Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 AC009310.1-201ENST00000414414 451 ntBASIC1.09□□□□□ -2.23
TRAV40A0A0B4J280 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.09□□□□□ -2.23
TRAV40A0A0B4J280 AC007098.1-201ENST00000420122 367 ntBASIC1.09□□□□□ -2.23
TRAV40A0A0B4J280 USMG5P1-201ENST00000425964 177 ntBASIC1.09□□□□□ -2.23
TRAV40A0A0B4J280 EIF1P2-201ENST00000428233 350 ntBASIC1.09□□□□□ -2.23
TRAV40A0A0B4J280 AC092423.1-201ENST00000430165 186 ntBASIC1.09□□□□□ -2.23
TRAV40A0A0B4J280 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.09□□□□□ -2.23
TRAV40A0A0B4J280 RPL23AP6-201ENST00000446637 472 ntBASIC1.09□□□□□ -2.23
TRAV40A0A0B4J280 RPL30P15-201ENST00000457129 321 ntBASIC1.09□□□□□ -2.23
TRAV40A0A0B4J280 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.09□□□□□ -2.23
TRAV40A0A0B4J280 RNU6-875P-201ENST00000516488 106 ntBASIC1.09□□□□□ -2.23
TRAV40A0A0B4J280 RNU6-344P-201ENST00000516635 111 ntBASIC1.09□□□□□ -2.23
TRAV40A0A0B4J280 AC025647.1-201ENST00000517879 253 ntBASIC1.09□□□□□ -2.23
TRAV40A0A0B4J280 AC134698.4-201ENST00000523451 826 ntBASIC1.09□□□□□ -2.23
TRAV40A0A0B4J280 AC084364.2-201ENST00000546924 395 ntBASIC1.09□□□□□ -2.23
TRAV40A0A0B4J280 AC093023.1-201ENST00000547375 507 ntBASIC1.09□□□□□ -2.23
TRAV40A0A0B4J280 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.09□□□□□ -2.23
TRAV40A0A0B4J280 AL121579.1-201ENST00000555129 305 ntBASIC1.09□□□□□ -2.23
TRAV40A0A0B4J280 AC005786.1-201ENST00000588553 154 ntBASIC1.09□□□□□ -2.23
TRAV40A0A0B4J280 AC010900.2-201ENST00000604508 210 ntBASIC1.09□□□□□ -2.23
TRAV40A0A0B4J280 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.09□□□□□ -2.23
TRAV40A0A0B4J280 AC005296.1-201ENST00000616145 209 ntBASIC1.09□□□□□ -2.23
TRAV40A0A0B4J280 AC087588.2-201ENST00000617667 426 ntBASIC1.09□□□□□ -2.23
TRAV40A0A0B4J280 AL078596.1-201ENST00000624856 447 ntBASIC1.09□□□□□ -2.23
TRAV40A0A0B4J280 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.08□□□□□ -2.24
TRAV40A0A0B4J280 RNU1-96P-201ENST00000364163 162 ntBASIC1.08□□□□□ -2.24
TRAV40A0A0B4J280 Y_RNA.226-201ENST00000364337 114 ntBASIC1.08□□□□□ -2.24
TRAV40A0A0B4J280 RNU6-708P-201ENST00000384217 107 ntBASIC1.08□□□□□ -2.24
TRAV40A0A0B4J280 Y_RNA.529-201ENST00000384586 119 ntBASIC1.08□□□□□ -2.24
TRAV40A0A0B4J280 MIR329-1-201ENST00000385028 80 ntBASIC1.08□□□□□ -2.24
TRAV40A0A0B4J280 ELOCP21-201ENST00000412558 336 ntBASIC1.08□□□□□ -2.24
TRAV40A0A0B4J280 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.08□□□□□ -2.24
TRAV40A0A0B4J280 AC096644.2-201ENST00000429278 159 ntBASIC1.08□□□□□ -2.24
TRAV40A0A0B4J280 CHEK2P4-201ENST00000450340 246 ntBASIC1.08□□□□□ -2.24
TRAV40A0A0B4J280 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.08□□□□□ -2.24
TRAV40A0A0B4J280 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.08□□□□□ -2.24
TRAV40A0A0B4J280 AC004223.1-201ENST00000479840 271 ntBASIC1.08□□□□□ -2.24
TRAV40A0A0B4J280 RPL36AP21-201ENST00000490372 323 ntBASIC1.08□□□□□ -2.24
TRAV40A0A0B4J280 RNU6-559P-201ENST00000516151 98 ntBASIC1.08□□□□□ -2.24
TRAV40A0A0B4J280 Y_RNA.706-201ENST00000516933 99 ntBASIC1.08□□□□□ -2.24
TRAV40A0A0B4J280 RNA5SP54-201ENST00000516951 92 ntBASIC1.08□□□□□ -2.24
TRAV40A0A0B4J280 SUMO2P18-201ENST00000518873 252 ntBASIC1.08□□□□□ -2.24
TRAV40A0A0B4J280 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.08□□□□□ -2.24
TRAV40A0A0B4J280 AC027419.1-201ENST00000522976 328 ntBASIC1.08□□□□□ -2.24
TRAV40A0A0B4J280 MIR4801-201ENST00000582704 82 ntBASIC1.08□□□□□ -2.24
TRAV40A0A0B4J280 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.08□□□□□ -2.24
TRAV40A0A0B4J280 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.08□□□□□ -2.24
TRAV40A0A0B4J280 SNORD11B-201ENST00000607707 90 ntBASIC1.08□□□□□ -2.24
TRAV40A0A0B4J280 AL132765.2-201ENST00000610812 351 ntBASIC1.08□□□□□ -2.24
TRAV40A0A0B4J280 AC092794.2-201ENST00000620933 563 ntBASIC1.08□□□□□ -2.24
TRAV40A0A0B4J280 AC091895.1-201ENST00000624494 256 ntBASIC1.08□□□□□ -2.24
TRAV40A0A0B4J280 U6.108-201ENST00000637764 58 ntBASIC1.08□□□□□ -2.24
TRAV40A0A0B4J280 AC112487.2-201ENST00000637950 304 ntBASIC1.08□□□□□ -2.24
TRAV40A0A0B4J280 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.08□□□□□ -2.24
TRAV40A0A0B4J280 MTND5P35-201ENST00000557537 1720 ntBASIC1.08□□□□□ -2.24
TRAV40A0A0B4J280 Y_RNA.70-201ENST00000362886 110 ntBASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 Y_RNA.179-201ENST00000363844 90 ntBASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 RNU6-593P-201ENST00000364716 112 ntBASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 SNORA25.9-201ENST00000365087 128 ntBASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 RNU6-793P-201ENST00000384233 104 ntBASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 RNU6-1235P-201ENST00000384559 107 ntBASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 RNA5SP212-201ENST00000391223 107 ntBASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 RNU1-139P-201ENST00000391307 165 ntBASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 USP9YP16-201ENST00000430287 407 ntBASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 RPL23AP50-201ENST00000434149 455 ntBASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 USP9YP23-201ENST00000455085 407 ntBASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 Y_RNA.635-201ENST00000459041 101 ntBASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 RNU7-169P-201ENST00000459456 61 ntBASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 RNU6-498P-201ENST00000459468 107 ntBASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 AC022493.2-201ENST00000506122 481 ntBASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 AL117351.2-201ENST00000513571 157 ntBASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 RNU6-1114P-201ENST00000516022 107 ntBASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 RNU6-948P-201ENST00000516374 107 ntBASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 AC022868.1-201ENST00000517767 391 ntBASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 AC055872.1-201ENST00000570978 278 ntBASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 UBE2V2P2-201ENST00000587677 504 ntBASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 RPL17P51-201ENST00000605218 238 ntBASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 AC100812.1-201ENST00000607622 580 ntBASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 AC010999.1-201ENST00000611856 324 ntBASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 PISRT1.1-201ENST00000616930 107 ntBASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 snoZ196.1-201ENST00000625269 89 ntBASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 MIR1302-1-201ENST00000637932 143 ntBASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
TRAV40A0A0B4J280 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
TRAV40A0A0B4J280 snoU2-30.2-201ENST00000362805 70 ntBASIC1.06□□□□□ -2.24
TRAV40A0A0B4J280 Y_RNA.67-201ENST00000362870 100 ntBASIC1.06□□□□□ -2.24
TRAV40A0A0B4J280 RNU6-879P-201ENST00000364328 108 ntBASIC1.06□□□□□ -2.24
TRAV40A0A0B4J280 Y_RNA.364-201ENST00000365532 101 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms