Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 SNORD116-1-201ENST00000384335 95 ntBASIC0.96□□□□□ -2.26
CDC7O00311 MIR153-2-201ENST00000385225 87 ntBASIC0.96□□□□□ -2.26
CDC7O00311 MIR1185-2-201ENST00000408687 86 ntBASIC0.96□□□□□ -2.26
CDC7O00311 RNU6-908P-201ENST00000410160 94 ntBASIC0.96□□□□□ -2.26
CDC7O00311 RN7SKP200-201ENST00000410564 320 ntBASIC0.96□□□□□ -2.26
CDC7O00311 PGBD4P5-201ENST00000445958 426 ntBASIC0.96□□□□□ -2.26
CDC7O00311 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.96□□□□□ -2.26
CDC7O00311 RPL39P38-201ENST00000467018 153 ntBASIC0.96□□□□□ -2.26
CDC7O00311 AC092991.1-201ENST00000477176 376 ntBASIC0.96□□□□□ -2.26
CDC7O00311 RPL30P10-201ENST00000488148 337 ntBASIC0.96□□□□□ -2.26
CDC7O00311 UBL5P4-201ENST00000562584 236 ntBASIC0.96□□□□□ -2.26
CDC7O00311 MIR5695-201ENST00000579717 85 ntBASIC0.96□□□□□ -2.26
CDC7O00311 AC022432.1-201ENST00000595739 310 ntBASIC0.96□□□□□ -2.26
CDC7O00311 DISC2.1-201ENST00000612827 205 ntBASIC0.96□□□□□ -2.26
CDC7O00311 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.96□□□□□ -2.26
CDC7O00311 AL138726.1-201ENST00000614873 333 ntBASIC0.96□□□□□ -2.26
CDC7O00311 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.96□□□□□ -2.26
CDC7O00311 U3.8-201ENST00000363675 217 ntBASIC0.95□□□□□ -2.26
CDC7O00311 Y_RNA.256-201ENST00000364594 104 ntBASIC0.95□□□□□ -2.26
CDC7O00311 RPL37P10-201ENST00000412884 288 ntBASIC0.95□□□□□ -2.26
CDC7O00311 RPL30P16-201ENST00000419341 429 ntBASIC0.95□□□□□ -2.26
CDC7O00311 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.95□□□□□ -2.26
CDC7O00311 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.95□□□□□ -2.26
CDC7O00311 DYNLT3P2-201ENST00000442517 295 ntBASIC0.95□□□□□ -2.26
CDC7O00311 NDUFB4P10-201ENST00000452541 359 ntBASIC0.95□□□□□ -2.26
CDC7O00311 AC091179.3-201ENST00000474761 144 ntBASIC0.95□□□□□ -2.26
CDC7O00311 AL022345.2-201ENST00000606307 135 ntBASIC0.95□□□□□ -2.26
CDC7O00311 BX284668.6-201ENST00000606899 438 ntBASIC0.95□□□□□ -2.26
CDC7O00311 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.95□□□□□ -2.26
CDC7O00311 MIR6788-201ENST00000618842 66 ntBASIC0.95□□□□□ -2.26
CDC7O00311 U6.73-201ENST00000619194 103 ntBASIC0.95□□□□□ -2.26
CDC7O00311 AC027335.2-201ENST00000624030 375 ntBASIC0.95□□□□□ -2.26
CDC7O00311 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.95□□□□□ -2.26
CDC7O00311 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.95□□□□□ -2.26
CDC7O00311 RNU6-451P-201ENST00000362921 107 ntBASIC0.94□□□□□ -2.26
CDC7O00311 Y_RNA.354-201ENST00000365448 111 ntBASIC0.94□□□□□ -2.26
CDC7O00311 SNORA25-201ENST00000384384 134 ntBASIC0.94□□□□□ -2.26
CDC7O00311 RNU6-505P-201ENST00000384427 107 ntBASIC0.94□□□□□ -2.26
CDC7O00311 MIR222-201ENST00000384992 110 ntBASIC0.94□□□□□ -2.26
CDC7O00311 RNU6-440P-201ENST00000390882 105 ntBASIC0.94□□□□□ -2.26
CDC7O00311 MRPL42P3-201ENST00000401492 326 ntBASIC0.94□□□□□ -2.26
CDC7O00311 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.94□□□□□ -2.26
CDC7O00311 MIR548J-201ENST00000408833 112 ntBASIC0.94□□□□□ -2.26
CDC7O00311 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.94□□□□□ -2.26
CDC7O00311 AC098826.2-201ENST00000452011 651 ntBASIC0.94□□□□□ -2.26
CDC7O00311 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.94□□□□□ -2.26
CDC7O00311 TRBVA-201ENST00000498804 316 ntBASIC0.94□□□□□ -2.26
CDC7O00311 RNU6-256P-201ENST00000516747 97 ntBASIC0.94□□□□□ -2.26
CDC7O00311 RNU6-1198P-201ENST00000516904 67 ntBASIC0.94□□□□□ -2.26
CDC7O00311 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.94□□□□□ -2.26
CDC7O00311 HSPE1P19-201ENST00000603327 295 ntBASIC0.94□□□□□ -2.26
CDC7O00311 AL021879.1-201ENST00000611756 288 ntBASIC0.94□□□□□ -2.26
CDC7O00311 AC009248.2-201ENST00000619826 254 ntBASIC0.94□□□□□ -2.26
CDC7O00311 AC106754.2-201ENST00000623006 233 ntBASIC0.94□□□□□ -2.26
CDC7O00311 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
CDC7O00311 RNU6-1266P-201ENST00000362794 105 ntBASIC0.93□□□□□ -2.26
CDC7O00311 SNORA70.7-201ENST00000384159 133 ntBASIC0.93□□□□□ -2.26
CDC7O00311 Y_RNA.530-201ENST00000384587 101 ntBASIC0.93□□□□□ -2.26
CDC7O00311 RNU6-541P-201ENST00000384709 110 ntBASIC0.93□□□□□ -2.26
CDC7O00311 RNU2-16P-201ENST00000410712 136 ntBASIC0.93□□□□□ -2.26
CDC7O00311 RPS23P4-201ENST00000487908 423 ntBASIC0.93□□□□□ -2.26
CDC7O00311 ACA59.1-201ENST00000515966 143 ntBASIC0.93□□□□□ -2.26
CDC7O00311 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.93□□□□□ -2.26
CDC7O00311 AC004584.2-201ENST00000570407 410 ntBASIC0.93□□□□□ -2.26
CDC7O00311 Y_RNA.135-201ENST00000363439 95 ntBASIC0.92□□□□□ -2.26
CDC7O00311 SNORD114-26-201ENST00000363543 72 ntBASIC0.92□□□□□ -2.26
CDC7O00311 RNY3P3-201ENST00000363816 102 ntBASIC0.92□□□□□ -2.26
CDC7O00311 RNU6-1187P-201ENST00000364771 110 ntBASIC0.92□□□□□ -2.26
CDC7O00311 RNU6-793P-201ENST00000384233 104 ntBASIC0.92□□□□□ -2.26
CDC7O00311 RNU6-17P-201ENST00000384245 107 ntBASIC0.92□□□□□ -2.26
CDC7O00311 RNU6-18P-201ENST00000384527 107 ntBASIC0.92□□□□□ -2.26
CDC7O00311 MIR598-201ENST00000384868 97 ntBASIC0.92□□□□□ -2.26
CDC7O00311 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
CDC7O00311 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
CDC7O00311 RNU7-99P-201ENST00000516271 62 ntBASIC0.92□□□□□ -2.26
CDC7O00311 RNU6-113P-201ENST00000516653 101 ntBASIC0.92□□□□□ -2.26
CDC7O00311 RNU6-922P-201ENST00000516753 99 ntBASIC0.92□□□□□ -2.26
CDC7O00311 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.92□□□□□ -2.26
CDC7O00311 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.92□□□□□ -2.26
CDC7O00311 AC019193.3-201ENST00000609144 554 ntBASIC0.92□□□□□ -2.26
CDC7O00311 PVT1_3.1-201ENST00000620853 95 ntBASIC0.92□□□□□ -2.26
CDC7O00311 AL513423.1-201ENST00000621695 132 ntBASIC0.92□□□□□ -2.26
CDC7O00311 SNORD3E-202ENST00000627253 216 ntBASIC0.92□□□□□ -2.26
CDC7O00311 MIR6767-201ENST00000637302 66 ntBASIC0.92□□□□□ -2.26
CDC7O00311 Y_RNA.38-201ENST00000362617 102 ntBASIC0.91□□□□□ -2.26
CDC7O00311 RNU6-137P-201ENST00000363680 108 ntBASIC0.91□□□□□ -2.26
CDC7O00311 Y_RNA.212-201ENST00000364177 102 ntBASIC0.91□□□□□ -2.26
CDC7O00311 RNU6-159P-201ENST00000391080 106 ntBASIC0.91□□□□□ -2.26
CDC7O00311 AL034345.1-201ENST00000407768 123 ntBASIC0.91□□□□□ -2.26
CDC7O00311 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.91□□□□□ -2.26
CDC7O00311 MTATP6P13-201ENST00000438531 667 ntBASIC0.91□□□□□ -2.26
CDC7O00311 MTND4LP16-201ENST00000440828 295 ntBASIC0.91□□□□□ -2.26
CDC7O00311 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.91□□□□□ -2.26
CDC7O00311 SNORD116-28-201ENST00000516123 91 ntBASIC0.91□□□□□ -2.26
CDC7O00311 MIR3672-201ENST00000584290 82 ntBASIC0.91□□□□□ -2.26
CDC7O00311 AC124303.1-201ENST00000605703 360 ntBASIC0.91□□□□□ -2.26
CDC7O00311 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.91□□□□□ -2.26
CDC7O00311 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.91□□□□□ -2.26
CDC7O00311 AC018630.2-201ENST00000534866 2403 ntBASIC0.9□□□□□ -2.26
CDC7O00311 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 157.4 ms