Protein–RNA interactions for Protein: O43542

XRCC3, DNA repair protein XRCC3, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3O43542 Z98742.3-201ENST00000418637 326 ntBASIC1.77□□□□□ -2.13
XRCC3O43542 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.77□□□□□ -2.13
XRCC3O43542 RAB28P5-201ENST00000427490 651 ntBASIC1.77□□□□□ -2.13
XRCC3O43542 FCF1P4-201ENST00000448326 183 ntBASIC1.77□□□□□ -2.13
XRCC3O43542 Y_RNA.638-201ENST00000459374 113 ntBASIC1.77□□□□□ -2.13
XRCC3O43542 RNA5SP57-201ENST00000459463 123 ntBASIC1.77□□□□□ -2.13
XRCC3O43542 RPL26P26-201ENST00000480251 434 ntBASIC1.77□□□□□ -2.13
XRCC3O43542 RN7SL274P-201ENST00000492268 272 ntBASIC1.77□□□□□ -2.13
XRCC3O43542 HMGN1P13-201ENST00000505795 138 ntBASIC1.77□□□□□ -2.13
XRCC3O43542 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.77□□□□□ -2.13
XRCC3O43542 SNRPGP18-201ENST00000553000 214 ntBASIC1.77□□□□□ -2.13
XRCC3O43542 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.77□□□□□ -2.13
XRCC3O43542 AC006600.1-201ENST00000572529 153 ntBASIC1.77□□□□□ -2.13
XRCC3O43542 AL138825.1-201ENST00000618587 192 ntBASIC1.77□□□□□ -2.13
XRCC3O43542 AL606534.2-204ENST00000635008 178 ntBASIC1.77□□□□□ -2.13
XRCC3O43542 AC245060.5-201ENST00000610778 3293 ntBASIC1.77□□□□□ -2.13
XRCC3O43542 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
XRCC3O43542 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.76□□□□□ -2.13
XRCC3O43542 Y_RNA.39-201ENST00000362620 98 ntBASIC1.76□□□□□ -2.13
XRCC3O43542 RNU6-1266P-201ENST00000362794 105 ntBASIC1.76□□□□□ -2.13
XRCC3O43542 RNU6-296P-201ENST00000384608 107 ntBASIC1.76□□□□□ -2.13
XRCC3O43542 SNORD78.2-201ENST00000391076 69 ntBASIC1.76□□□□□ -2.13
XRCC3O43542 RPS20P15-201ENST00000412792 311 ntBASIC1.76□□□□□ -2.13
XRCC3O43542 AC245047.4-201ENST00000433189 144 ntBASIC1.76□□□□□ -2.13
XRCC3O43542 SNORD65B-201ENST00000459126 73 ntBASIC1.76□□□□□ -2.13
XRCC3O43542 AC010409.1-201ENST00000487382 476 ntBASIC1.76□□□□□ -2.13
XRCC3O43542 MRPS17P9-201ENST00000511924 393 ntBASIC1.76□□□□□ -2.13
XRCC3O43542 RNA5SP281-201ENST00000516504 135 ntBASIC1.76□□□□□ -2.13
XRCC3O43542 SNORA40.14-201ENST00000516543 86 ntBASIC1.76□□□□□ -2.13
XRCC3O43542 AP002001.1-203ENST00000534002 267 ntBASIC1.76□□□□□ -2.13
XRCC3O43542 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.76□□□□□ -2.13
XRCC3O43542 MIR3684-201ENST00000579779 74 ntBASIC1.76□□□□□ -2.13
XRCC3O43542 MIR4713-201ENST00000582691 75 ntBASIC1.76□□□□□ -2.13
XRCC3O43542 MIR4769-201ENST00000584126 77 ntBASIC1.76□□□□□ -2.13
XRCC3O43542 AC022432.1-201ENST00000595739 310 ntBASIC1.76□□□□□ -2.13
XRCC3O43542 AC008749.1-201ENST00000597650 306 ntBASIC1.76□□□□□ -2.13
XRCC3O43542 AL096840.1-201ENST00000603287 93 ntBASIC1.76□□□□□ -2.13
XRCC3O43542 AC090971.5-201ENST00000621102 293 ntBASIC1.76□□□□□ -2.13
XRCC3O43542 AC006435.5-201ENST00000624486 112 ntBASIC1.76□□□□□ -2.13
XRCC3O43542 MIR3674-201ENST00000636576 68 ntBASIC1.76□□□□□ -2.13
XRCC3O43542 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
XRCC3O43542 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
XRCC3O43542 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
XRCC3O43542 MIR369-201ENST00000362155 70 ntBASIC1.75□□□□□ -2.13
XRCC3O43542 RNU6-1310P-201ENST00000384153 107 ntBASIC1.75□□□□□ -2.13
XRCC3O43542 RNU6-708P-201ENST00000384217 107 ntBASIC1.75□□□□□ -2.13
XRCC3O43542 RNY1P14-201ENST00000384426 108 ntBASIC1.75□□□□□ -2.13
XRCC3O43542 RNA5SP425-201ENST00000410336 112 ntBASIC1.75□□□□□ -2.13
XRCC3O43542 RNA5SP475-201ENST00000410568 110 ntBASIC1.75□□□□□ -2.13
XRCC3O43542 AL135786.1-201ENST00000415892 214 ntBASIC1.75□□□□□ -2.13
XRCC3O43542 AC009963.1-201ENST00000417265 157 ntBASIC1.75□□□□□ -2.13
XRCC3O43542 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.75□□□□□ -2.13
XRCC3O43542 RPS29P21-201ENST00000496272 170 ntBASIC1.75□□□□□ -2.13
XRCC3O43542 RNU6-408P-201ENST00000515910 100 ntBASIC1.75□□□□□ -2.13
XRCC3O43542 RNU1-41P-201ENST00000516161 162 ntBASIC1.75□□□□□ -2.13
XRCC3O43542 RNU1-48P-201ENST00000516400 162 ntBASIC1.75□□□□□ -2.13
XRCC3O43542 MIR514B-201ENST00000516774 80 ntBASIC1.75□□□□□ -2.13
XRCC3O43542 AC024995.1-201ENST00000523014 93 ntBASIC1.75□□□□□ -2.13
XRCC3O43542 AC084364.2-201ENST00000546924 395 ntBASIC1.75□□□□□ -2.13
XRCC3O43542 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.75□□□□□ -2.13
XRCC3O43542 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.75□□□□□ -2.13
XRCC3O43542 MIR5188-201ENST00000583467 113 ntBASIC1.75□□□□□ -2.13
XRCC3O43542 SNORD58B-201ENST00000607313 66 ntBASIC1.75□□□□□ -2.13
XRCC3O43542 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.75□□□□□ -2.13
XRCC3O43542 AC010615.1-201ENST00000594254 1764 ntBASIC1.75□□□□□ -2.13
XRCC3O43542 CENPCP1-201ENST00000533085 2578 ntBASIC1.74□□□□□ -2.13
XRCC3O43542 AL359851.1-201ENST00000569460 4997 ntBASIC1.74□□□□□ -2.13
XRCC3O43542 SNORA63D-201ENST00000364359 132 ntBASIC1.74□□□□□ -2.13
XRCC3O43542 SNORA72.2-201ENST00000365028 127 ntBASIC1.74□□□□□ -2.13
XRCC3O43542 RNA5SP467-201ENST00000391274 118 ntBASIC1.74□□□□□ -2.13
XRCC3O43542 MRPL35P1-201ENST00000404272 572 ntBASIC1.74□□□□□ -2.13
XRCC3O43542 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.74□□□□□ -2.13
XRCC3O43542 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.74□□□□□ -2.13
XRCC3O43542 AC010469.2-201ENST00000496412 480 ntBASIC1.74□□□□□ -2.13
XRCC3O43542 AC010598.1-201ENST00000510378 103 ntBASIC1.74□□□□□ -2.13
XRCC3O43542 RNU6-237P-201ENST00000515985 71 ntBASIC1.74□□□□□ -2.13
XRCC3O43542 RNU6-475P-201ENST00000516073 104 ntBASIC1.74□□□□□ -2.13
XRCC3O43542 AC023442.1-201ENST00000531247 422 ntBASIC1.74□□□□□ -2.13
XRCC3O43542 AC006157.1-201ENST00000611750 366 ntBASIC1.74□□□□□ -2.13
XRCC3O43542 MIR6873-201ENST00000622788 63 ntBASIC1.74□□□□□ -2.13
XRCC3O43542 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.74□□□□□ -2.13
XRCC3O43542 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
XRCC3O43542 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
XRCC3O43542 ZNF72P-201ENST00000425869 1908 ntBASIC1.74□□□□□ -2.13
XRCC3O43542 MTND4P29-201ENST00000503122 1372 ntBASIC1.73□□□□□ -2.13
XRCC3O43542 SNORA33-201ENST00000363664 130 ntBASIC1.73□□□□□ -2.13
XRCC3O43542 RNU6-961P-201ENST00000363893 105 ntBASIC1.73□□□□□ -2.13
XRCC3O43542 RNU6-454P-201ENST00000364292 107 ntBASIC1.73□□□□□ -2.13
XRCC3O43542 Y_RNA.813-201ENST00000364639 102 ntBASIC1.73□□□□□ -2.13
XRCC3O43542 RNU6-926P-201ENST00000384075 107 ntBASIC1.73□□□□□ -2.13
XRCC3O43542 MIR520A-201ENST00000384862 85 ntBASIC1.73□□□□□ -2.13
XRCC3O43542 RNA5SP489-201ENST00000410986 109 ntBASIC1.73□□□□□ -2.13
XRCC3O43542 SDAD1P3-201ENST00000427380 333 ntBASIC1.73□□□□□ -2.13
XRCC3O43542 AL160004.2-201ENST00000432935 350 ntBASIC1.73□□□□□ -2.13
XRCC3O43542 AC069257.2-201ENST00000441819 155 ntBASIC1.73□□□□□ -2.13
XRCC3O43542 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.73□□□□□ -2.13
XRCC3O43542 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.73□□□□□ -2.13
XRCC3O43542 SNORA31.17-201ENST00000516953 127 ntBASIC1.73□□□□□ -2.13
XRCC3O43542 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.73□□□□□ -2.13
XRCC3O43542 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms