Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 RNU6-727P-201ENST00000363592 107 ntBASIC0.83□□□□□ -2.28
CLOCKO15516 RNU6-280P-201ENST00000364145 104 ntBASIC0.83□□□□□ -2.28
CLOCKO15516 RNU1-36P-201ENST00000365130 165 ntBASIC0.83□□□□□ -2.28
CLOCKO15516 Y_RNA.415-201ENST00000384012 112 ntBASIC0.83□□□□□ -2.28
CLOCKO15516 RNU6-1042P-201ENST00000384204 107 ntBASIC0.83□□□□□ -2.28
CLOCKO15516 RNU6-541P-201ENST00000384709 110 ntBASIC0.83□□□□□ -2.28
CLOCKO15516 AC063976.4-201ENST00000421971 163 ntBASIC0.83□□□□□ -2.28
CLOCKO15516 AC245047.7-201ENST00000440265 293 ntBASIC0.83□□□□□ -2.28
CLOCKO15516 DAP3P1-201ENST00000441522 278 ntBASIC0.83□□□□□ -2.28
CLOCKO15516 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.83□□□□□ -2.28
CLOCKO15516 SCARNA16.2-201ENST00000516520 172 ntBASIC0.83□□□□□ -2.28
CLOCKO15516 APOOP3-201ENST00000536787 586 ntBASIC0.83□□□□□ -2.28
CLOCKO15516 MIR4778-201ENST00000577635 80 ntBASIC0.83□□□□□ -2.28
CLOCKO15516 AC013244.2-201ENST00000603396 103 ntBASIC0.83□□□□□ -2.28
CLOCKO15516 AC068137.3-201ENST00000639191 341 ntBASIC0.83□□□□□ -2.28
CLOCKO15516 AC099654.12-201ENST00000639868 649 ntBASIC0.83□□□□□ -2.28
CLOCKO15516 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.83□□□□□ -2.28
CLOCKO15516 MTND5P26-201ENST00000426018 1752 ntBASIC0.83□□□□□ -2.28
CLOCKO15516 AP000568.1-201ENST00000282964 442 ntBASIC0.82□□□□□ -2.28
CLOCKO15516 RNU5F-3P-201ENST00000363767 117 ntBASIC0.82□□□□□ -2.28
CLOCKO15516 RNU6-793P-201ENST00000384233 104 ntBASIC0.82□□□□□ -2.28
CLOCKO15516 RNU6-1119P-201ENST00000384349 108 ntBASIC0.82□□□□□ -2.28
CLOCKO15516 RNU6-159P-201ENST00000391080 106 ntBASIC0.82□□□□□ -2.28
CLOCKO15516 RNU6-1068P-201ENST00000410958 103 ntBASIC0.82□□□□□ -2.28
CLOCKO15516 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.82□□□□□ -2.28
CLOCKO15516 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.82□□□□□ -2.28
CLOCKO15516 AC002429.1-201ENST00000437672 148 ntBASIC0.82□□□□□ -2.28
CLOCKO15516 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.82□□□□□ -2.28
CLOCKO15516 STAG3L5P-204ENST00000443759 179 ntBASIC0.82□□□□□ -2.28
CLOCKO15516 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.82□□□□□ -2.28
CLOCKO15516 AC091179.3-201ENST00000474761 144 ntBASIC0.82□□□□□ -2.28
CLOCKO15516 SNORD79.1-201ENST00000516069 84 ntBASIC0.82□□□□□ -2.28
CLOCKO15516 Y_RNA.693-201ENST00000516641 110 ntBASIC0.82□□□□□ -2.28
CLOCKO15516 RNU6-1223P-201ENST00000517124 104 ntBASIC0.82□□□□□ -2.28
CLOCKO15516 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.82□□□□□ -2.28
CLOCKO15516 AC090049.2-201ENST00000550377 109 ntBASIC0.82□□□□□ -2.28
CLOCKO15516 PIGPP4-201ENST00000584447 307 ntBASIC0.82□□□□□ -2.28
CLOCKO15516 MIR4438-201ENST00000585271 93 ntBASIC0.82□□□□□ -2.28
CLOCKO15516 AC009248.2-201ENST00000619826 254 ntBASIC0.82□□□□□ -2.28
CLOCKO15516 AC006435.5-201ENST00000624486 112 ntBASIC0.82□□□□□ -2.28
CLOCKO15516 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
CLOCKO15516 Y_RNA.100-201ENST00000363141 102 ntBASIC0.81□□□□□ -2.28
CLOCKO15516 SNORD114-2-201ENST00000363953 78 ntBASIC0.81□□□□□ -2.28
CLOCKO15516 SNORD114-24-201ENST00000365029 72 ntBASIC0.81□□□□□ -2.28
CLOCKO15516 RNU6-95P-201ENST00000384697 107 ntBASIC0.81□□□□□ -2.28
CLOCKO15516 SNORD41-201ENST00000386967 70 ntBASIC0.81□□□□□ -2.28
CLOCKO15516 MTCO3P40-201ENST00000392516 676 ntBASIC0.81□□□□□ -2.28
CLOCKO15516 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.81□□□□□ -2.28
CLOCKO15516 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.81□□□□□ -2.28
CLOCKO15516 AL445305.1-201ENST00000432577 575 ntBASIC0.81□□□□□ -2.28
CLOCKO15516 MTND4P18-201ENST00000447010 465 ntBASIC0.81□□□□□ -2.28
CLOCKO15516 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.81□□□□□ -2.28
CLOCKO15516 MTND1P11-201ENST00000456661 876 ntBASIC0.81□□□□□ -2.28
CLOCKO15516 SNORD65B-201ENST00000459126 73 ntBASIC0.81□□□□□ -2.28
CLOCKO15516 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.81□□□□□ -2.28
CLOCKO15516 RNA5SP168-201ENST00000516642 112 ntBASIC0.81□□□□□ -2.28
CLOCKO15516 RN7SKP299-201ENST00000606679 301 ntBASIC0.81□□□□□ -2.28
CLOCKO15516 AC068137.4-201ENST00000638485 296 ntBASIC0.81□□□□□ -2.28
CLOCKO15516 Y_RNA.179-201ENST00000363844 90 ntBASIC0.8□□□□□ -2.28
CLOCKO15516 Y_RNA.373-201ENST00000365600 103 ntBASIC0.8□□□□□ -2.28
CLOCKO15516 RNU6-17P-201ENST00000384245 107 ntBASIC0.8□□□□□ -2.28
CLOCKO15516 RNU6-18P-201ENST00000384527 107 ntBASIC0.8□□□□□ -2.28
CLOCKO15516 MIR532-201ENST00000385025 91 ntBASIC0.8□□□□□ -2.28
CLOCKO15516 AL451046.2-201ENST00000403074 277 ntBASIC0.8□□□□□ -2.28
CLOCKO15516 SEPT14P3-201ENST00000439401 183 ntBASIC0.8□□□□□ -2.28
CLOCKO15516 AL732372.2-207ENST00000445840 183 ntBASIC0.8□□□□□ -2.28
CLOCKO15516 MRPS10P1-201ENST00000448483 130 ntBASIC0.8□□□□□ -2.28
CLOCKO15516 SEPT14P2-201ENST00000453405 183 ntBASIC0.8□□□□□ -2.28
CLOCKO15516 SNORD124-201ENST00000459577 104 ntBASIC0.8□□□□□ -2.28
CLOCKO15516 RPS27P22-201ENST00000478056 241 ntBASIC0.8□□□□□ -2.28
CLOCKO15516 TRBVA-201ENST00000498804 316 ntBASIC0.8□□□□□ -2.28
CLOCKO15516 SEPT14P4-201ENST00000513445 186 ntBASIC0.8□□□□□ -2.28
CLOCKO15516 ACA59.1-201ENST00000515966 143 ntBASIC0.8□□□□□ -2.28
CLOCKO15516 RNU6-322P-201ENST00000516010 103 ntBASIC0.8□□□□□ -2.28
CLOCKO15516 RNU6-351P-201ENST00000516097 100 ntBASIC0.8□□□□□ -2.28
CLOCKO15516 ACA64.5-201ENST00000516207 127 ntBASIC0.8□□□□□ -2.28
CLOCKO15516 FO082796.1-201ENST00000523795 183 ntBASIC0.8□□□□□ -2.28
CLOCKO15516 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.8□□□□□ -2.28
CLOCKO15516 ZNF519P2-201ENST00000557032 169 ntBASIC0.8□□□□□ -2.28
CLOCKO15516 MIR4698-201ENST00000577795 80 ntBASIC0.8□□□□□ -2.28
CLOCKO15516 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.8□□□□□ -2.28
CLOCKO15516 MIR6857-201ENST00000613267 93 ntBASIC0.8□□□□□ -2.28
CLOCKO15516 MIR6515-201ENST00000619843 57 ntBASIC0.8□□□□□ -2.28
CLOCKO15516 AL359880.1-201ENST00000621879 266 ntBASIC0.8□□□□□ -2.28
CLOCKO15516 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.8□□□□□ -2.28
CLOCKO15516 AC124864.2-201ENST00000624736 186 ntBASIC0.8□□□□□ -2.28
CLOCKO15516 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.8□□□□□ -2.28
CLOCKO15516 Y_RNA.124-201ENST00000363339 93 ntBASIC0.79□□□□□ -2.28
CLOCKO15516 RNY1-201ENST00000364228 113 ntBASIC0.79□□□□□ -2.28
CLOCKO15516 Y_RNA.372-201ENST00000365599 102 ntBASIC0.79□□□□□ -2.28
CLOCKO15516 RNU6-259P-201ENST00000383999 107 ntBASIC0.79□□□□□ -2.28
CLOCKO15516 RNU11-5P-201ENST00000391216 129 ntBASIC0.79□□□□□ -2.28
CLOCKO15516 AC114482.1-201ENST00000418010 247 ntBASIC0.79□□□□□ -2.28
CLOCKO15516 RPL30P16-201ENST00000419341 429 ntBASIC0.79□□□□□ -2.28
CLOCKO15516 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.79□□□□□ -2.28
CLOCKO15516 RPS4XP11-201ENST00000446897 772 ntBASIC0.79□□□□□ -2.28
CLOCKO15516 RPL30P10-201ENST00000488148 337 ntBASIC0.79□□□□□ -2.28
CLOCKO15516 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.79□□□□□ -2.28
CLOCKO15516 AC010486.3-201ENST00000511602 785 ntBASIC0.79□□□□□ -2.28
CLOCKO15516 AC093303.1-201ENST00000514549 295 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms