Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.79□□□□□ -2.12
O00370 RNA5SP458-201ENST00000516188 119 ntBASIC1.79□□□□□ -2.12
O00370 SUB1P3-201ENST00000564581 315 ntBASIC1.79□□□□□ -2.12
O00370 MIR3169-201ENST00000578032 83 ntBASIC1.79□□□□□ -2.12
O00370 MIR3683-201ENST00000580847 82 ntBASIC1.79□□□□□ -2.12
O00370 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.79□□□□□ -2.12
O00370 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.79□□□□□ -2.12
O00370 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
O00370 Y_RNA.140-201ENST00000363474 103 ntBASIC1.78□□□□□ -2.12
O00370 RNU6-975P-201ENST00000384296 105 ntBASIC1.78□□□□□ -2.12
O00370 MIR548B-201ENST00000385247 97 ntBASIC1.78□□□□□ -2.12
O00370 MIR1253-201ENST00000408273 105 ntBASIC1.78□□□□□ -2.12
O00370 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.78□□□□□ -2.12
O00370 MTCO1P44-201ENST00000441935 243 ntBASIC1.78□□□□□ -2.12
O00370 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.78□□□□□ -2.12
O00370 ATP5J2P3-201ENST00000451550 258 ntBASIC1.78□□□□□ -2.12
O00370 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.78□□□□□ -2.12
O00370 RNU6-948P-201ENST00000516374 107 ntBASIC1.78□□□□□ -2.12
O00370 SNORD116.3-201ENST00000517176 78 ntBASIC1.78□□□□□ -2.12
O00370 AC144568.1-201ENST00000520139 137 ntBASIC1.78□□□□□ -2.12
O00370 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.78□□□□□ -2.12
O00370 MIR5094-201ENST00000578766 85 ntBASIC1.78□□□□□ -2.12
O00370 AC103810.8-201ENST00000607347 118 ntBASIC1.78□□□□□ -2.12
O00370 AC087588.2-201ENST00000617667 426 ntBASIC1.78□□□□□ -2.12
O00370 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.78□□□□□ -2.12
O00370 AC008873.1-201ENST00000625051 138 ntBASIC1.78□□□□□ -2.12
O00370 MIR369-201ENST00000362155 70 ntBASIC1.77□□□□□ -2.13
O00370 Y_RNA.463-201ENST00000384271 102 ntBASIC1.77□□□□□ -2.13
O00370 Y_RNA.592-201ENST00000410274 109 ntBASIC1.77□□□□□ -2.13
O00370 AC099799.1-201ENST00000439809 192 ntBASIC1.77□□□□□ -2.13
O00370 AL357134.1-201ENST00000445848 426 ntBASIC1.77□□□□□ -2.13
O00370 RNVU1-2-201ENST00000516326 135 ntBASIC1.77□□□□□ -2.13
O00370 AC091144.1-201ENST00000519573 138 ntBASIC1.77□□□□□ -2.13
O00370 AC027419.1-201ENST00000522976 328 ntBASIC1.77□□□□□ -2.13
O00370 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.77□□□□□ -2.13
O00370 CBX3P4-201ENST00000538909 354 ntBASIC1.77□□□□□ -2.13
O00370 AC022254.1-201ENST00000567857 235 ntBASIC1.77□□□□□ -2.13
O00370 AC006600.1-201ENST00000572529 153 ntBASIC1.77□□□□□ -2.13
O00370 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.77□□□□□ -2.13
O00370 AL357075.2-201ENST00000614906 189 ntBASIC1.77□□□□□ -2.13
O00370 snoZ196.1-201ENST00000625269 89 ntBASIC1.77□□□□□ -2.13
O00370 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.77□□□□□ -2.13
O00370 RNU4-42P-201ENST00000364738 142 ntBASIC1.76□□□□□ -2.13
O00370 RNA5SP363-201ENST00000365072 115 ntBASIC1.76□□□□□ -2.13
O00370 Y_RNA.315-201ENST00000365117 102 ntBASIC1.76□□□□□ -2.13
O00370 RNU6-1235P-201ENST00000384559 107 ntBASIC1.76□□□□□ -2.13
O00370 SNORD12B-201ENST00000410433 91 ntBASIC1.76□□□□□ -2.13
O00370 AF228730.4-201ENST00000421457 183 ntBASIC1.76□□□□□ -2.13
O00370 RNU6-498P-201ENST00000459468 107 ntBASIC1.76□□□□□ -2.13
O00370 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.76□□□□□ -2.13
O00370 AC008834.1-201ENST00000511612 175 ntBASIC1.76□□□□□ -2.13
O00370 RNU6-1170P-201ENST00000515974 106 ntBASIC1.76□□□□□ -2.13
O00370 RNU6-856P-201ENST00000516959 98 ntBASIC1.76□□□□□ -2.13
O00370 SNORA44.1-201ENST00000517031 108 ntBASIC1.76□□□□□ -2.13
O00370 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.76□□□□□ -2.13
O00370 HSBP1P1-201ENST00000555205 166 ntBASIC1.76□□□□□ -2.13
O00370 U2.1-201ENST00000618978 145 ntBASIC1.76□□□□□ -2.13
O00370 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
O00370 RNU6-1115P-201ENST00000362490 106 ntBASIC1.75□□□□□ -2.13
O00370 RNU6-862P-201ENST00000362804 105 ntBASIC1.75□□□□□ -2.13
O00370 RNU6-318P-201ENST00000384283 103 ntBASIC1.75□□□□□ -2.13
O00370 SNORA67.2-201ENST00000384300 149 ntBASIC1.75□□□□□ -2.13
O00370 Y_RNA.509-201ENST00000384506 99 ntBASIC1.75□□□□□ -2.13
O00370 MIR329-1-201ENST00000385028 80 ntBASIC1.75□□□□□ -2.13
O00370 RNU6-308P-201ENST00000390957 107 ntBASIC1.75□□□□□ -2.13
O00370 AC009310.1-201ENST00000414414 451 ntBASIC1.75□□□□□ -2.13
O00370 AC060773.1-201ENST00000421698 310 ntBASIC1.75□□□□□ -2.13
O00370 MTND4P28-201ENST00000426217 387 ntBASIC1.75□□□□□ -2.13
O00370 RNU1-131P-201ENST00000458943 161 ntBASIC1.75□□□□□ -2.13
O00370 RNU7-152P-201ENST00000458982 64 ntBASIC1.75□□□□□ -2.13
O00370 AC067942.3-201ENST00000512025 362 ntBASIC1.75□□□□□ -2.13
O00370 AC011406.1-201ENST00000512440 370 ntBASIC1.75□□□□□ -2.13
O00370 SNORA25.15-201ENST00000516487 89 ntBASIC1.75□□□□□ -2.13
O00370 AC087441.2-201ENST00000529141 262 ntBASIC1.75□□□□□ -2.13
O00370 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.75□□□□□ -2.13
O00370 AK6P2-201ENST00000549020 471 ntBASIC1.75□□□□□ -2.13
O00370 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.75□□□□□ -2.13
O00370 AC092447.9-201ENST00000603395 144 ntBASIC1.75□□□□□ -2.13
O00370 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.75□□□□□ -2.13
O00370 AC090574.1-201ENST00000623186 233 ntBASIC1.75□□□□□ -2.13
O00370 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
O00370 MIR126-201ENST00000362291 85 ntBASIC1.74□□□□□ -2.13
O00370 RNU6-1301P-201ENST00000362724 104 ntBASIC1.74□□□□□ -2.13
O00370 RNU6-1266P-201ENST00000362794 105 ntBASIC1.74□□□□□ -2.13
O00370 Y_RNA.61-201ENST00000362835 102 ntBASIC1.74□□□□□ -2.13
O00370 U3.8-201ENST00000363675 217 ntBASIC1.74□□□□□ -2.13
O00370 RNU1-96P-201ENST00000364163 162 ntBASIC1.74□□□□□ -2.13
O00370 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
O00370 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.74□□□□□ -2.13
O00370 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.74□□□□□ -2.13
O00370 RNU6-625P-201ENST00000459412 107 ntBASIC1.74□□□□□ -2.13
O00370 SNORA40.9-201ENST00000515895 93 ntBASIC1.74□□□□□ -2.13
O00370 RNU2-34P-201ENST00000516534 121 ntBASIC1.74□□□□□ -2.13
O00370 MIR4285-201ENST00000581001 85 ntBASIC1.74□□□□□ -2.13
O00370 AC005786.1-201ENST00000588553 154 ntBASIC1.74□□□□□ -2.13
O00370 C8orf59P2-201ENST00000603441 271 ntBASIC1.74□□□□□ -2.13
O00370 MIR502-201ENST00000606349 86 ntBASIC1.74□□□□□ -2.13
O00370 AL050343.2-201ENST00000607338 280 ntBASIC1.74□□□□□ -2.13
O00370 AC006157.1-201ENST00000611750 366 ntBASIC1.74□□□□□ -2.13
O00370 AC011476.5-201ENST00000615594 130 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms