Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 AC105417.1-201ENST00000514691 285 ntBASIC-0.11□□□□□ -2.43
TRAV4A0A0B4J268 RNU4-77P-201ENST00000516692 156 ntBASIC-0.11□□□□□ -2.43
TRAV4A0A0B4J268 RNA5SP54-201ENST00000516951 92 ntBASIC-0.11□□□□□ -2.43
TRAV4A0A0B4J268 MTND1P5-201ENST00000517906 940 ntBASIC-0.11□□□□□ -2.43
TRAV4A0A0B4J268 AC069113.3-201ENST00000521019 150 ntBASIC-0.11□□□□□ -2.43
TRAV4A0A0B4J268 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.11□□□□□ -2.43
TRAV4A0A0B4J268 AC104383.1-201ENST00000530297 370 ntBASIC-0.11□□□□□ -2.43
TRAV4A0A0B4J268 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC-0.11□□□□□ -2.43
TRAV4A0A0B4J268 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.11□□□□□ -2.43
TRAV4A0A0B4J268 AC023157.2-201ENST00000540596 141 ntBASIC-0.11□□□□□ -2.43
TRAV4A0A0B4J268 AC011712.1-201ENST00000588959 234 ntBASIC-0.11□□□□□ -2.43
TRAV4A0A0B4J268 AC091925.1-201ENST00000623204 462 ntBASIC-0.11□□□□□ -2.43
TRAV4A0A0B4J268 MIR330-201ENST00000362196 94 ntBASIC-0.12□□□□□ -2.43
TRAV4A0A0B4J268 SNORA1B-201ENST00000362535 133 ntBASIC-0.12□□□□□ -2.43
TRAV4A0A0B4J268 Y_RNA.123-201ENST00000363338 102 ntBASIC-0.12□□□□□ -2.43
TRAV4A0A0B4J268 RNU6-108P-201ENST00000365558 107 ntBASIC-0.12□□□□□ -2.43
TRAV4A0A0B4J268 MIR193B-201ENST00000384907 83 ntBASIC-0.12□□□□□ -2.43
TRAV4A0A0B4J268 SNORA40.8-201ENST00000411034 126 ntBASIC-0.12□□□□□ -2.43
TRAV4A0A0B4J268 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.12□□□□□ -2.43
TRAV4A0A0B4J268 MTCO3P19-201ENST00000415864 321 ntBASIC-0.12□□□□□ -2.43
TRAV4A0A0B4J268 AC073261.1-201ENST00000429409 121 ntBASIC-0.12□□□□□ -2.43
TRAV4A0A0B4J268 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.12□□□□□ -2.43
TRAV4A0A0B4J268 U8.21-201ENST00000459536 136 ntBASIC-0.12□□□□□ -2.43
TRAV4A0A0B4J268 HMGN2P26-201ENST00000463169 339 ntBASIC-0.12□□□□□ -2.43
TRAV4A0A0B4J268 AC091951.3-201ENST00000504093 246 ntBASIC-0.12□□□□□ -2.43
TRAV4A0A0B4J268 AC005178.1-201ENST00000508392 440 ntBASIC-0.12□□□□□ -2.43
TRAV4A0A0B4J268 RNA5SP227-201ENST00000516184 113 ntBASIC-0.12□□□□□ -2.43
TRAV4A0A0B4J268 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.12□□□□□ -2.43
TRAV4A0A0B4J268 RNA5SP48-201ENST00000363969 126 ntBASIC-0.13□□□□□ -2.43
TRAV4A0A0B4J268 MIR452-201ENST00000385020 85 ntBASIC-0.13□□□□□ -2.43
TRAV4A0A0B4J268 SNORD73A-201ENST00000386062 65 ntBASIC-0.13□□□□□ -2.43
TRAV4A0A0B4J268 Y_RNA.598-201ENST00000410480 95 ntBASIC-0.13□□□□□ -2.43
TRAV4A0A0B4J268 ZNF885P-201ENST00000420174 1098 ntBASIC-0.13□□□□□ -2.43
TRAV4A0A0B4J268 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-0.13□□□□□ -2.43
TRAV4A0A0B4J268 RNU7-138P-201ENST00000459479 64 ntBASIC-0.13□□□□□ -2.43
TRAV4A0A0B4J268 AC091021.1-201ENST00000468051 388 ntBASIC-0.13□□□□□ -2.43
TRAV4A0A0B4J268 AF186996.7-201ENST00000492781 209 ntBASIC-0.13□□□□□ -2.43
TRAV4A0A0B4J268 RNU7-41P-201ENST00000515917 61 ntBASIC-0.13□□□□□ -2.43
TRAV4A0A0B4J268 RNU7-172P-201ENST00000517125 64 ntBASIC-0.13□□□□□ -2.43
TRAV4A0A0B4J268 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC-0.13□□□□□ -2.43
TRAV4A0A0B4J268 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.13□□□□□ -2.43
TRAV4A0A0B4J268 MIR4509-3-201ENST00000578671 94 ntBASIC-0.13□□□□□ -2.43
TRAV4A0A0B4J268 MIR4509-2-201ENST00000583920 94 ntBASIC-0.13□□□□□ -2.43
TRAV4A0A0B4J268 AC007684.1-201ENST00000609671 477 ntBASIC-0.13□□□□□ -2.43
TRAV4A0A0B4J268 U2.17-201ENST00000611454 95 ntBASIC-0.13□□□□□ -2.43
TRAV4A0A0B4J268 MIR4509-1-201ENST00000618224 94 ntBASIC-0.13□□□□□ -2.43
TRAV4A0A0B4J268 AL008636.1-201ENST00000625038 1018 ntBASIC-0.13□□□□□ -2.43
TRAV4A0A0B4J268 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.14□□□□□ -2.43
TRAV4A0A0B4J268 RNA5SP214-201ENST00000363378 118 ntBASIC-0.14□□□□□ -2.43
TRAV4A0A0B4J268 SNORA42.1-201ENST00000363515 137 ntBASIC-0.14□□□□□ -2.43
TRAV4A0A0B4J268 SNORD114-9-201ENST00000364370 72 ntBASIC-0.14□□□□□ -2.43
TRAV4A0A0B4J268 SNORD87-201ENST00000364849 89 ntBASIC-0.14□□□□□ -2.43
TRAV4A0A0B4J268 SNORA2B-201ENST00000384583 137 ntBASIC-0.14□□□□□ -2.43
TRAV4A0A0B4J268 RNU6-906P-201ENST00000384700 70 ntBASIC-0.14□□□□□ -2.43
TRAV4A0A0B4J268 MIR1-2-201ENST00000384961 85 ntBASIC-0.14□□□□□ -2.43
TRAV4A0A0B4J268 RNA5SP63-201ENST00000391225 112 ntBASIC-0.14□□□□□ -2.43
TRAV4A0A0B4J268 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.14□□□□□ -2.43
TRAV4A0A0B4J268 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.14□□□□□ -2.43
TRAV4A0A0B4J268 AC097462.1-201ENST00000514125 324 ntBASIC-0.14□□□□□ -2.43
TRAV4A0A0B4J268 SNORA74.3-201ENST00000517108 154 ntBASIC-0.14□□□□□ -2.43
TRAV4A0A0B4J268 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.14□□□□□ -2.43
TRAV4A0A0B4J268 MTND1P35-201ENST00000526739 508 ntBASIC-0.14□□□□□ -2.43
TRAV4A0A0B4J268 AC093027.1-201ENST00000546698 429 ntBASIC-0.14□□□□□ -2.43
TRAV4A0A0B4J268 AC091178.2-201ENST00000584401 117 ntBASIC-0.14□□□□□ -2.43
TRAV4A0A0B4J268 AC078938.1-201ENST00000620993 318 ntBASIC-0.14□□□□□ -2.43
TRAV4A0A0B4J268 AC027279.3-201ENST00000625055 122 ntBASIC-0.14□□□□□ -2.43
TRAV4A0A0B4J268 MIR371B-201ENST00000638082 66 ntBASIC-0.14□□□□□ -2.43
TRAV4A0A0B4J268 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC-0.14□□□□□ -2.43
TRAV4A0A0B4J268 RNU6-815P-201ENST00000384080 113 ntBASIC-0.15□□□□□ -2.43
TRAV4A0A0B4J268 MIR520F-201ENST00000384824 87 ntBASIC-0.15□□□□□ -2.43
TRAV4A0A0B4J268 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-0.15□□□□□ -2.43
TRAV4A0A0B4J268 AC010598.1-201ENST00000510378 103 ntBASIC-0.15□□□□□ -2.43
TRAV4A0A0B4J268 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.15□□□□□ -2.43
TRAV4A0A0B4J268 MIR3682-201ENST00000581338 84 ntBASIC-0.15□□□□□ -2.43
TRAV4A0A0B4J268 AC006566.1-201ENST00000608943 513 ntBASIC-0.15□□□□□ -2.43
TRAV4A0A0B4J268 AC010999.1-201ENST00000611856 324 ntBASIC-0.15□□□□□ -2.43
TRAV4A0A0B4J268 MIR520G-201ENST00000385064 90 ntBASIC-0.16□□□□□ -2.44
TRAV4A0A0B4J268 MIR520H-201ENST00000385126 88 ntBASIC-0.16□□□□□ -2.44
TRAV4A0A0B4J268 RNU6-679P-201ENST00000391003 106 ntBASIC-0.16□□□□□ -2.44
TRAV4A0A0B4J268 Z98949.2-201ENST00000440996 144 ntBASIC-0.16□□□□□ -2.44
TRAV4A0A0B4J268 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.16□□□□□ -2.44
TRAV4A0A0B4J268 AC093534.1-201ENST00000504977 132 ntBASIC-0.16□□□□□ -2.44
TRAV4A0A0B4J268 RNU6-863P-201ENST00000515989 104 ntBASIC-0.16□□□□□ -2.44
TRAV4A0A0B4J268 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.16□□□□□ -2.44
TRAV4A0A0B4J268 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.16□□□□□ -2.44
TRAV4A0A0B4J268 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.16□□□□□ -2.44
TRAV4A0A0B4J268 MTND4P33-201ENST00000556706 766 ntBASIC-0.16□□□□□ -2.44
TRAV4A0A0B4J268 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.16□□□□□ -2.44
TRAV4A0A0B4J268 MIR1273G-201ENST00000577677 100 ntBASIC-0.16□□□□□ -2.44
TRAV4A0A0B4J268 MIR3612-201ENST00000579753 87 ntBASIC-0.16□□□□□ -2.44
TRAV4A0A0B4J268 MIR5190-201ENST00000581537 80 ntBASIC-0.16□□□□□ -2.44
TRAV4A0A0B4J268 Z84480.1-201ENST00000605131 311 ntBASIC-0.16□□□□□ -2.44
TRAV4A0A0B4J268 RNA5SP517-201ENST00000364724 117 ntBASIC-0.17□□□□□ -2.44
TRAV4A0A0B4J268 RNY4P34-201ENST00000364779 95 ntBASIC-0.17□□□□□ -2.44
TRAV4A0A0B4J268 SNORD14.1-201ENST00000365609 90 ntBASIC-0.17□□□□□ -2.44
TRAV4A0A0B4J268 RNU2-29P-201ENST00000410423 189 ntBASIC-0.17□□□□□ -2.44
TRAV4A0A0B4J268 SNORD83.1-201ENST00000411362 77 ntBASIC-0.17□□□□□ -2.44
TRAV4A0A0B4J268 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.17□□□□□ -2.44
TRAV4A0A0B4J268 AC005534.2-201ENST00000431047 433 ntBASIC-0.17□□□□□ -2.44
TRAV4A0A0B4J268 PCNPP5-201ENST00000452246 481 ntBASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms