Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 MIR514B-201ENST00000516774 80 ntBASIC2.22□□□□□ -2.05
SNX9Q9Y5X1 RNU6-897P-201ENST00000517135 105 ntBASIC2.22□□□□□ -2.05
SNX9Q9Y5X1 IGKV3-31-201ENST00000523109 329 ntBASIC2.22□□□□□ -2.05
SNX9Q9Y5X1 MIR3126-201ENST00000577443 74 ntBASIC2.22□□□□□ -2.05
SNX9Q9Y5X1 MIR4659A-201ENST00000580269 81 ntBASIC2.22□□□□□ -2.05
SNX9Q9Y5X1 MIR5002-201ENST00000584713 97 ntBASIC2.22□□□□□ -2.05
SNX9Q9Y5X1 AC002984.1-201ENST00000591692 448 ntBASIC2.22□□□□□ -2.05
SNX9Q9Y5X1 AL390123.1-201ENST00000603216 237 ntBASIC2.22□□□□□ -2.05
SNX9Q9Y5X1 MIR1248-201ENST00000629190 106 ntBASIC2.22□□□□□ -2.05
SNX9Q9Y5X1 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.22□□□□□ -2.05
SNX9Q9Y5X1 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
SNX9Q9Y5X1 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
SNX9Q9Y5X1 MTND5P35-201ENST00000557537 1720 ntBASIC2.22□□□□□ -2.05
SNX9Q9Y5X1 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.22□□□□□ -2.05
SNX9Q9Y5X1 Y_RNA.105-201ENST00000363182 111 ntBASIC2.21□□□□□ -2.06
SNX9Q9Y5X1 RNU6-1309P-201ENST00000363305 108 ntBASIC2.21□□□□□ -2.06
SNX9Q9Y5X1 Y_RNA.179-201ENST00000363844 90 ntBASIC2.21□□□□□ -2.06
SNX9Q9Y5X1 Y_RNA.210-201ENST00000364161 110 ntBASIC2.21□□□□□ -2.06
SNX9Q9Y5X1 Y_RNA.276-201ENST00000364732 109 ntBASIC2.21□□□□□ -2.06
SNX9Q9Y5X1 RNA5SP37-201ENST00000365420 130 ntBASIC2.21□□□□□ -2.06
SNX9Q9Y5X1 MRPL35P1-201ENST00000404272 572 ntBASIC2.21□□□□□ -2.06
SNX9Q9Y5X1 ELOCP21-201ENST00000412558 336 ntBASIC2.21□□□□□ -2.06
SNX9Q9Y5X1 MRPS35P2-201ENST00000508242 191 ntBASIC2.21□□□□□ -2.06
SNX9Q9Y5X1 SNORA48.11-201ENST00000517015 89 ntBASIC2.21□□□□□ -2.06
SNX9Q9Y5X1 SNORA31.25-201ENST00000517242 134 ntBASIC2.21□□□□□ -2.06
SNX9Q9Y5X1 RPL17P51-201ENST00000605218 238 ntBASIC2.21□□□□□ -2.06
SNX9Q9Y5X1 Y_RNA.783-201ENST00000613546 102 ntBASIC2.21□□□□□ -2.06
SNX9Q9Y5X1 MIR6715A-201ENST00000615929 79 ntBASIC2.21□□□□□ -2.06
SNX9Q9Y5X1 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
SNX9Q9Y5X1 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.21□□□□□ -2.06
SNX9Q9Y5X1 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.2□□□□□ -2.06
SNX9Q9Y5X1 RNU6-961P-201ENST00000363893 105 ntBASIC2.2□□□□□ -2.06
SNX9Q9Y5X1 RNU6-806P-201ENST00000365147 105 ntBASIC2.2□□□□□ -2.06
SNX9Q9Y5X1 RNU6-793P-201ENST00000384233 104 ntBASIC2.2□□□□□ -2.06
SNX9Q9Y5X1 SNORD78.2-201ENST00000391076 69 ntBASIC2.2□□□□□ -2.06
SNX9Q9Y5X1 MIR1294-201ENST00000408503 142 ntBASIC2.2□□□□□ -2.06
SNX9Q9Y5X1 RNU6-121P-201ENST00000410525 99 ntBASIC2.2□□□□□ -2.06
SNX9Q9Y5X1 AL139156.1-201ENST00000412785 841 ntBASIC2.2□□□□□ -2.06
SNX9Q9Y5X1 AL445646.1-201ENST00000431784 216 ntBASIC2.2□□□□□ -2.06
SNX9Q9Y5X1 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SNX9Q9Y5X1 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.2□□□□□ -2.06
SNX9Q9Y5X1 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.2□□□□□ -2.06
SNX9Q9Y5X1 PCNPP5-201ENST00000452246 481 ntBASIC2.2□□□□□ -2.06
SNX9Q9Y5X1 ATP5EP1-201ENST00000510257 156 ntBASIC2.2□□□□□ -2.06
SNX9Q9Y5X1 Y_RNA.683-201ENST00000516508 93 ntBASIC2.2□□□□□ -2.06
SNX9Q9Y5X1 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.2□□□□□ -2.06
SNX9Q9Y5X1 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.2□□□□□ -2.06
SNX9Q9Y5X1 RRN3P3-201ENST00000549207 578 ntBASIC2.2□□□□□ -2.06
SNX9Q9Y5X1 AC008269.2-201ENST00000561915 1105 ntBASIC2.2□□□□□ -2.06
SNX9Q9Y5X1 AC233702.2-202ENST00000562547 291 ntBASIC2.2□□□□□ -2.06
SNX9Q9Y5X1 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.2□□□□□ -2.06
SNX9Q9Y5X1 AC136932.1-201ENST00000574771 208 ntBASIC2.2□□□□□ -2.06
SNX9Q9Y5X1 MIR4529-201ENST00000578110 78 ntBASIC2.2□□□□□ -2.06
SNX9Q9Y5X1 MIR5006-201ENST00000583027 110 ntBASIC2.2□□□□□ -2.06
SNX9Q9Y5X1 AC007229.1-201ENST00000590455 412 ntBASIC2.2□□□□□ -2.06
SNX9Q9Y5X1 PRR13P7-201ENST00000605538 430 ntBASIC2.2□□□□□ -2.06
SNX9Q9Y5X1 AC008121.3-201ENST00000618726 433 ntBASIC2.2□□□□□ -2.06
SNX9Q9Y5X1 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
SNX9Q9Y5X1 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.2□□□□□ -2.06
SNX9Q9Y5X1 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.19□□□□□ -2.06
SNX9Q9Y5X1 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
SNX9Q9Y5X1 Y_RNA.183-201ENST00000363882 113 ntBASIC2.19□□□□□ -2.06
SNX9Q9Y5X1 RNU6-926P-201ENST00000384075 107 ntBASIC2.19□□□□□ -2.06
SNX9Q9Y5X1 EDDM3CP-201ENST00000415977 425 ntBASIC2.19□□□□□ -2.06
SNX9Q9Y5X1 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.19□□□□□ -2.06
SNX9Q9Y5X1 AC055731.1-201ENST00000474387 401 ntBASIC2.19□□□□□ -2.06
SNX9Q9Y5X1 RPS27P21-201ENST00000486977 252 ntBASIC2.19□□□□□ -2.06
SNX9Q9Y5X1 MTCO2P24-201ENST00000515611 426 ntBASIC2.19□□□□□ -2.06
SNX9Q9Y5X1 SNORA40.9-201ENST00000515895 93 ntBASIC2.19□□□□□ -2.06
SNX9Q9Y5X1 RNU6-397P-201ENST00000516226 104 ntBASIC2.19□□□□□ -2.06
SNX9Q9Y5X1 RNU2-19P-201ENST00000517288 84 ntBASIC2.19□□□□□ -2.06
SNX9Q9Y5X1 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.19□□□□□ -2.06
SNX9Q9Y5X1 AC022616.8-201ENST00000533569 253 ntBASIC2.19□□□□□ -2.06
SNX9Q9Y5X1 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.19□□□□□ -2.06
SNX9Q9Y5X1 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.19□□□□□ -2.06
SNX9Q9Y5X1 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SNX9Q9Y5X1 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SNX9Q9Y5X1 Y_RNA.47-201ENST00000362697 108 ntBASIC2.18□□□□□ -2.06
SNX9Q9Y5X1 RNU6-727P-201ENST00000363592 107 ntBASIC2.18□□□□□ -2.06
SNX9Q9Y5X1 RNU5F-3P-201ENST00000363767 117 ntBASIC2.18□□□□□ -2.06
SNX9Q9Y5X1 RNU6-770P-201ENST00000363929 105 ntBASIC2.18□□□□□ -2.06
SNX9Q9Y5X1 Y_RNA.222-201ENST00000364264 102 ntBASIC2.18□□□□□ -2.06
SNX9Q9Y5X1 SNORA16B-201ENST00000364674 135 ntBASIC2.18□□□□□ -2.06
SNX9Q9Y5X1 RNU6-234P-201ENST00000365229 104 ntBASIC2.18□□□□□ -2.06
SNX9Q9Y5X1 Y_RNA.415-201ENST00000384012 112 ntBASIC2.18□□□□□ -2.06
SNX9Q9Y5X1 Y_RNA.512-201ENST00000384518 102 ntBASIC2.18□□□□□ -2.06
SNX9Q9Y5X1 MIR17-201ENST00000385012 84 ntBASIC2.18□□□□□ -2.06
SNX9Q9Y5X1 MIR320B2-201ENST00000408479 138 ntBASIC2.18□□□□□ -2.06
SNX9Q9Y5X1 RNU2-2P-201ENST00000410396 191 ntBASIC2.18□□□□□ -2.06
SNX9Q9Y5X1 Y_RNA.595-201ENST00000410403 105 ntBASIC2.18□□□□□ -2.06
SNX9Q9Y5X1 RNU2-32P-201ENST00000411193 191 ntBASIC2.18□□□□□ -2.06
SNX9Q9Y5X1 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.18□□□□□ -2.06
SNX9Q9Y5X1 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.18□□□□□ -2.06
SNX9Q9Y5X1 MTCYBP9-201ENST00000431021 303 ntBASIC2.18□□□□□ -2.06
SNX9Q9Y5X1 AL121890.1-201ENST00000435457 205 ntBASIC2.18□□□□□ -2.06
SNX9Q9Y5X1 RPS23P5-201ENST00000495419 428 ntBASIC2.18□□□□□ -2.06
SNX9Q9Y5X1 YWHAEP4-201ENST00000505390 198 ntBASIC2.18□□□□□ -2.06
SNX9Q9Y5X1 RNU6-965P-201ENST00000516721 96 ntBASIC2.18□□□□□ -2.06
SNX9Q9Y5X1 RNA5SP137-201ENST00000516833 135 ntBASIC2.18□□□□□ -2.06
SNX9Q9Y5X1 CYCSP23-201ENST00000519781 313 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 274 ms