Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.13□□□□□ -2.39
SCN10AQ9Y5Y9 AP001180.6-201ENST00000584918 159 ntBASIC0.13□□□□□ -2.39
SCN10AQ9Y5Y9 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.13□□□□□ -2.39
SCN10AQ9Y5Y9 RNU6-1305P-201ENST00000364353 104 ntBASIC0.12□□□□□ -2.39
SCN10AQ9Y5Y9 SNORD105-201ENST00000386910 85 ntBASIC0.12□□□□□ -2.39
SCN10AQ9Y5Y9 Y_RNA.608-201ENST00000410647 95 ntBASIC0.12□□□□□ -2.39
SCN10AQ9Y5Y9 AL365184.2-201ENST00000431139 435 ntBASIC0.12□□□□□ -2.39
SCN10AQ9Y5Y9 AC104692.1-201ENST00000472406 90 ntBASIC0.12□□□□□ -2.39
SCN10AQ9Y5Y9 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.12□□□□□ -2.39
SCN10AQ9Y5Y9 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.12□□□□□ -2.39
SCN10AQ9Y5Y9 AC010493.1-201ENST00000513479 292 ntBASIC0.12□□□□□ -2.39
SCN10AQ9Y5Y9 Vault.3-201ENST00000516676 95 ntBASIC0.12□□□□□ -2.39
SCN10AQ9Y5Y9 AC022616.3-201ENST00000523940 148 ntBASIC0.12□□□□□ -2.39
SCN10AQ9Y5Y9 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.12□□□□□ -2.39
SCN10AQ9Y5Y9 MIR4999-201ENST00000585029 91 ntBASIC0.12□□□□□ -2.39
SCN10AQ9Y5Y9 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.12□□□□□ -2.39
SCN10AQ9Y5Y9 AC104695.3-201ENST00000604052 296 ntBASIC0.12□□□□□ -2.39
SCN10AQ9Y5Y9 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.12□□□□□ -2.39
SCN10AQ9Y5Y9 AC006927.3-201ENST00000638789 384 ntBASIC0.12□□□□□ -2.39
SCN10AQ9Y5Y9 RNU6-931P-201ENST00000363850 107 ntBASIC0.12□□□□□ -2.39
SCN10AQ9Y5Y9 RNU6-501P-201ENST00000364072 100 ntBASIC0.12□□□□□ -2.39
SCN10AQ9Y5Y9 SNORA20.2-201ENST00000383922 131 ntBASIC0.12□□□□□ -2.39
SCN10AQ9Y5Y9 RNU6-700P-201ENST00000391043 107 ntBASIC0.12□□□□□ -2.39
SCN10AQ9Y5Y9 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.12□□□□□ -2.39
SCN10AQ9Y5Y9 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.12□□□□□ -2.39
SCN10AQ9Y5Y9 RNU7-99P-201ENST00000516271 62 ntBASIC0.12□□□□□ -2.39
SCN10AQ9Y5Y9 Y_RNA.672-201ENST00000516289 104 ntBASIC0.12□□□□□ -2.39
SCN10AQ9Y5Y9 RNA5SP454-201ENST00000517231 127 ntBASIC0.12□□□□□ -2.39
SCN10AQ9Y5Y9 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.12□□□□□ -2.39
SCN10AQ9Y5Y9 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC0.12□□□□□ -2.39
SCN10AQ9Y5Y9 MTND1P35-201ENST00000526739 508 ntBASIC0.12□□□□□ -2.39
SCN10AQ9Y5Y9 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
SCN10AQ9Y5Y9 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.12□□□□□ -2.39
SCN10AQ9Y5Y9 AL157392.4-201ENST00000609756 345 ntBASIC0.12□□□□□ -2.39
SCN10AQ9Y5Y9 AP000240.1-201ENST00000609910 452 ntBASIC0.12□□□□□ -2.39
SCN10AQ9Y5Y9 AL078595.3-201ENST00000623815 1166 ntBASIC0.12□□□□□ -2.39
SCN10AQ9Y5Y9 AC022418.1-201ENST00000624118 445 ntBASIC0.12□□□□□ -2.39
SCN10AQ9Y5Y9 ZNF204P-201ENST00000416749 2397 ntBASIC0.11□□□□□ -2.39
SCN10AQ9Y5Y9 RNU5F-6P-201ENST00000362979 116 ntBASIC0.11□□□□□ -2.39
SCN10AQ9Y5Y9 MIR454-201ENST00000390180 115 ntBASIC0.11□□□□□ -2.39
SCN10AQ9Y5Y9 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
SCN10AQ9Y5Y9 RNA5SP222-201ENST00000411039 105 ntBASIC0.11□□□□□ -2.39
SCN10AQ9Y5Y9 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.11□□□□□ -2.39
SCN10AQ9Y5Y9 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.11□□□□□ -2.39
SCN10AQ9Y5Y9 TPT1P7-201ENST00000458300 517 ntBASIC0.11□□□□□ -2.39
SCN10AQ9Y5Y9 RNU7-182P-201ENST00000459009 62 ntBASIC0.11□□□□□ -2.39
SCN10AQ9Y5Y9 AC007215.1-201ENST00000464893 276 ntBASIC0.11□□□□□ -2.39
SCN10AQ9Y5Y9 AC091021.1-201ENST00000468051 388 ntBASIC0.11□□□□□ -2.39
SCN10AQ9Y5Y9 AC108740.1-201ENST00000498629 225 ntBASIC0.11□□□□□ -2.39
SCN10AQ9Y5Y9 SNORA68.3-201ENST00000515906 83 ntBASIC0.11□□□□□ -2.39
SCN10AQ9Y5Y9 IGLVI-20-201ENST00000519296 130 ntBASIC0.11□□□□□ -2.39
SCN10AQ9Y5Y9 AC027288.2-201ENST00000553028 243 ntBASIC0.11□□□□□ -2.39
SCN10AQ9Y5Y9 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.11□□□□□ -2.39
SCN10AQ9Y5Y9 MIR4438-201ENST00000585271 93 ntBASIC0.11□□□□□ -2.39
SCN10AQ9Y5Y9 AP000907.4-201ENST00000604143 237 ntBASIC0.11□□□□□ -2.39
SCN10AQ9Y5Y9 SNORA9.1-201ENST00000362412 131 ntBASIC0.1□□□□□ -2.39
SCN10AQ9Y5Y9 SNORA2.2-201ENST00000365473 135 ntBASIC0.1□□□□□ -2.39
SCN10AQ9Y5Y9 SNORD70.1-201ENST00000391007 85 ntBASIC0.1□□□□□ -2.39
SCN10AQ9Y5Y9 RNU4-46P-201ENST00000410818 138 ntBASIC0.1□□□□□ -2.39
SCN10AQ9Y5Y9 Z95118.1-201ENST00000421372 247 ntBASIC0.1□□□□□ -2.39
SCN10AQ9Y5Y9 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.1□□□□□ -2.39
SCN10AQ9Y5Y9 AL133217.1-201ENST00000450980 425 ntBASIC0.1□□□□□ -2.39
SCN10AQ9Y5Y9 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
SCN10AQ9Y5Y9 MTCO3P8-201ENST00000453691 755 ntBASIC0.1□□□□□ -2.39
SCN10AQ9Y5Y9 AC093850.1-201ENST00000454121 251 ntBASIC0.1□□□□□ -2.39
SCN10AQ9Y5Y9 RPS29P15-201ENST00000458329 171 ntBASIC0.1□□□□□ -2.39
SCN10AQ9Y5Y9 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.1□□□□□ -2.39
SCN10AQ9Y5Y9 RNU6-1198P-201ENST00000516904 67 ntBASIC0.1□□□□□ -2.39
SCN10AQ9Y5Y9 RNU6-1096P-201ENST00000517089 102 ntBASIC0.1□□□□□ -2.39
SCN10AQ9Y5Y9 AP003716.2-201ENST00000528260 108 ntBASIC0.1□□□□□ -2.39
SCN10AQ9Y5Y9 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.1□□□□□ -2.39
SCN10AQ9Y5Y9 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.1□□□□□ -2.39
SCN10AQ9Y5Y9 ELOCP32-201ENST00000548625 324 ntBASIC0.1□□□□□ -2.39
SCN10AQ9Y5Y9 SUB1P2-201ENST00000556401 297 ntBASIC0.1□□□□□ -2.39
SCN10AQ9Y5Y9 LARP7P1-201ENST00000605576 316 ntBASIC0.1□□□□□ -2.39
SCN10AQ9Y5Y9 AL607023.1-201ENST00000620045 248 ntBASIC0.1□□□□□ -2.39
SCN10AQ9Y5Y9 Y_RNA.136-201ENST00000363444 102 ntBASIC0.1□□□□□ -2.39
SCN10AQ9Y5Y9 SNORD114-15-201ENST00000364687 72 ntBASIC0.1□□□□□ -2.39
SCN10AQ9Y5Y9 SNORD115-7-201ENST00000365306 82 ntBASIC0.1□□□□□ -2.39
SCN10AQ9Y5Y9 RNU6-933P-201ENST00000384424 107 ntBASIC0.1□□□□□ -2.39
SCN10AQ9Y5Y9 SNORD41-201ENST00000386967 70 ntBASIC0.1□□□□□ -2.39
SCN10AQ9Y5Y9 MTND3P9-201ENST00000429526 346 ntBASIC0.1□□□□□ -2.39
SCN10AQ9Y5Y9 AC067940.1-201ENST00000458411 300 ntBASIC0.1□□□□□ -2.39
SCN10AQ9Y5Y9 OR9P1P-201ENST00000496431 281 ntBASIC0.1□□□□□ -2.39
SCN10AQ9Y5Y9 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.1□□□□□ -2.39
SCN10AQ9Y5Y9 AC025647.1-201ENST00000517879 253 ntBASIC0.1□□□□□ -2.39
SCN10AQ9Y5Y9 AF235103.2-201ENST00000525753 346 ntBASIC0.1□□□□□ -2.39
SCN10AQ9Y5Y9 MRPS36P4-201ENST00000534436 298 ntBASIC0.1□□□□□ -2.39
SCN10AQ9Y5Y9 AC002044.1-201ENST00000606707 158 ntBASIC0.1□□□□□ -2.39
SCN10AQ9Y5Y9 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.1□□□□□ -2.39
SCN10AQ9Y5Y9 AC006504.8-201ENST00000621046 635 ntBASIC0.1□□□□□ -2.39
SCN10AQ9Y5Y9 RNU5B-2P-201ENST00000363036 113 ntBASIC0.09□□□□□ -2.39
SCN10AQ9Y5Y9 Y_RNA.185-201ENST00000363894 100 ntBASIC0.09□□□□□ -2.39
SCN10AQ9Y5Y9 RNU6-923P-201ENST00000364753 107 ntBASIC0.09□□□□□ -2.39
SCN10AQ9Y5Y9 MIR140-201ENST00000385282 100 ntBASIC0.09□□□□□ -2.39
SCN10AQ9Y5Y9 U8.16-201ENST00000391279 133 ntBASIC0.09□□□□□ -2.39
SCN10AQ9Y5Y9 AL162725.1-201ENST00000435405 301 ntBASIC0.09□□□□□ -2.39
SCN10AQ9Y5Y9 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.09□□□□□ -2.39
SCN10AQ9Y5Y9 Z98949.2-201ENST00000440996 144 ntBASIC0.09□□□□□ -2.39
SCN10AQ9Y5Y9 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.09□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 178 ms