Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 MTND4P9-201ENST00000507819 1346 ntBASIC-1.06□□□□□ -2.58
RGPD3A6NKT7 SNORA26.3-201ENST00000391119 136 ntBASIC-1.07□□□□□ -2.58
RGPD3A6NKT7 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-1.07□□□□□ -2.58
RGPD3A6NKT7 RNU6-123P-201ENST00000516163 102 ntBASIC-1.07□□□□□ -2.58
RGPD3A6NKT7 MIR4771-2-201ENST00000577758 74 ntBASIC-1.07□□□□□ -2.58
RGPD3A6NKT7 MIR4771-1-201ENST00000582617 74 ntBASIC-1.07□□□□□ -2.58
RGPD3A6NKT7 AC008608.1-201ENST00000603910 127 ntBASIC-1.07□□□□□ -2.58
RGPD3A6NKT7 RMST_7.1-201ENST00000621935 268 ntBASIC-1.07□□□□□ -2.58
RGPD3A6NKT7 AC112487.2-201ENST00000637950 304 ntBASIC-1.07□□□□□ -2.58
RGPD3A6NKT7 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-1.08□□□□□ -2.58
RGPD3A6NKT7 RNU5E-7P-201ENST00000365290 117 ntBASIC-1.08□□□□□ -2.58
RGPD3A6NKT7 MIR1185-2-201ENST00000408687 86 ntBASIC-1.08□□□□□ -2.58
RGPD3A6NKT7 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-1.08□□□□□ -2.58
RGPD3A6NKT7 PCNPP5-201ENST00000452246 481 ntBASIC-1.08□□□□□ -2.58
RGPD3A6NKT7 RNU7-99P-201ENST00000516271 62 ntBASIC-1.08□□□□□ -2.58
RGPD3A6NKT7 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC-1.08□□□□□ -2.58
RGPD3A6NKT7 AC010525.2-201ENST00000590920 195 ntBASIC-1.08□□□□□ -2.58
RGPD3A6NKT7 AL590491.3-201ENST00000610731 82 ntBASIC-1.08□□□□□ -2.58
RGPD3A6NKT7 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-1.08□□□□□ -2.58
RGPD3A6NKT7 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-1.08□□□□□ -2.58
RGPD3A6NKT7 MIR549A-201ENST00000385268 96 ntBASIC-1.08□□□□□ -2.58
RGPD3A6NKT7 RNU6-447P-201ENST00000410293 104 ntBASIC-1.08□□□□□ -2.58
RGPD3A6NKT7 RNU6-1118P-201ENST00000410382 104 ntBASIC-1.08□□□□□ -2.58
RGPD3A6NKT7 RNU6-1076P-201ENST00000410397 104 ntBASIC-1.08□□□□□ -2.58
RGPD3A6NKT7 RNU6-355P-201ENST00000410427 104 ntBASIC-1.08□□□□□ -2.58
RGPD3A6NKT7 RNU6-791P-201ENST00000410467 104 ntBASIC-1.08□□□□□ -2.58
RGPD3A6NKT7 RNU6-705P-201ENST00000410601 104 ntBASIC-1.08□□□□□ -2.58
RGPD3A6NKT7 RNU6-1100P-201ENST00000410691 104 ntBASIC-1.08□□□□□ -2.58
RGPD3A6NKT7 RNU6-860P-201ENST00000410860 104 ntBASIC-1.08□□□□□ -2.58
RGPD3A6NKT7 RNU6-1217P-201ENST00000411276 104 ntBASIC-1.08□□□□□ -2.58
RGPD3A6NKT7 RNU6-785P-201ENST00000411324 104 ntBASIC-1.08□□□□□ -2.58
RGPD3A6NKT7 MCFD2P1-201ENST00000417812 300 ntBASIC-1.08□□□□□ -2.58
RGPD3A6NKT7 AC005002.2-201ENST00000438228 269 ntBASIC-1.08□□□□□ -2.58
RGPD3A6NKT7 RNU7-140P-201ENST00000459546 60 ntBASIC-1.08□□□□□ -2.58
RGPD3A6NKT7 AC010486.3-201ENST00000511602 785 ntBASIC-1.08□□□□□ -2.58
RGPD3A6NKT7 RNU6-914P-201ENST00000516749 109 ntBASIC-1.08□□□□□ -2.58
RGPD3A6NKT7 RPL21P9-201ENST00000556149 474 ntBASIC-1.08□□□□□ -2.58
RGPD3A6NKT7 AC090617.3-201ENST00000573670 475 ntBASIC-1.08□□□□□ -2.58
RGPD3A6NKT7 AL355375.2-201ENST00000574825 175 ntBASIC-1.08□□□□□ -2.58
RGPD3A6NKT7 AC009994.1-201ENST00000606889 253 ntBASIC-1.08□□□□□ -2.58
RGPD3A6NKT7 U6.90-201ENST00000614007 104 ntBASIC-1.08□□□□□ -2.58
RGPD3A6NKT7 U6.70-201ENST00000620287 104 ntBASIC-1.08□□□□□ -2.58
RGPD3A6NKT7 MIR6514-201ENST00000622549 70 ntBASIC-1.08□□□□□ -2.58
RGPD3A6NKT7 AL157770.1-201ENST00000623049 439 ntBASIC-1.08□□□□□ -2.58
RGPD3A6NKT7 AC027279.3-201ENST00000625055 122 ntBASIC-1.08□□□□□ -2.58
RGPD3A6NKT7 Y_RNA.477-201ENST00000384352 108 ntBASIC-1.09□□□□□ -2.58
RGPD3A6NKT7 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.09□□□□□ -2.58
RGPD3A6NKT7 MIR10A-201ENST00000385043 110 ntBASIC-1.09□□□□□ -2.58
RGPD3A6NKT7 MIR136-201ENST00000385207 82 ntBASIC-1.09□□□□□ -2.58
RGPD3A6NKT7 USP9YP28-201ENST00000435142 589 ntBASIC-1.09□□□□□ -2.58
RGPD3A6NKT7 AC079354.2-201ENST00000453523 154 ntBASIC-1.09□□□□□ -2.58
RGPD3A6NKT7 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-1.09□□□□□ -2.58
RGPD3A6NKT7 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-1.09□□□□□ -2.58
RGPD3A6NKT7 SNORD92-201ENST00000585078 85 ntBASIC-1.09□□□□□ -2.58
RGPD3A6NKT7 AL359547.2-201ENST00000615810 418 ntBASIC-1.09□□□□□ -2.58
RGPD3A6NKT7 RNU6-1122P-201ENST00000384449 107 ntBASIC-1.1□□□□□ -2.59
RGPD3A6NKT7 MIR501-201ENST00000390204 84 ntBASIC-1.1□□□□□ -2.59
RGPD3A6NKT7 CALM2P4-201ENST00000430810 426 ntBASIC-1.1□□□□□ -2.59
RGPD3A6NKT7 MTND1P4-201ENST00000435196 415 ntBASIC-1.1□□□□□ -2.59
RGPD3A6NKT7 USP9YP29-201ENST00000445112 563 ntBASIC-1.1□□□□□ -2.59
RGPD3A6NKT7 RNU7-57P-201ENST00000459540 60 ntBASIC-1.1□□□□□ -2.59
RGPD3A6NKT7 RNU6-64P-201ENST00000517119 105 ntBASIC-1.1□□□□□ -2.59
RGPD3A6NKT7 MIR4324-201ENST00000584846 72 ntBASIC-1.1□□□□□ -2.59
RGPD3A6NKT7 AL158042.1-201ENST00000605338 460 ntBASIC-1.1□□□□□ -2.59
RGPD3A6NKT7 AC104458.1-201ENST00000608243 463 ntBASIC-1.1□□□□□ -2.59
RGPD3A6NKT7 AC134878.1-201ENST00000619901 243 ntBASIC-1.1□□□□□ -2.59
RGPD3A6NKT7 AC068792.1-201ENST00000621354 417 ntBASIC-1.1□□□□□ -2.59
RGPD3A6NKT7 RNU6-353P-201ENST00000364266 108 ntBASIC-1.11□□□□□ -2.59
RGPD3A6NKT7 MIR1207-201ENST00000408249 87 ntBASIC-1.11□□□□□ -2.59
RGPD3A6NKT7 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-1.11□□□□□ -2.59
RGPD3A6NKT7 MTND1P26-201ENST00000440488 538 ntBASIC-1.11□□□□□ -2.59
RGPD3A6NKT7 AC079781.2-201ENST00000446424 169 ntBASIC-1.11□□□□□ -2.59
RGPD3A6NKT7 SCARNA18-201ENST00000459004 134 ntBASIC-1.11□□□□□ -2.59
RGPD3A6NKT7 AC116562.3-201ENST00000506136 177 ntBASIC-1.11□□□□□ -2.59
RGPD3A6NKT7 RNU6-469P-201ENST00000516253 101 ntBASIC-1.11□□□□□ -2.59
RGPD3A6NKT7 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-1.11□□□□□ -2.59
RGPD3A6NKT7 U6.73-201ENST00000619194 103 ntBASIC-1.11□□□□□ -2.59
RGPD3A6NKT7 AC091304.10-201ENST00000641554 121 ntBASIC-1.11□□□□□ -2.59
RGPD3A6NKT7 RNU6-480P-201ENST00000384332 107 ntBASIC-1.11□□□□□ -2.59
RGPD3A6NKT7 RNA5SP482-201ENST00000391269 118 ntBASIC-1.11□□□□□ -2.59
RGPD3A6NKT7 MTCO2P33-201ENST00000402100 465 ntBASIC-1.11□□□□□ -2.59
RGPD3A6NKT7 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-1.11□□□□□ -2.59
RGPD3A6NKT7 AC091951.3-201ENST00000504093 246 ntBASIC-1.11□□□□□ -2.59
RGPD3A6NKT7 TCL6_2.1-201ENST00000615162 119 ntBASIC-1.11□□□□□ -2.59
RGPD3A6NKT7 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-1.11□□□□□ -2.59
RGPD3A6NKT7 AC138649.3-201ENST00000622154 254 ntBASIC-1.11□□□□□ -2.59
RGPD3A6NKT7 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.12□□□□□ -2.59
RGPD3A6NKT7 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.12□□□□□ -2.59
RGPD3A6NKT7 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-1.12□□□□□ -2.59
RGPD3A6NKT7 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-1.12□□□□□ -2.59
RGPD3A6NKT7 AL355994.1-201ENST00000424379 260 ntBASIC-1.12□□□□□ -2.59
RGPD3A6NKT7 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-1.12□□□□□ -2.59
RGPD3A6NKT7 ZNF736P5Y-201ENST00000451173 805 ntBASIC-1.12□□□□□ -2.59
RGPD3A6NKT7 AC079395.1-201ENST00000510981 262 ntBASIC-1.12□□□□□ -2.59
RGPD3A6NKT7 AC090572.1-201ENST00000519251 160 ntBASIC-1.12□□□□□ -2.59
RGPD3A6NKT7 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC-1.12□□□□□ -2.59
RGPD3A6NKT7 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-1.12□□□□□ -2.59
RGPD3A6NKT7 Z99497.2-201ENST00000603634 310 ntBASIC-1.12□□□□□ -2.59
RGPD3A6NKT7 AL139286.2-201ENST00000606838 396 ntBASIC-1.12□□□□□ -2.59
RGPD3A6NKT7 SCARNA4-201ENST00000629045 128 ntBASIC-1.12□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms