Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 HIF1AP1-201ENST00000553642 175 ntBASIC-0.12□□□□□ -2.43
TRAV27A0A087WT01 MTCO3P23-201ENST00000561363 289 ntBASIC-0.12□□□□□ -2.43
TRAV27A0A087WT01 MIR3612-201ENST00000579753 87 ntBASIC-0.12□□□□□ -2.43
TRAV27A0A087WT01 MIR8087-201ENST00000612745 78 ntBASIC-0.12□□□□□ -2.43
TRAV27A0A087WT01 MTND4P4-201ENST00000439033 1366 ntBASIC-0.12□□□□□ -2.43
TRAV27A0A087WT01 Y_RNA.123-201ENST00000363338 102 ntBASIC-0.13□□□□□ -2.43
TRAV27A0A087WT01 RNA5SP214-201ENST00000363378 118 ntBASIC-0.13□□□□□ -2.43
TRAV27A0A087WT01 RNU6-74P-201ENST00000384235 107 ntBASIC-0.13□□□□□ -2.43
TRAV27A0A087WT01 MIR520C-201ENST00000385005 87 ntBASIC-0.13□□□□□ -2.43
TRAV27A0A087WT01 RNU6-1106P-201ENST00000390845 107 ntBASIC-0.13□□□□□ -2.43
TRAV27A0A087WT01 RNU6-679P-201ENST00000391003 106 ntBASIC-0.13□□□□□ -2.43
TRAV27A0A087WT01 SNORA40.8-201ENST00000411034 126 ntBASIC-0.13□□□□□ -2.43
TRAV27A0A087WT01 ZNF885P-201ENST00000420174 1098 ntBASIC-0.13□□□□□ -2.43
TRAV27A0A087WT01 HSFY5P-201ENST00000453726 309 ntBASIC-0.13□□□□□ -2.43
TRAV27A0A087WT01 ELOCP24-201ENST00000456370 334 ntBASIC-0.13□□□□□ -2.43
TRAV27A0A087WT01 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.13□□□□□ -2.43
TRAV27A0A087WT01 AC091133.4-201ENST00000511142 308 ntBASIC-0.13□□□□□ -2.43
TRAV27A0A087WT01 MTATP6P9-201ENST00000515039 680 ntBASIC-0.13□□□□□ -2.43
TRAV27A0A087WT01 SNORD27.1-201ENST00000516319 72 ntBASIC-0.13□□□□□ -2.43
TRAV27A0A087WT01 Vault.3-201ENST00000516676 95 ntBASIC-0.13□□□□□ -2.43
TRAV27A0A087WT01 RNU2-46P-201ENST00000517038 113 ntBASIC-0.13□□□□□ -2.43
TRAV27A0A087WT01 AK6P2-201ENST00000549020 471 ntBASIC-0.13□□□□□ -2.43
TRAV27A0A087WT01 MIR4703-201ENST00000577728 79 ntBASIC-0.13□□□□□ -2.43
TRAV27A0A087WT01 AC104695.3-201ENST00000604052 296 ntBASIC-0.13□□□□□ -2.43
TRAV27A0A087WT01 AL157392.4-201ENST00000609756 345 ntBASIC-0.13□□□□□ -2.43
TRAV27A0A087WT01 AC121333.1-201ENST00000567488 2709 ntBASIC-0.14□□□□□ -2.43
TRAV27A0A087WT01 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.14□□□□□ -2.43
TRAV27A0A087WT01 RNU6-833P-201ENST00000363486 107 ntBASIC-0.14□□□□□ -2.43
TRAV27A0A087WT01 RNU5E-5P-201ENST00000365379 116 ntBASIC-0.14□□□□□ -2.43
TRAV27A0A087WT01 MIR450B-201ENST00000401182 78 ntBASIC-0.14□□□□□ -2.43
TRAV27A0A087WT01 AC079781.2-201ENST00000446424 169 ntBASIC-0.14□□□□□ -2.43
TRAV27A0A087WT01 SNORD65B-201ENST00000459126 73 ntBASIC-0.14□□□□□ -2.43
TRAV27A0A087WT01 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.14□□□□□ -2.43
TRAV27A0A087WT01 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.14□□□□□ -2.43
TRAV27A0A087WT01 AC005178.1-201ENST00000508392 440 ntBASIC-0.14□□□□□ -2.43
TRAV27A0A087WT01 AC092436.3-201ENST00000511788 257 ntBASIC-0.14□□□□□ -2.43
TRAV27A0A087WT01 AC022878.1-201ENST00000530684 149 ntBASIC-0.14□□□□□ -2.43
TRAV27A0A087WT01 AP002004.2-201ENST00000531656 154 ntBASIC-0.14□□□□□ -2.43
TRAV27A0A087WT01 AC093027.1-201ENST00000546698 429 ntBASIC-0.14□□□□□ -2.43
TRAV27A0A087WT01 MIR4290-201ENST00000583807 95 ntBASIC-0.14□□□□□ -2.43
TRAV27A0A087WT01 SNORA25.18-201ENST00000607153 114 ntBASIC-0.14□□□□□ -2.43
TRAV27A0A087WT01 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC-0.14□□□□□ -2.43
TRAV27A0A087WT01 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC-0.14□□□□□ -2.43
TRAV27A0A087WT01 RNU6-369P-201ENST00000362515 102 ntBASIC-0.15□□□□□ -2.43
TRAV27A0A087WT01 Y_RNA.112-201ENST00000363250 102 ntBASIC-0.15□□□□□ -2.43
TRAV27A0A087WT01 RNA5SP48-201ENST00000363969 126 ntBASIC-0.15□□□□□ -2.43
TRAV27A0A087WT01 MIR1-2-201ENST00000384961 85 ntBASIC-0.15□□□□□ -2.43
TRAV27A0A087WT01 PIGPP3-201ENST00000425307 415 ntBASIC-0.15□□□□□ -2.43
TRAV27A0A087WT01 GPR143P-201ENST00000434155 205 ntBASIC-0.15□□□□□ -2.43
TRAV27A0A087WT01 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.15□□□□□ -2.43
TRAV27A0A087WT01 AC097462.1-201ENST00000514125 324 ntBASIC-0.15□□□□□ -2.43
TRAV27A0A087WT01 RNU6-863P-201ENST00000515989 104 ntBASIC-0.15□□□□□ -2.43
TRAV27A0A087WT01 RNA5SP227-201ENST00000516184 113 ntBASIC-0.15□□□□□ -2.43
TRAV27A0A087WT01 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.15□□□□□ -2.43
TRAV27A0A087WT01 RNU6-341P-201ENST00000516973 96 ntBASIC-0.15□□□□□ -2.43
TRAV27A0A087WT01 RNU7-172P-201ENST00000517125 64 ntBASIC-0.15□□□□□ -2.43
TRAV27A0A087WT01 MIR5190-201ENST00000581537 80 ntBASIC-0.15□□□□□ -2.43
TRAV27A0A087WT01 RNU4-5P-201ENST00000607255 135 ntBASIC-0.15□□□□□ -2.43
TRAV27A0A087WT01 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-0.15□□□□□ -2.43
TRAV27A0A087WT01 SNORD114-5-201ENST00000362928 70 ntBASIC-0.16□□□□□ -2.44
TRAV27A0A087WT01 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-0.16□□□□□ -2.44
TRAV27A0A087WT01 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.16□□□□□ -2.44
TRAV27A0A087WT01 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-0.16□□□□□ -2.44
TRAV27A0A087WT01 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-0.16□□□□□ -2.44
TRAV27A0A087WT01 AL512286.1-201ENST00000439244 400 ntBASIC-0.16□□□□□ -2.44
TRAV27A0A087WT01 Z98949.2-201ENST00000440996 144 ntBASIC-0.16□□□□□ -2.44
TRAV27A0A087WT01 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.16□□□□□ -2.44
TRAV27A0A087WT01 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.16□□□□□ -2.44
TRAV27A0A087WT01 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.16□□□□□ -2.44
TRAV27A0A087WT01 AC105417.1-201ENST00000514691 285 ntBASIC-0.16□□□□□ -2.44
TRAV27A0A087WT01 RNU11-2P-201ENST00000516898 142 ntBASIC-0.16□□□□□ -2.44
TRAV27A0A087WT01 SNORA74.3-201ENST00000517108 154 ntBASIC-0.16□□□□□ -2.44
TRAV27A0A087WT01 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.16□□□□□ -2.44
TRAV27A0A087WT01 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.16□□□□□ -2.44
TRAV27A0A087WT01 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.16□□□□□ -2.44
TRAV27A0A087WT01 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC-0.16□□□□□ -2.44
TRAV27A0A087WT01 AC091178.2-201ENST00000584401 117 ntBASIC-0.16□□□□□ -2.44
TRAV27A0A087WT01 AC010620.1-201ENST00000601088 1102 ntBASIC-0.16□□□□□ -2.44
TRAV27A0A087WT01 AC104408.1-201ENST00000605241 170 ntBASIC-0.16□□□□□ -2.44
TRAV27A0A087WT01 AC010999.1-201ENST00000611856 324 ntBASIC-0.16□□□□□ -2.44
TRAV27A0A087WT01 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.16□□□□□ -2.44
TRAV27A0A087WT01 AC073544.1-201ENST00000600110 1595 ntBASIC-0.16□□□□□ -2.44
TRAV27A0A087WT01 RNU5F-7P-201ENST00000363696 115 ntBASIC-0.17□□□□□ -2.44
TRAV27A0A087WT01 RNU4-41P-201ENST00000364426 143 ntBASIC-0.17□□□□□ -2.44
TRAV27A0A087WT01 RNU6-716P-201ENST00000365621 103 ntBASIC-0.17□□□□□ -2.44
TRAV27A0A087WT01 Y_RNA.399-201ENST00000383955 105 ntBASIC-0.17□□□□□ -2.44
TRAV27A0A087WT01 MIR562-201ENST00000384894 95 ntBASIC-0.17□□□□□ -2.44
TRAV27A0A087WT01 MIR452-201ENST00000385020 85 ntBASIC-0.17□□□□□ -2.44
TRAV27A0A087WT01 MIR516B2-201ENST00000385190 85 ntBASIC-0.17□□□□□ -2.44
TRAV27A0A087WT01 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-0.17□□□□□ -2.44
TRAV27A0A087WT01 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.17□□□□□ -2.44
TRAV27A0A087WT01 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.17□□□□□ -2.44
TRAV27A0A087WT01 AC084290.1-201ENST00000434995 374 ntBASIC-0.17□□□□□ -2.44
TRAV27A0A087WT01 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC-0.17□□□□□ -2.44
TRAV27A0A087WT01 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-0.17□□□□□ -2.44
TRAV27A0A087WT01 RNU7-167P-201ENST00000459160 62 ntBASIC-0.17□□□□□ -2.44
TRAV27A0A087WT01 Y_RNA.673-201ENST00000516306 88 ntBASIC-0.17□□□□□ -2.44
TRAV27A0A087WT01 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.17□□□□□ -2.44
TRAV27A0A087WT01 RPL21P9-201ENST00000556149 474 ntBASIC-0.17□□□□□ -2.44
TRAV27A0A087WT01 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 235.4 ms