60232 RNU2-56P-201ENST00000516826 190 ntBASIC-0.74□□□□□ -2.53
SSSCA1O60232 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-0.74□□□□□ -2.53
SSSCA1O60232 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-0.74□□□□□ -2.53
SSSCA1O60232 MRPS36P4-201ENST00000534436 298 ntBASIC-0.74□□□□□ -2.53
SSSCA1O60232 AC087894.1-201ENST00000538359 518 ntBASIC-0.74□□□□□ -2.53
SSSCA1O60232 AC090897.1-201ENST00000580909 226 ntBASIC-0.74□□□□□ -2.53
SSSCA1O60232 AC006380.1-201ENST00000603598 186 ntBASIC-0.74□□□□□ -2.53
SSSCA1O60232 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-0.74□□□□□ -2.53
SSSCA1O60232 AC010999.1-201ENST00000611856 324 ntBASIC-0.74□□□□□ -2.53
SSSCA1O60232 SNORA43.4-201ENST00000629559 138 ntBASIC-0.74□□□□□ -2.53
SSSCA1O60232 ZNF204P-201ENST00000416749 2397 ntBASIC-0.74□□□□□ -2.53
SSSCA1O60232 AL445523.1-201ENST00000451184 1362 ntBASIC-0.74□□□□□ -2.53
SSSCA1O60232 SNORD45.3-201ENST00000363836 72 ntBASIC-0.75□□□□□ -2.53
SSSCA1O60232 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.75□□□□□ -2.53
SSSCA1O60232 RNY1P7-201ENST00000384743 110 ntBASIC-0.75□□□□□ -2.53
SSSCA1O60232 MIR563-201ENST00000385080 79 ntBASIC-0.75□□□□□ -2.53
SSSCA1O60232 MIR1185-2-201ENST00000408687 86 ntBASIC-0.75□□□□□ -2.53
SSSCA1O60232 RNU6-607P-201ENST00000411283 108 ntBASIC-0.75□□□□□ -2.53
SSSCA1O60232 AC004866.1-201ENST00000411748 78 ntBASIC-0.75□□□□□ -2.53
SSSCA1O60232 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-0.75□□□□□ -2.53
SSSCA1O60232 MTND1P32-201ENST00000433043 938 ntBASIC-0.75□□□□□ -2.53
SSSCA1O60232 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.75□□□□□ -2.53
SSSCA1O60232 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-0.75□□□□□ -2.53
SSSCA1O60232 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.75□□□□□ -2.53
SSSCA1O60232 SNORA18.7-201ENST00000516910 131 ntBASIC-0.75□□□□□ -2.53
SSSCA1O60232 AC023442.1-201ENST00000531247 422 ntBASIC-0.75□□□□□ -2.53
SSSCA1O60232 AC026470.2-201ENST00000561492 181 ntBASIC-0.75□□□□□ -2.53
SSSCA1O60232 AL139286.2-201ENST00000606838 396 ntBASIC-0.75□□□□□ -2.53
SSSCA1O60232 AC144521.1-201ENST00000607148 956 ntBASIC-0.75□□□□□ -2.53
SSSCA1O60232 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.75□□□□□ -2.53
SSSCA1O60232 AC097460.3-201ENST00000623099 442 ntBASIC-0.75□□□□□ -2.53
SSSCA1O60232 Y_RNA.192-201ENST00000363977 102 ntBASIC-0.76□□□□□ -2.53
SSSCA1O60232 RNU6-468P-201ENST00000384003 109 ntBASIC-0.76□□□□□ -2.53
SSSCA1O60232 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.76□□□□□ -2.53
SSSCA1O60232 AC098592.1-201ENST00000419352 333 ntBASIC-0.76□□□□□ -2.53
SSSCA1O60232 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.76□□□□□ -2.53
SSSCA1O60232 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.76□□□□□ -2.53
SSSCA1O60232 snoU13.6-201ENST00000458785 104 ntBASIC-0.76□□□□□ -2.53
SSSCA1O60232 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-0.76□□□□□ -2.53
SSSCA1O60232 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.76□□□□□ -2.53
SSSCA1O60232 AC010424.1-201ENST00000506336 297 ntBASIC-0.76□□□□□ -2.53
SSSCA1O60232 RNU6-504P-201ENST00000516568 104 ntBASIC-0.76□□□□□ -2.53
SSSCA1O60232 SNORA74.3-201ENST00000517108 154 ntBASIC-0.76□□□□□ -2.53
SSSCA1O60232 AC104383.1-201ENST00000530297 370 ntBASIC-0.76□□□□□ -2.53
SSSCA1O60232 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC-0.76□□□□□ -2.53
SSSCA1O60232 AC103996.1-201ENST00000555468 102 ntBASIC-0.76□□□□□ -2.53
SSSCA1O60232 AL121992.2-201ENST00000606262 256 ntBASIC-0.76□□□□□ -2.53
SSSCA1O60232 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.76□□□□□ -2.53
SSSCA1O60232 Six3os1_7.1-201ENST00000621512 201 ntBASIC-0.76□□□□□ -2.53
SSSCA1O60232 AC106754.1-201ENST00000562632 1513 ntBASIC-0.76□□□□□ -2.53
SSSCA1O60232 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.77□□□□□ -2.53
SSSCA1O60232 RNU6-236P-201ENST00000363886 106 ntBASIC-0.77□□□□□ -2.53
SSSCA1O60232 SNORD14.1-201ENST00000365609 90 ntBASIC-0.77□□□□□ -2.53
SSSCA1O60232 SNORA3B-201ENST00000391305 131 ntBASIC-0.77□□□□□ -2.53
SSSCA1O60232 MIR1265-201ENST00000408444 86 ntBASIC-0.77□□□□□ -2.53
SSSCA1O60232 AL355994.1-201ENST00000424379 260 ntBASIC-0.77□□□□□ -2.53
SSSCA1O60232 ZNF736P7Y-201ENST00000425158 820 ntBASIC-0.77□□□□□ -2.53
SSSCA1O60232 MTND1P17-201ENST00000448961 204 ntBASIC-0.77□□□□□ -2.53
SSSCA1O60232 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC-0.77□□□□□ -2.53
SSSCA1O60232 RPS29P27-201ENST00000463711 170 ntBASIC-0.77□□□□□ -2.53
SSSCA1O60232 AC007215.1-201ENST00000464893 276 ntBASIC-0.77□□□□□ -2.53
SSSCA1O60232 AC093303.1-201ENST00000514549 295 ntBASIC-0.77□□□□□ -2.53
SSSCA1O60232 AC090617.3-201ENST00000573670 475 ntBASIC-0.77□□□□□ -2.53
SSSCA1O60232 AC012467.1-201ENST00000607740 256 ntBASIC-0.77□□□□□ -2.53
SSSCA1O60232 AC072039.2-201ENST00000608883 439 ntBASIC-0.77□□□□□ -2.53
SSSCA1O60232 AL078596.1-201ENST00000624856 447 ntBASIC-0.77□□□□□ -2.53
SSSCA1O60232 AL162726.3-218ENST00000636401 95 ntBASIC-0.77□□□□□ -2.53
SSSCA1O60232 SNORD114-14-201ENST00000362723 75 ntBASIC-0.78□□□□□ -2.53
SSSCA1O60232 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.78□□□□□ -2.53
SSSCA1O60232 RNU6-769P-201ENST00000384407 104 ntBASIC-0.78□□□□□ -2.53
SSSCA1O60232 MIR501-201ENST00000390204 84 ntBASIC-0.78□□□□□ -2.53
SSSCA1O60232 RPS29P13-201ENST00000402041 169 ntBASIC-0.78□□□□□ -2.53
SSSCA1O60232 AC114491.1-201ENST00000416095 246 ntBASIC-0.78□□□□□ -2.53
SSSCA1O60232 AC079781.2-201ENST00000446424 169 ntBASIC-0.78□□□□□ -2.53
SSSCA1O60232 MTCO3P8-201ENST00000453691 755 ntBASIC-0.78□□□□□ -2.53
SSSCA1O60232 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.78□□□□□ -2.53
SSSCA1O60232 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.78□□□□□ -2.53
SSSCA1O60232 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.78□□□□□ -2.53
SSSCA1O60232 SCARNA17-201ENST00000516183 144 ntBASIC-0.78□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms