Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 AL357139.1-201ENST00000407792 426 ntBASIC2.95□□□□□ -1.94
PTPDC1A2A3K4 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.95□□□□□ -1.94
PTPDC1A2A3K4 Z96811.1-201ENST00000445880 108 ntBASIC2.95□□□□□ -1.94
PTPDC1A2A3K4 HMGN2P18-201ENST00000450680 270 ntBASIC2.95□□□□□ -1.94
PTPDC1A2A3K4 AC016925.1-201ENST00000458303 298 ntBASIC2.95□□□□□ -1.94
PTPDC1A2A3K4 RNU7-57P-201ENST00000459540 60 ntBASIC2.95□□□□□ -1.94
PTPDC1A2A3K4 RNU6-436P-201ENST00000516171 114 ntBASIC2.95□□□□□ -1.94
PTPDC1A2A3K4 RNA5SP320-201ENST00000516263 124 ntBASIC2.95□□□□□ -1.94
PTPDC1A2A3K4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.95□□□□□ -1.94
PTPDC1A2A3K4 RPL21P9-201ENST00000556149 474 ntBASIC2.95□□□□□ -1.94
PTPDC1A2A3K4 MIR4643-201ENST00000577473 78 ntBASIC2.95□□□□□ -1.94
PTPDC1A2A3K4 MIR3945-201ENST00000581853 98 ntBASIC2.95□□□□□ -1.94
PTPDC1A2A3K4 AL512605.2-201ENST00000592972 256 ntBASIC2.95□□□□□ -1.94
PTPDC1A2A3K4 AC009779.6-201ENST00000603972 165 ntBASIC2.95□□□□□ -1.94
PTPDC1A2A3K4 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.95□□□□□ -1.94
PTPDC1A2A3K4 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
PTPDC1A2A3K4 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.95□□□□□ -1.94
PTPDC1A2A3K4 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.94□□□□□ -1.94
PTPDC1A2A3K4 RNU6-324P-201ENST00000363957 106 ntBASIC2.94□□□□□ -1.94
PTPDC1A2A3K4 SNORD115-30-201ENST00000364117 82 ntBASIC2.94□□□□□ -1.94
PTPDC1A2A3K4 Y_RNA.329-201ENST00000365209 107 ntBASIC2.94□□□□□ -1.94
PTPDC1A2A3K4 RNU6-975P-201ENST00000384296 105 ntBASIC2.94□□□□□ -1.94
PTPDC1A2A3K4 AL139095.1-201ENST00000404326 391 ntBASIC2.94□□□□□ -1.94
PTPDC1A2A3K4 AL445687.1-201ENST00000439946 251 ntBASIC2.94□□□□□ -1.94
PTPDC1A2A3K4 UBBP3-201ENST00000445497 241 ntBASIC2.94□□□□□ -1.94
PTPDC1A2A3K4 AC008413.1-201ENST00000511864 177 ntBASIC2.94□□□□□ -1.94
PTPDC1A2A3K4 RNA5SP490-201ENST00000517141 136 ntBASIC2.94□□□□□ -1.94
PTPDC1A2A3K4 MIR3684-201ENST00000579779 74 ntBASIC2.94□□□□□ -1.94
PTPDC1A2A3K4 MIR3145-201ENST00000580727 82 ntBASIC2.94□□□□□ -1.94
PTPDC1A2A3K4 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.94□□□□□ -1.94
PTPDC1A2A3K4 AL162424.1-201ENST00000602325 221 ntBASIC2.94□□□□□ -1.94
PTPDC1A2A3K4 DEFB117-201ENST00000602356 141 ntBASIC2.94□□□□□ -1.94
PTPDC1A2A3K4 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
PTPDC1A2A3K4 U6.115-201ENST00000636045 103 ntBASIC2.94□□□□□ -1.94
PTPDC1A2A3K4 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.94□□□□□ -1.94
PTPDC1A2A3K4 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.94□□□□□ -1.94
PTPDC1A2A3K4 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
PTPDC1A2A3K4 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
PTPDC1A2A3K4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.93□□□□□ -1.94
PTPDC1A2A3K4 AC009487.4-201ENST00000624969 3585 ntBASIC2.93□□□□□ -1.94
PTPDC1A2A3K4 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
PTPDC1A2A3K4 RNU4-80P-201ENST00000363200 141 ntBASIC2.93□□□□□ -1.94
PTPDC1A2A3K4 Y_RNA.269-201ENST00000364685 89 ntBASIC2.93□□□□□ -1.94
PTPDC1A2A3K4 RNU6-740P-201ENST00000364734 105 ntBASIC2.93□□□□□ -1.94
PTPDC1A2A3K4 DEFA7P-201ENST00000382676 285 ntBASIC2.93□□□□□ -1.94
PTPDC1A2A3K4 RNU6-1248P-201ENST00000391096 64 ntBASIC2.93□□□□□ -1.94
PTPDC1A2A3K4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.93□□□□□ -1.94
PTPDC1A2A3K4 RNU6-191P-201ENST00000516295 94 ntBASIC2.93□□□□□ -1.94
PTPDC1A2A3K4 AC091544.4-201ENST00000555268 342 ntBASIC2.93□□□□□ -1.94
PTPDC1A2A3K4 AC090616.3-201ENST00000582184 217 ntBASIC2.93□□□□□ -1.94
PTPDC1A2A3K4 AL449363.1-201ENST00000617815 186 ntBASIC2.93□□□□□ -1.94
PTPDC1A2A3K4 snoZ196.1-201ENST00000625269 89 ntBASIC2.93□□□□□ -1.94
PTPDC1A2A3K4 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PTPDC1A2A3K4 SNORA25.6-201ENST00000364121 118 ntBASIC2.92□□□□□ -1.94
PTPDC1A2A3K4 SNORD56.5-201ENST00000364281 72 ntBASIC2.92□□□□□ -1.94
PTPDC1A2A3K4 RNA5SP125-201ENST00000364843 120 ntBASIC2.92□□□□□ -1.94
PTPDC1A2A3K4 MIR27B-201ENST00000385129 97 ntBASIC2.92□□□□□ -1.94
PTPDC1A2A3K4 AL031003.1-201ENST00000404229 172 ntBASIC2.92□□□□□ -1.94
PTPDC1A2A3K4 RNU2-48P-201ENST00000410694 191 ntBASIC2.92□□□□□ -1.94
PTPDC1A2A3K4 RNU2-14P-201ENST00000411053 191 ntBASIC2.92□□□□□ -1.94
PTPDC1A2A3K4 AC024067.1-201ENST00000426199 223 ntBASIC2.92□□□□□ -1.94
PTPDC1A2A3K4 Z98949.2-201ENST00000440996 144 ntBASIC2.92□□□□□ -1.94
PTPDC1A2A3K4 SUMO1P2-201ENST00000452524 304 ntBASIC2.92□□□□□ -1.94
PTPDC1A2A3K4 TRBV12-1-201ENST00000479785 344 ntBASIC2.92□□□□□ -1.94
PTPDC1A2A3K4 RNU6-948P-201ENST00000516374 107 ntBASIC2.92□□□□□ -1.94
PTPDC1A2A3K4 RNU6-826P-201ENST00000516827 104 ntBASIC2.92□□□□□ -1.94
PTPDC1A2A3K4 AC004486.1-201ENST00000546846 233 ntBASIC2.92□□□□□ -1.94
PTPDC1A2A3K4 MIR3670-2-201ENST00000582974 65 ntBASIC2.92□□□□□ -1.94
PTPDC1A2A3K4 MIR3670-1-201ENST00000584160 65 ntBASIC2.92□□□□□ -1.94
PTPDC1A2A3K4 MIR3670-3-201ENST00000584855 65 ntBASIC2.92□□□□□ -1.94
PTPDC1A2A3K4 MIR3670-4-201ENST00000612260 65 ntBASIC2.92□□□□□ -1.94
PTPDC1A2A3K4 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
PTPDC1A2A3K4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PTPDC1A2A3K4 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PTPDC1A2A3K4 VTRNA1-1-201ENST00000363120 99 ntBASIC2.91□□□□□ -1.94
PTPDC1A2A3K4 RNU6-200P-201ENST00000364743 107 ntBASIC2.91□□□□□ -1.94
PTPDC1A2A3K4 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.91□□□□□ -1.94
PTPDC1A2A3K4 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.91□□□□□ -1.94
PTPDC1A2A3K4 AC005828.6-201ENST00000606610 232 ntBASIC2.91□□□□□ -1.94
PTPDC1A2A3K4 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.91□□□□□ -1.94
PTPDC1A2A3K4 U4.3-201ENST00000621047 82 ntBASIC2.91□□□□□ -1.94
PTPDC1A2A3K4 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
PTPDC1A2A3K4 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PTPDC1A2A3K4 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
PTPDC1A2A3K4 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.9□□□□□ -1.94
PTPDC1A2A3K4 Y_RNA.82-201ENST00000363000 102 ntBASIC2.9□□□□□ -1.95
PTPDC1A2A3K4 Y_RNA.92-201ENST00000363043 102 ntBASIC2.9□□□□□ -1.95
PTPDC1A2A3K4 RNU6-743P-201ENST00000364151 106 ntBASIC2.9□□□□□ -1.95
PTPDC1A2A3K4 Y_RNA.235-201ENST00000364412 102 ntBASIC2.9□□□□□ -1.95
PTPDC1A2A3K4 Y_RNA.306-201ENST00000365015 102 ntBASIC2.9□□□□□ -1.95
PTPDC1A2A3K4 Y_RNA.312-201ENST00000365089 102 ntBASIC2.9□□□□□ -1.95
PTPDC1A2A3K4 Y_RNA.322-201ENST00000365151 102 ntBASIC2.9□□□□□ -1.95
PTPDC1A2A3K4 SNORA67.4-201ENST00000384688 142 ntBASIC2.9□□□□□ -1.95
PTPDC1A2A3K4 AC092427.1-202ENST00000430569 476 ntBASIC2.9□□□□□ -1.95
PTPDC1A2A3K4 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.9□□□□□ -1.95
PTPDC1A2A3K4 RPS12P2-201ENST00000439728 269 ntBASIC2.9□□□□□ -1.95
PTPDC1A2A3K4 AL137159.1-201ENST00000452808 512 ntBASIC2.9□□□□□ -1.95
PTPDC1A2A3K4 Y_RNA.650-201ENST00000459002 102 ntBASIC2.9□□□□□ -1.95
PTPDC1A2A3K4 RNU6-221P-201ENST00000459541 99 ntBASIC2.9□□□□□ -1.95
PTPDC1A2A3K4 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 209 ms