Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.83□□□□□ -2.54
COL6A5A8TX70 AL109755.1-201ENST00000401791 649 ntBASIC-0.83□□□□□ -2.54
COL6A5A8TX70 AL357139.1-201ENST00000407792 426 ntBASIC-0.83□□□□□ -2.54
COL6A5A8TX70 ELOCP21-201ENST00000412558 336 ntBASIC-0.83□□□□□ -2.54
COL6A5A8TX70 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-0.83□□□□□ -2.54
COL6A5A8TX70 AC104073.1-201ENST00000451988 151 ntBASIC-0.83□□□□□ -2.54
COL6A5A8TX70 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.83□□□□□ -2.54
COL6A5A8TX70 RNU6-504P-201ENST00000516568 104 ntBASIC-0.83□□□□□ -2.54
COL6A5A8TX70 AC008752.3-201ENST00000588113 712 ntBASIC-0.83□□□□□ -2.54
COL6A5A8TX70 AC010133.1-201ENST00000615809 842 ntBASIC-0.83□□□□□ -2.54
COL6A5A8TX70 MTND1P37-201ENST00000636562 264 ntBASIC-0.83□□□□□ -2.54
COL6A5A8TX70 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC-0.83□□□□□ -2.54
COL6A5A8TX70 RNU6-490P-201ENST00000362985 107 ntBASIC-0.83□□□□□ -2.54
COL6A5A8TX70 SNORD115-10-201ENST00000365073 81 ntBASIC-0.83□□□□□ -2.54
COL6A5A8TX70 Y_RNA.520-201ENST00000384556 102 ntBASIC-0.83□□□□□ -2.54
COL6A5A8TX70 TAF13P2-201ENST00000416876 286 ntBASIC-0.83□□□□□ -2.54
COL6A5A8TX70 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC-0.83□□□□□ -2.54
COL6A5A8TX70 AC010587.1-201ENST00000505809 469 ntBASIC-0.83□□□□□ -2.54
COL6A5A8TX70 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-0.83□□□□□ -2.54
COL6A5A8TX70 AGGF1P4-201ENST00000568249 801 ntBASIC-0.83□□□□□ -2.54
COL6A5A8TX70 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-0.83□□□□□ -2.54
COL6A5A8TX70 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.83□□□□□ -2.54
COL6A5A8TX70 SNORD111-201ENST00000408139 94 ntBASIC-0.84□□□□□ -2.54
COL6A5A8TX70 MIR3152-201ENST00000579801 74 ntBASIC-0.84□□□□□ -2.54
COL6A5A8TX70 MIR4300-201ENST00000581016 96 ntBASIC-0.84□□□□□ -2.54
COL6A5A8TX70 AC107075.1-201ENST00000613695 314 ntBASIC-0.84□□□□□ -2.54
COL6A5A8TX70 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.84□□□□□ -2.54
COL6A5A8TX70 RNU4-88P-201ENST00000411220 86 ntBASIC-0.84□□□□□ -2.54
COL6A5A8TX70 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.84□□□□□ -2.54
COL6A5A8TX70 AC007919.1-201ENST00000429380 217 ntBASIC-0.84□□□□□ -2.54
COL6A5A8TX70 USP9YP22-201ENST00000438971 294 ntBASIC-0.84□□□□□ -2.54
COL6A5A8TX70 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC-0.84□□□□□ -2.54
COL6A5A8TX70 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.84□□□□□ -2.54
COL6A5A8TX70 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-0.84□□□□□ -2.54
COL6A5A8TX70 RNU6-78P-201ENST00000362897 107 ntBASIC-0.85□□□□□ -2.54
COL6A5A8TX70 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.85□□□□□ -2.54
COL6A5A8TX70 RNU6-216P-201ENST00000363282 104 ntBASIC-0.85□□□□□ -2.54
COL6A5A8TX70 SNORD115-44-201ENST00000365391 82 ntBASIC-0.85□□□□□ -2.54
COL6A5A8TX70 RNU6-57P-201ENST00000411348 103 ntBASIC-0.85□□□□□ -2.54
COL6A5A8TX70 MTND3P8-201ENST00000412909 339 ntBASIC-0.85□□□□□ -2.54
COL6A5A8TX70 FAM204CP-201ENST00000424489 642 ntBASIC-0.85□□□□□ -2.54
COL6A5A8TX70 AC073464.1-201ENST00000429823 534 ntBASIC-0.85□□□□□ -2.54
COL6A5A8TX70 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC-0.85□□□□□ -2.54
COL6A5A8TX70 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC-0.85□□□□□ -2.54
COL6A5A8TX70 DEFB131D-201ENST00000526803 184 ntBASIC-0.85□□□□□ -2.54
COL6A5A8TX70 DEFB131C-201ENST00000528817 165 ntBASIC-0.85□□□□□ -2.54
COL6A5A8TX70 AL442663.2-201ENST00000554385 511 ntBASIC-0.85□□□□□ -2.54
COL6A5A8TX70 AC078795.3-201ENST00000602913 472 ntBASIC-0.85□□□□□ -2.54
COL6A5A8TX70 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.85□□□□□ -2.55
COL6A5A8TX70 RNU6-455P-201ENST00000384681 107 ntBASIC-0.85□□□□□ -2.55
COL6A5A8TX70 MIR518B-201ENST00000385127 83 ntBASIC-0.85□□□□□ -2.55
COL6A5A8TX70 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.85□□□□□ -2.55
COL6A5A8TX70 MIR653-201ENST00000385279 96 ntBASIC-0.85□□□□□ -2.55
COL6A5A8TX70 RNU4-61P-201ENST00000411243 107 ntBASIC-0.85□□□□□ -2.55
COL6A5A8TX70 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.85□□□□□ -2.55
COL6A5A8TX70 MTND1P30-201ENST00000441241 901 ntBASIC-0.85□□□□□ -2.55
COL6A5A8TX70 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-0.85□□□□□ -2.55
COL6A5A8TX70 AC090049.2-201ENST00000550377 109 ntBASIC-0.85□□□□□ -2.55
COL6A5A8TX70 RNU6-726P-201ENST00000364680 107 ntBASIC-0.85□□□□□ -2.55
COL6A5A8TX70 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-0.85□□□□□ -2.55
COL6A5A8TX70 TMSB4XP8-201ENST00000402089 135 ntBASIC-0.85□□□□□ -2.55
COL6A5A8TX70 PPP1R11P2-201ENST00000423543 382 ntBASIC-0.85□□□□□ -2.55
COL6A5A8TX70 Y_RNA.657-201ENST00000515983 102 ntBASIC-0.85□□□□□ -2.55
COL6A5A8TX70 RNU6-977P-201ENST00000516411 103 ntBASIC-0.85□□□□□ -2.55
COL6A5A8TX70 ACA59.2-201ENST00000517061 156 ntBASIC-0.85□□□□□ -2.55
COL6A5A8TX70 RBM11P1-201ENST00000604951 799 ntBASIC-0.85□□□□□ -2.55
COL6A5A8TX70 AC005332.6-201ENST00000613178 446 ntBASIC-0.85□□□□□ -2.55
COL6A5A8TX70 MIR6818-201ENST00000621576 65 ntBASIC-0.85□□□□□ -2.55
COL6A5A8TX70 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-0.85□□□□□ -2.55
COL6A5A8TX70 Y_RNA.222-201ENST00000364264 102 ntBASIC-0.86□□□□□ -2.55
COL6A5A8TX70 Y_RNA.332-201ENST00000365271 113 ntBASIC-0.86□□□□□ -2.55
COL6A5A8TX70 AL451046.2-201ENST00000403074 277 ntBASIC-0.86□□□□□ -2.55
COL6A5A8TX70 RNU2-47P-201ENST00000410649 186 ntBASIC-0.86□□□□□ -2.55
COL6A5A8TX70 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC-0.86□□□□□ -2.55
COL6A5A8TX70 AC023512.1-201ENST00000444513 499 ntBASIC-0.86□□□□□ -2.55
COL6A5A8TX70 snoU13.2-201ENST00000459201 104 ntBASIC-0.86□□□□□ -2.55
COL6A5A8TX70 RNU7-34P-201ENST00000459394 64 ntBASIC-0.86□□□□□ -2.55
COL6A5A8TX70 AC004217.3-201ENST00000551552 878 ntBASIC-0.86□□□□□ -2.55
COL6A5A8TX70 MIR378D2-201ENST00000580636 98 ntBASIC-0.86□□□□□ -2.55
COL6A5A8TX70 MIR4677-201ENST00000584153 80 ntBASIC-0.86□□□□□ -2.55
COL6A5A8TX70 AC012433.1-201ENST00000588916 398 ntBASIC-0.86□□□□□ -2.55
COL6A5A8TX70 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-0.86□□□□□ -2.55
COL6A5A8TX70 SNORD115-26-201ENST00000365067 82 ntBASIC-0.86□□□□□ -2.55
COL6A5A8TX70 RNU6-1274P-201ENST00000384557 107 ntBASIC-0.86□□□□□ -2.55
COL6A5A8TX70 MTCO2P1-201ENST00000424648 477 ntBASIC-0.86□□□□□ -2.55
COL6A5A8TX70 MTCO3P29-201ENST00000432119 779 ntBASIC-0.86□□□□□ -2.55
COL6A5A8TX70 AL929288.2-201ENST00000446368 407 ntBASIC-0.86□□□□□ -2.55
COL6A5A8TX70 AC244505.6-201ENST00000452829 130 ntBASIC-0.86□□□□□ -2.55
COL6A5A8TX70 SNORD18.2-201ENST00000459604 70 ntBASIC-0.86□□□□□ -2.55
COL6A5A8TX70 AC104383.1-201ENST00000530297 370 ntBASIC-0.86□□□□□ -2.55
COL6A5A8TX70 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.86□□□□□ -2.55
COL6A5A8TX70 AC022893.3-201ENST00000607665 437 ntBASIC-0.86□□□□□ -2.55
COL6A5A8TX70 AC004067.1-201ENST00000608733 700 ntBASIC-0.86□□□□□ -2.55
COL6A5A8TX70 AC134878.1-201ENST00000619901 243 ntBASIC-0.86□□□□□ -2.55
COL6A5A8TX70 Y_RNA.830-201ENST00000628531 96 ntBASIC-0.86□□□□□ -2.55
COL6A5A8TX70 MIR6874-201ENST00000635894 71 ntBASIC-0.86□□□□□ -2.55
COL6A5A8TX70 RNY4P9-201ENST00000363194 97 ntBASIC-0.87□□□□□ -2.55
COL6A5A8TX70 RNU6-743P-201ENST00000364151 106 ntBASIC-0.87□□□□□ -2.55
COL6A5A8TX70 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.87□□□□□ -2.55
COL6A5A8TX70 MIRLET7B-201ENST00000385140 83 ntBASIC-0.87□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms