Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.19□□□□□ -2.22
CLDN5O00501 Y_RNA.676-201ENST00000516393 96 ntBASIC1.19□□□□□ -2.22
CLDN5O00501 SNORA31.10-201ENST00000516482 106 ntBASIC1.19□□□□□ -2.22
CLDN5O00501 RNU6-107P-201ENST00000516643 102 ntBASIC1.19□□□□□ -2.22
CLDN5O00501 RNU6-1088P-201ENST00000516850 104 ntBASIC1.19□□□□□ -2.22
CLDN5O00501 RNU1-54P-201ENST00000517181 120 ntBASIC1.19□□□□□ -2.22
CLDN5O00501 AL590705.4-201ENST00000532209 134 ntBASIC1.19□□□□□ -2.22
CLDN5O00501 AL512310.8-201ENST00000550183 120 ntBASIC1.19□□□□□ -2.22
CLDN5O00501 MZT1P2-201ENST00000604387 248 ntBASIC1.19□□□□□ -2.22
CLDN5O00501 MIR8054-201ENST00000620877 86 ntBASIC1.19□□□□□ -2.22
CLDN5O00501 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.19□□□□□ -2.22
CLDN5O00501 ZNF299P-201ENST00000406845 1804 ntBASIC1.18□□□□□ -2.22
CLDN5O00501 RNU6-623P-201ENST00000363143 105 ntBASIC1.18□□□□□ -2.22
CLDN5O00501 SNORD114-27-201ENST00000363766 70 ntBASIC1.18□□□□□ -2.22
CLDN5O00501 RNU6-1013P-201ENST00000384180 107 ntBASIC1.18□□□□□ -2.22
CLDN5O00501 Y_RNA.573-201ENST00000384763 105 ntBASIC1.18□□□□□ -2.22
CLDN5O00501 MIR10B-201ENST00000385011 110 ntBASIC1.18□□□□□ -2.22
CLDN5O00501 RN7SKP200-201ENST00000410564 320 ntBASIC1.18□□□□□ -2.22
CLDN5O00501 RNU6-1148P-201ENST00000410992 104 ntBASIC1.18□□□□□ -2.22
CLDN5O00501 AL589823.1-201ENST00000429577 183 ntBASIC1.18□□□□□ -2.22
CLDN5O00501 USP9YP30-201ENST00000430729 455 ntBASIC1.18□□□□□ -2.22
CLDN5O00501 AC015922.2-201ENST00000435593 184 ntBASIC1.18□□□□□ -2.22
CLDN5O00501 AC105313.1-201ENST00000509121 353 ntBASIC1.18□□□□□ -2.22
CLDN5O00501 APOOP3-201ENST00000536787 586 ntBASIC1.18□□□□□ -2.22
CLDN5O00501 AC093913.1-201ENST00000614178 329 ntBASIC1.18□□□□□ -2.22
CLDN5O00501 MIR6128-201ENST00000615528 109 ntBASIC1.18□□□□□ -2.22
CLDN5O00501 AL133216.2-202ENST00000634512 349 ntBASIC1.18□□□□□ -2.22
CLDN5O00501 MIR3662-201ENST00000637030 95 ntBASIC1.18□□□□□ -2.22
CLDN5O00501 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
CLDN5O00501 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
CLDN5O00501 Y_RNA.3-201ENST00000362331 103 ntBASIC1.17□□□□□ -2.22
CLDN5O00501 RNA5SP327-201ENST00000362494 101 ntBASIC1.17□□□□□ -2.22
CLDN5O00501 Y_RNA.48-201ENST00000362710 103 ntBASIC1.17□□□□□ -2.22
CLDN5O00501 Y_RNA.184-201ENST00000363884 108 ntBASIC1.17□□□□□ -2.22
CLDN5O00501 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CLDN5O00501 AL356776.1-201ENST00000406574 447 ntBASIC1.17□□□□□ -2.22
CLDN5O00501 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.17□□□□□ -2.22
CLDN5O00501 USMG5P1-201ENST00000425964 177 ntBASIC1.17□□□□□ -2.22
CLDN5O00501 MTND4P18-201ENST00000447010 465 ntBASIC1.17□□□□□ -2.22
CLDN5O00501 AC093303.1-201ENST00000514549 295 ntBASIC1.17□□□□□ -2.22
CLDN5O00501 RN7SKP88-201ENST00000516847 250 ntBASIC1.17□□□□□ -2.22
CLDN5O00501 RNU7-128P-201ENST00000517247 62 ntBASIC1.17□□□□□ -2.22
CLDN5O00501 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.17□□□□□ -2.22
CLDN5O00501 AL050343.2-201ENST00000607338 280 ntBASIC1.17□□□□□ -2.22
CLDN5O00501 AL355802.3-201ENST00000607571 545 ntBASIC1.17□□□□□ -2.22
CLDN5O00501 AC010999.1-201ENST00000611856 324 ntBASIC1.17□□□□□ -2.22
CLDN5O00501 7SK.8-201ENST00000612110 250 ntBASIC1.17□□□□□ -2.22
CLDN5O00501 7SK.11-201ENST00000615477 250 ntBASIC1.17□□□□□ -2.22
CLDN5O00501 U6.73-201ENST00000619194 103 ntBASIC1.17□□□□□ -2.22
CLDN5O00501 MIR8065-201ENST00000620577 100 ntBASIC1.17□□□□□ -2.22
CLDN5O00501 7SK.13-201ENST00000622040 250 ntBASIC1.17□□□□□ -2.22
CLDN5O00501 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CLDN5O00501 RNU6-222P-201ENST00000362438 107 ntBASIC1.16□□□□□ -2.22
CLDN5O00501 Y_RNA.157-201ENST00000363638 102 ntBASIC1.16□□□□□ -2.22
CLDN5O00501 SNORA25.8-201ENST00000364831 128 ntBASIC1.16□□□□□ -2.22
CLDN5O00501 RNU6-440P-201ENST00000390882 105 ntBASIC1.16□□□□□ -2.22
CLDN5O00501 MRPL42P3-201ENST00000401492 326 ntBASIC1.16□□□□□ -2.22
CLDN5O00501 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.16□□□□□ -2.22
CLDN5O00501 USP9YP16-201ENST00000430287 407 ntBASIC1.16□□□□□ -2.22
CLDN5O00501 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.16□□□□□ -2.22
CLDN5O00501 MTND3P23-201ENST00000431980 347 ntBASIC1.16□□□□□ -2.22
CLDN5O00501 USP9YP23-201ENST00000455085 407 ntBASIC1.16□□□□□ -2.22
CLDN5O00501 RNU7-99P-201ENST00000516271 62 ntBASIC1.16□□□□□ -2.22
CLDN5O00501 RNU6-720P-201ENST00000516363 108 ntBASIC1.16□□□□□ -2.22
CLDN5O00501 RNU6-566P-201ENST00000516790 107 ntBASIC1.16□□□□□ -2.22
CLDN5O00501 RNA5SP102-201ENST00000516865 106 ntBASIC1.16□□□□□ -2.22
CLDN5O00501 Y_RNA.706-201ENST00000516933 99 ntBASIC1.16□□□□□ -2.22
CLDN5O00501 AC091144.1-201ENST00000519573 138 ntBASIC1.16□□□□□ -2.22
CLDN5O00501 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.16□□□□□ -2.22
CLDN5O00501 AC023157.2-201ENST00000540596 141 ntBASIC1.16□□□□□ -2.22
CLDN5O00501 MIR4438-201ENST00000585271 93 ntBASIC1.16□□□□□ -2.22
CLDN5O00501 MIR4295-201ENST00000585286 85 ntBASIC1.16□□□□□ -2.22
CLDN5O00501 AL021879.1-201ENST00000611756 288 ntBASIC1.16□□□□□ -2.22
CLDN5O00501 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
CLDN5O00501 MIR96-201ENST00000362288 78 ntBASIC1.15□□□□□ -2.23
CLDN5O00501 RNU6-595P-201ENST00000363944 107 ntBASIC1.15□□□□□ -2.23
CLDN5O00501 Y_RNA.238-201ENST00000364441 102 ntBASIC1.15□□□□□ -2.23
CLDN5O00501 Y_RNA.318-201ENST00000365131 97 ntBASIC1.15□□□□□ -2.23
CLDN5O00501 RNU6-596P-201ENST00000365395 98 ntBASIC1.15□□□□□ -2.23
CLDN5O00501 Y_RNA.453-201ENST00000384223 109 ntBASIC1.15□□□□□ -2.23
CLDN5O00501 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
CLDN5O00501 SNORD115-47-201ENST00000391226 86 ntBASIC1.15□□□□□ -2.23
CLDN5O00501 RNA5SP118-201ENST00000410385 109 ntBASIC1.15□□□□□ -2.23
CLDN5O00501 AL591704.2-201ENST00000421658 181 ntBASIC1.15□□□□□ -2.23
CLDN5O00501 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.15□□□□□ -2.23
CLDN5O00501 PGBD4P5-201ENST00000445958 426 ntBASIC1.15□□□□□ -2.23
CLDN5O00501 MTND1P17-201ENST00000448961 204 ntBASIC1.15□□□□□ -2.23
CLDN5O00501 RPS27P22-201ENST00000478056 241 ntBASIC1.15□□□□□ -2.23
CLDN5O00501 RAB11AP2-201ENST00000545905 639 ntBASIC1.15□□□□□ -2.23
CLDN5O00501 EIF1P4-201ENST00000572664 335 ntBASIC1.15□□□□□ -2.23
CLDN5O00501 MIR4790-201ENST00000577799 79 ntBASIC1.15□□□□□ -2.23
CLDN5O00501 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.15□□□□□ -2.23
CLDN5O00501 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CLDN5O00501 Y_RNA.516-201ENST00000384541 124 ntBASIC1.14□□□□□ -2.23
CLDN5O00501 AL034345.1-201ENST00000407768 123 ntBASIC1.14□□□□□ -2.23
CLDN5O00501 AL139396.1-201ENST00000421137 167 ntBASIC1.14□□□□□ -2.23
CLDN5O00501 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.14□□□□□ -2.23
CLDN5O00501 SNORD65B-201ENST00000459126 73 ntBASIC1.14□□□□□ -2.23
CLDN5O00501 AC087343.1-201ENST00000477341 475 ntBASIC1.14□□□□□ -2.23
CLDN5O00501 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 425.6 ms