Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AL442163.3-201ENST00000554110 156 ntBASIC2.03□□□□□ -2.08
ATP2A1O14983 MIR3169-201ENST00000578032 83 ntBASIC2.03□□□□□ -2.08
ATP2A1O14983 AL109918.3-201ENST00000603072 338 ntBASIC2.03□□□□□ -2.08
ATP2A1O14983 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.03□□□□□ -2.08
ATP2A1O14983 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.03□□□□□ -2.08
ATP2A1O14983 AL138825.1-201ENST00000618587 192 ntBASIC2.03□□□□□ -2.08
ATP2A1O14983 uc_338.22-201ENST00000622722 187 ntBASIC2.03□□□□□ -2.08
ATP2A1O14983 MIR4272-201ENST00000635924 64 ntBASIC2.03□□□□□ -2.08
ATP2A1O14983 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.03□□□□□ -2.08
ATP2A1O14983 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.03□□□□□ -2.08
ATP2A1O14983 CENPCP1-201ENST00000533085 2578 ntBASIC2.03□□□□□ -2.09
ATP2A1O14983 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.02□□□□□ -2.09
ATP2A1O14983 MIR369-201ENST00000362155 70 ntBASIC2.02□□□□□ -2.09
ATP2A1O14983 Y_RNA.140-201ENST00000363474 103 ntBASIC2.02□□□□□ -2.09
ATP2A1O14983 SNORA16.1-201ENST00000364597 132 ntBASIC2.02□□□□□ -2.09
ATP2A1O14983 SNORD87-201ENST00000364849 89 ntBASIC2.02□□□□□ -2.09
ATP2A1O14983 RNU6-418P-201ENST00000384035 107 ntBASIC2.02□□□□□ -2.09
ATP2A1O14983 RNU2-40P-201ENST00000410833 196 ntBASIC2.02□□□□□ -2.09
ATP2A1O14983 AC096920.1-201ENST00000423991 241 ntBASIC2.02□□□□□ -2.09
ATP2A1O14983 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.02□□□□□ -2.09
ATP2A1O14983 RPL23AP3-201ENST00000453844 468 ntBASIC2.02□□□□□ -2.09
ATP2A1O14983 RNU7-57P-201ENST00000459540 60 ntBASIC2.02□□□□□ -2.09
ATP2A1O14983 MRPS17P9-201ENST00000511924 393 ntBASIC2.02□□□□□ -2.09
ATP2A1O14983 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.02□□□□□ -2.09
ATP2A1O14983 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.02□□□□□ -2.09
ATP2A1O14983 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.02□□□□□ -2.09
ATP2A1O14983 VN1R91P-201ENST00000594377 169 ntBASIC2.02□□□□□ -2.09
ATP2A1O14983 AC092447.9-201ENST00000603395 144 ntBASIC2.02□□□□□ -2.09
ATP2A1O14983 uc_338.20-201ENST00000621563 178 ntBASIC2.02□□□□□ -2.09
ATP2A1O14983 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
ATP2A1O14983 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
ATP2A1O14983 AC008555.8-201ENST00000623602 2168 ntBASIC2.01□□□□□ -2.09
ATP2A1O14983 Y_RNA.39-201ENST00000362620 98 ntBASIC2.01□□□□□ -2.09
ATP2A1O14983 RNU6-457P-201ENST00000363999 107 ntBASIC2.01□□□□□ -2.09
ATP2A1O14983 RNY3P4-201ENST00000384428 101 ntBASIC2.01□□□□□ -2.09
ATP2A1O14983 MIR676-201ENST00000390702 67 ntBASIC2.01□□□□□ -2.09
ATP2A1O14983 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
ATP2A1O14983 RNA5SP450-201ENST00000411206 102 ntBASIC2.01□□□□□ -2.09
ATP2A1O14983 UQCRBP2-201ENST00000447827 297 ntBASIC2.01□□□□□ -2.09
ATP2A1O14983 AC016717.1-201ENST00000448918 286 ntBASIC2.01□□□□□ -2.09
ATP2A1O14983 CHEK2P4-201ENST00000450340 246 ntBASIC2.01□□□□□ -2.09
ATP2A1O14983 AC074133.1-201ENST00000515696 183 ntBASIC2.01□□□□□ -2.09
ATP2A1O14983 AK6P2-201ENST00000549020 471 ntBASIC2.01□□□□□ -2.09
ATP2A1O14983 MIR4498-201ENST00000577599 66 ntBASIC2.01□□□□□ -2.09
ATP2A1O14983 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.01□□□□□ -2.09
ATP2A1O14983 AC091932.3-201ENST00000624223 323 ntBASIC2.01□□□□□ -2.09
ATP2A1O14983 snoZ196.1-201ENST00000625269 89 ntBASIC2.01□□□□□ -2.09
ATP2A1O14983 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.01□□□□□ -2.09
ATP2A1O14983 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.01□□□□□ -2.09
ATP2A1O14983 RNA5SP276-201ENST00000362580 94 ntBASIC2□□□□□ -2.09
ATP2A1O14983 Y_RNA.394-201ENST00000383942 103 ntBASIC2□□□□□ -2.09
ATP2A1O14983 Y_RNA.445-201ENST00000384168 102 ntBASIC2□□□□□ -2.09
ATP2A1O14983 MIR548B-201ENST00000385247 97 ntBASIC2□□□□□ -2.09
ATP2A1O14983 AC096644.2-201ENST00000429278 159 ntBASIC2□□□□□ -2.09
ATP2A1O14983 MTND2P29-201ENST00000438595 412 ntBASIC2□□□□□ -2.09
ATP2A1O14983 AL353689.1-201ENST00000438895 199 ntBASIC2□□□□□ -2.09
ATP2A1O14983 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2□□□□□ -2.09
ATP2A1O14983 RNU6-221P-201ENST00000459541 99 ntBASIC2□□□□□ -2.09
ATP2A1O14983 AP005660.1-201ENST00000522972 293 ntBASIC2□□□□□ -2.09
ATP2A1O14983 AC006600.1-201ENST00000572529 153 ntBASIC2□□□□□ -2.09
ATP2A1O14983 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2□□□□□ -2.09
ATP2A1O14983 MIR8081-201ENST00000611533 95 ntBASIC2□□□□□ -2.09
ATP2A1O14983 AL357075.2-201ENST00000614906 189 ntBASIC2□□□□□ -2.09
ATP2A1O14983 Six3os1_7.1-201ENST00000621512 201 ntBASIC2□□□□□ -2.09
ATP2A1O14983 AL606534.2-204ENST00000635008 178 ntBASIC2□□□□□ -2.09
ATP2A1O14983 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
ATP2A1O14983 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
ATP2A1O14983 Y_RNA.813-201ENST00000364639 102 ntBASIC1.99□□□□□ -2.09
ATP2A1O14983 RNY1P14-201ENST00000384426 108 ntBASIC1.99□□□□□ -2.09
ATP2A1O14983 MIR597-201ENST00000384968 97 ntBASIC1.99□□□□□ -2.09
ATP2A1O14983 SNORD12B-201ENST00000410433 91 ntBASIC1.99□□□□□ -2.09
ATP2A1O14983 RNA5SP489-201ENST00000410986 109 ntBASIC1.99□□□□□ -2.09
ATP2A1O14983 RNU6-57P-201ENST00000411348 103 ntBASIC1.99□□□□□ -2.09
ATP2A1O14983 MTCO3P19-201ENST00000415864 321 ntBASIC1.99□□□□□ -2.09
ATP2A1O14983 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.99□□□□□ -2.09
ATP2A1O14983 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.99□□□□□ -2.09
ATP2A1O14983 PCNPP5-201ENST00000452246 481 ntBASIC1.99□□□□□ -2.09
ATP2A1O14983 Y_RNA.631-201ENST00000459607 101 ntBASIC1.99□□□□□ -2.09
ATP2A1O14983 RNU4-77P-201ENST00000516692 156 ntBASIC1.99□□□□□ -2.09
ATP2A1O14983 AC023442.1-201ENST00000531247 422 ntBASIC1.99□□□□□ -2.09
ATP2A1O14983 AC005786.1-201ENST00000588553 154 ntBASIC1.99□□□□□ -2.09
ATP2A1O14983 AC005034.5-201ENST00000604219 466 ntBASIC1.99□□□□□ -2.09
ATP2A1O14983 MIR502-201ENST00000606349 86 ntBASIC1.99□□□□□ -2.09
ATP2A1O14983 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.99□□□□□ -2.09
ATP2A1O14983 AC134503.1-201ENST00000633048 54 ntBASIC1.99□□□□□ -2.09
ATP2A1O14983 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
ATP2A1O14983 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
ATP2A1O14983 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
ATP2A1O14983 AL159152.1-201ENST00000635019 2587 ntBASIC1.99□□□□□ -2.09
ATP2A1O14983 Y_RNA.128-201ENST00000363391 112 ntBASIC1.98□□□□□ -2.09
ATP2A1O14983 RNU6-1264P-201ENST00000383891 107 ntBASIC1.98□□□□□ -2.09
ATP2A1O14983 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
ATP2A1O14983 MIR1185-2-201ENST00000408687 86 ntBASIC1.98□□□□□ -2.09
ATP2A1O14983 ELOCP21-201ENST00000412558 336 ntBASIC1.98□□□□□ -2.09
ATP2A1O14983 MTCO2P12-201ENST00000427426 682 ntBASIC1.98□□□□□ -2.09
ATP2A1O14983 TOMM22P2-201ENST00000430735 237 ntBASIC1.98□□□□□ -2.09
ATP2A1O14983 SNORA40.9-201ENST00000515895 93 ntBASIC1.98□□□□□ -2.09
ATP2A1O14983 RNU6-475P-201ENST00000516073 104 ntBASIC1.98□□□□□ -2.09
ATP2A1O14983 SNORA40.14-201ENST00000516543 86 ntBASIC1.98□□□□□ -2.09
ATP2A1O14983 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms