Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 MIR6845-201ENST00000613182 61 ntBASIC1.69□□□□□ -2.14
RTCAO00442 AC138305.3-201ENST00000624988 240 ntBASIC1.69□□□□□ -2.14
RTCAO00442 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.69□□□□□ -2.14
RTCAO00442 AL159152.1-201ENST00000635019 2587 ntBASIC1.69□□□□□ -2.14
RTCAO00442 Y_RNA.146-201ENST00000363549 102 ntBASIC1.68□□□□□ -2.14
RTCAO00442 Y_RNA.252-201ENST00000364556 101 ntBASIC1.68□□□□□ -2.14
RTCAO00442 Y_RNA.358-201ENST00000365491 99 ntBASIC1.68□□□□□ -2.14
RTCAO00442 RNU6-418P-201ENST00000384035 107 ntBASIC1.68□□□□□ -2.14
RTCAO00442 Y_RNA.431-201ENST00000384086 102 ntBASIC1.68□□□□□ -2.14
RTCAO00442 Y_RNA.463-201ENST00000384271 102 ntBASIC1.68□□□□□ -2.14
RTCAO00442 RNU6-318P-201ENST00000384283 103 ntBASIC1.68□□□□□ -2.14
RTCAO00442 RNU6-997P-201ENST00000384725 107 ntBASIC1.68□□□□□ -2.14
RTCAO00442 MIR1185-2-201ENST00000408687 86 ntBASIC1.68□□□□□ -2.14
RTCAO00442 AC060773.1-201ENST00000421698 310 ntBASIC1.68□□□□□ -2.14
RTCAO00442 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.68□□□□□ -2.14
RTCAO00442 MTND4P28-201ENST00000426217 387 ntBASIC1.68□□□□□ -2.14
RTCAO00442 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.68□□□□□ -2.14
RTCAO00442 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.68□□□□□ -2.14
RTCAO00442 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.68□□□□□ -2.14
RTCAO00442 AC107393.1-201ENST00000512403 346 ntBASIC1.68□□□□□ -2.14
RTCAO00442 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.68□□□□□ -2.14
RTCAO00442 RNA5SP481-201ENST00000516814 122 ntBASIC1.68□□□□□ -2.14
RTCAO00442 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.68□□□□□ -2.14
RTCAO00442 MZT1P2-201ENST00000604387 248 ntBASIC1.68□□□□□ -2.14
RTCAO00442 AL133255.1-201ENST00000606374 441 ntBASIC1.68□□□□□ -2.14
RTCAO00442 MIR8081-201ENST00000611533 95 ntBASIC1.68□□□□□ -2.14
RTCAO00442 AC084781.2-201ENST00000615568 161 ntBASIC1.68□□□□□ -2.14
RTCAO00442 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.68□□□□□ -2.14
RTCAO00442 AC084768.2-201ENST00000622736 221 ntBASIC1.68□□□□□ -2.14
RTCAO00442 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.68□□□□□ -2.14
RTCAO00442 RNU6-1301P-201ENST00000362724 104 ntBASIC1.67□□□□□ -2.14
RTCAO00442 SNORD33-201ENST00000362761 85 ntBASIC1.67□□□□□ -2.14
RTCAO00442 RNU1-115P-201ENST00000365329 160 ntBASIC1.67□□□□□ -2.14
RTCAO00442 Y_RNA.395-201ENST00000383945 109 ntBASIC1.67□□□□□ -2.14
RTCAO00442 Y_RNA.415-201ENST00000384012 112 ntBASIC1.67□□□□□ -2.14
RTCAO00442 Y_RNA.595-201ENST00000410403 105 ntBASIC1.67□□□□□ -2.14
RTCAO00442 RNU6-1001P-201ENST00000411265 100 ntBASIC1.67□□□□□ -2.14
RTCAO00442 RNU6-1304P-201ENST00000411374 106 ntBASIC1.67□□□□□ -2.14
RTCAO00442 AC008134.1-201ENST00000420943 193 ntBASIC1.67□□□□□ -2.14
RTCAO00442 TOMM22P2-201ENST00000430735 237 ntBASIC1.67□□□□□ -2.14
RTCAO00442 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.67□□□□□ -2.14
RTCAO00442 JTBP1-201ENST00000441314 247 ntBASIC1.67□□□□□ -2.14
RTCAO00442 AC010095.1-201ENST00000443543 144 ntBASIC1.67□□□□□ -2.14
RTCAO00442 ATP5J2P3-201ENST00000451550 258 ntBASIC1.67□□□□□ -2.14
RTCAO00442 U8.22-201ENST00000459141 133 ntBASIC1.67□□□□□ -2.14
RTCAO00442 snoU13.15-201ENST00000459407 104 ntBASIC1.67□□□□□ -2.14
RTCAO00442 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.67□□□□□ -2.14
RTCAO00442 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.67□□□□□ -2.14
RTCAO00442 RNU6-120P-201ENST00000516077 103 ntBASIC1.67□□□□□ -2.14
RTCAO00442 RNU6-976P-201ENST00000516086 111 ntBASIC1.67□□□□□ -2.14
RTCAO00442 MIR3684-201ENST00000579779 74 ntBASIC1.67□□□□□ -2.14
RTCAO00442 MIR1244-1-201ENST00000612829 85 ntBASIC1.67□□□□□ -2.14
RTCAO00442 MIR1244-3-201ENST00000635744 85 ntBASIC1.67□□□□□ -2.14
RTCAO00442 MIR1244-2-201ENST00000636449 85 ntBASIC1.67□□□□□ -2.14
RTCAO00442 MIR1244-4-202ENST00000636813 85 ntBASIC1.67□□□□□ -2.14
RTCAO00442 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
RTCAO00442 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
RTCAO00442 SNORD87-201ENST00000364849 89 ntBASIC1.66□□□□□ -2.14
RTCAO00442 RNU6-1264P-201ENST00000383891 107 ntBASIC1.66□□□□□ -2.14
RTCAO00442 RNU6-439P-201ENST00000384188 106 ntBASIC1.66□□□□□ -2.14
RTCAO00442 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.66□□□□□ -2.14
RTCAO00442 ELOCP21-201ENST00000412558 336 ntBASIC1.66□□□□□ -2.14
RTCAO00442 AC114482.1-201ENST00000418010 247 ntBASIC1.66□□□□□ -2.14
RTCAO00442 AC018865.2-201ENST00000423631 129 ntBASIC1.66□□□□□ -2.14
RTCAO00442 CST2P1-201ENST00000425770 87 ntBASIC1.66□□□□□ -2.14
RTCAO00442 AC069257.2-201ENST00000441819 155 ntBASIC1.66□□□□□ -2.14
RTCAO00442 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.66□□□□□ -2.14
RTCAO00442 RPL26P26-201ENST00000480251 434 ntBASIC1.66□□□□□ -2.14
RTCAO00442 AC011406.1-201ENST00000512440 370 ntBASIC1.66□□□□□ -2.14
RTCAO00442 RNU1-117P-201ENST00000517041 158 ntBASIC1.66□□□□□ -2.14
RTCAO00442 RNU6-699P-201ENST00000517081 110 ntBASIC1.66□□□□□ -2.14
RTCAO00442 AC025647.1-201ENST00000517879 253 ntBASIC1.66□□□□□ -2.14
RTCAO00442 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.65□□□□□ -2.14
RTCAO00442 Y_RNA.58-201ENST00000362807 102 ntBASIC1.65□□□□□ -2.15
RTCAO00442 Y_RNA.112-201ENST00000363250 102 ntBASIC1.65□□□□□ -2.15
RTCAO00442 Y_RNA.154-201ENST00000363624 102 ntBASIC1.65□□□□□ -2.15
RTCAO00442 RNU6-1019P-201ENST00000364424 107 ntBASIC1.65□□□□□ -2.15
RTCAO00442 SNORD48-201ENST00000364953 64 ntBASIC1.65□□□□□ -2.15
RTCAO00442 RNY3P1-201ENST00000365085 102 ntBASIC1.65□□□□□ -2.15
RTCAO00442 RNY3-201ENST00000365484 102 ntBASIC1.65□□□□□ -2.15
RTCAO00442 RNY3P4-201ENST00000384428 101 ntBASIC1.65□□□□□ -2.15
RTCAO00442 MIR515-2-201ENST00000384883 83 ntBASIC1.65□□□□□ -2.15
RTCAO00442 MIR515-1-201ENST00000384884 83 ntBASIC1.65□□□□□ -2.15
RTCAO00442 AC016909.1-201ENST00000415916 166 ntBASIC1.65□□□□□ -2.15
RTCAO00442 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.65□□□□□ -2.15
RTCAO00442 MRPS18CP6-201ENST00000423587 223 ntBASIC1.65□□□□□ -2.15
RTCAO00442 AL445305.1-201ENST00000432577 575 ntBASIC1.65□□□□□ -2.15
RTCAO00442 AC099677.2-201ENST00000436385 175 ntBASIC1.65□□□□□ -2.15
RTCAO00442 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.65□□□□□ -2.15
RTCAO00442 AC016717.1-201ENST00000448918 286 ntBASIC1.65□□□□□ -2.15
RTCAO00442 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.65□□□□□ -2.15
RTCAO00442 PCNPP5-201ENST00000452246 481 ntBASIC1.65□□□□□ -2.15
RTCAO00442 RNU7-87P-201ENST00000459343 62 ntBASIC1.65□□□□□ -2.15
RTCAO00442 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.65□□□□□ -2.15
RTCAO00442 RNA5SP445-201ENST00000515889 115 ntBASIC1.65□□□□□ -2.15
RTCAO00442 RNU6-1146P-201ENST00000516282 102 ntBASIC1.65□□□□□ -2.15
RTCAO00442 RNU6-295P-201ENST00000516901 104 ntBASIC1.65□□□□□ -2.15
RTCAO00442 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.65□□□□□ -2.15
RTCAO00442 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.65□□□□□ -2.15
RTCAO00442 AL442163.3-201ENST00000554110 156 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms