Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 RNU2-1-201ENST00000618664 191 ntBASIC2.7□□□□□ -1.98
COL4A3BPQ9Y5P4 U2.6-201ENST00000619225 191 ntBASIC2.7□□□□□ -1.98
COL4A3BPQ9Y5P4 U2.5-201ENST00000619465 191 ntBASIC2.7□□□□□ -1.98
COL4A3BPQ9Y5P4 U2.10-201ENST00000620268 191 ntBASIC2.7□□□□□ -1.98
COL4A3BPQ9Y5P4 AL162373.1-201ENST00000620433 407 ntBASIC2.7□□□□□ -1.98
COL4A3BPQ9Y5P4 AC006435.5-201ENST00000624486 112 ntBASIC2.7□□□□□ -1.98
COL4A3BPQ9Y5P4 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.69□□□□□ -1.98
COL4A3BPQ9Y5P4 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.69□□□□□ -1.98
COL4A3BPQ9Y5P4 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
COL4A3BPQ9Y5P4 Y_RNA.230-201ENST00000364348 109 ntBASIC2.69□□□□□ -1.98
COL4A3BPQ9Y5P4 Y_RNA.471-201ENST00000384312 102 ntBASIC2.69□□□□□ -1.98
COL4A3BPQ9Y5P4 AC016909.1-201ENST00000415916 166 ntBASIC2.69□□□□□ -1.98
COL4A3BPQ9Y5P4 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.69□□□□□ -1.98
COL4A3BPQ9Y5P4 CST2P1-201ENST00000425770 87 ntBASIC2.69□□□□□ -1.98
COL4A3BPQ9Y5P4 RN7SL429P-201ENST00000479090 223 ntBASIC2.69□□□□□ -1.98
COL4A3BPQ9Y5P4 RN7SL489P-201ENST00000486185 223 ntBASIC2.69□□□□□ -1.98
COL4A3BPQ9Y5P4 RN7SL327P-201ENST00000488659 223 ntBASIC2.69□□□□□ -1.98
COL4A3BPQ9Y5P4 AC234781.5-201ENST00000508429 271 ntBASIC2.69□□□□□ -1.98
COL4A3BPQ9Y5P4 AC008413.1-201ENST00000511864 177 ntBASIC2.69□□□□□ -1.98
COL4A3BPQ9Y5P4 AC091544.4-201ENST00000555268 342 ntBASIC2.69□□□□□ -1.98
COL4A3BPQ9Y5P4 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.69□□□□□ -1.98
COL4A3BPQ9Y5P4 MIR4298-201ENST00000584380 73 ntBASIC2.69□□□□□ -1.98
COL4A3BPQ9Y5P4 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.69□□□□□ -1.98
COL4A3BPQ9Y5P4 AC011476.5-201ENST00000615594 130 ntBASIC2.69□□□□□ -1.98
COL4A3BPQ9Y5P4 RN7SL853P-201ENST00000617250 223 ntBASIC2.69□□□□□ -1.98
COL4A3BPQ9Y5P4 AL590808.1-201ENST00000618696 141 ntBASIC2.69□□□□□ -1.98
COL4A3BPQ9Y5P4 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.69□□□□□ -1.98
COL4A3BPQ9Y5P4 RNU6-961P-201ENST00000363893 105 ntBASIC2.68□□□□□ -1.98
COL4A3BPQ9Y5P4 Y_RNA.389-201ENST00000383924 113 ntBASIC2.68□□□□□ -1.98
COL4A3BPQ9Y5P4 Y_RNA.422-201ENST00000384054 114 ntBASIC2.68□□□□□ -1.98
COL4A3BPQ9Y5P4 Y_RNA.439-201ENST00000384119 94 ntBASIC2.68□□□□□ -1.98
COL4A3BPQ9Y5P4 Y_RNA.551-201ENST00000384661 102 ntBASIC2.68□□□□□ -1.98
COL4A3BPQ9Y5P4 AL512604.1-201ENST00000404812 257 ntBASIC2.68□□□□□ -1.98
COL4A3BPQ9Y5P4 RNA5SP181-201ENST00000410246 98 ntBASIC2.68□□□□□ -1.98
COL4A3BPQ9Y5P4 RNA5SP501-201ENST00000410990 112 ntBASIC2.68□□□□□ -1.98
COL4A3BPQ9Y5P4 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.68□□□□□ -1.98
COL4A3BPQ9Y5P4 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
COL4A3BPQ9Y5P4 RNA5SP82-201ENST00000516707 92 ntBASIC2.68□□□□□ -1.98
COL4A3BPQ9Y5P4 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.68□□□□□ -1.98
COL4A3BPQ9Y5P4 MIR4287-201ENST00000579398 78 ntBASIC2.68□□□□□ -1.98
COL4A3BPQ9Y5P4 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.68□□□□□ -1.98
COL4A3BPQ9Y5P4 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.68□□□□□ -1.98
COL4A3BPQ9Y5P4 AC006380.1-201ENST00000603598 186 ntBASIC2.68□□□□□ -1.98
COL4A3BPQ9Y5P4 AC069114.2-201ENST00000604699 304 ntBASIC2.68□□□□□ -1.98
COL4A3BPQ9Y5P4 MIR1291-201ENST00000627649 87 ntBASIC2.68□□□□□ -1.98
COL4A3BPQ9Y5P4 AC016717.2-201ENST00000609089 5141 ntBASIC2.68□□□□□ -1.98
COL4A3BPQ9Y5P4 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
COL4A3BPQ9Y5P4 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.67□□□□□ -1.98
COL4A3BPQ9Y5P4 ZNF702P-202ENST00000434269 1966 ntBASIC2.67□□□□□ -1.98
COL4A3BPQ9Y5P4 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
COL4A3BPQ9Y5P4 RNU6-626P-201ENST00000363354 107 ntBASIC2.67□□□□□ -1.98
COL4A3BPQ9Y5P4 RNU1-96P-201ENST00000364163 162 ntBASIC2.67□□□□□ -1.98
COL4A3BPQ9Y5P4 Y_RNA.216-201ENST00000364205 93 ntBASIC2.67□□□□□ -1.98
COL4A3BPQ9Y5P4 SNORA16B-201ENST00000364674 135 ntBASIC2.67□□□□□ -1.98
COL4A3BPQ9Y5P4 SNORA33.2-201ENST00000365413 134 ntBASIC2.67□□□□□ -1.98
COL4A3BPQ9Y5P4 RNU6-639P-201ENST00000384074 107 ntBASIC2.67□□□□□ -1.98
COL4A3BPQ9Y5P4 Y_RNA.458-201ENST00000384240 102 ntBASIC2.67□□□□□ -1.98
COL4A3BPQ9Y5P4 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
COL4A3BPQ9Y5P4 AL390729.2-201ENST00000416137 156 ntBASIC2.67□□□□□ -1.98
COL4A3BPQ9Y5P4 AL158823.1-201ENST00000418441 478 ntBASIC2.67□□□□□ -1.98
COL4A3BPQ9Y5P4 AC010598.1-201ENST00000510378 103 ntBASIC2.67□□□□□ -1.98
COL4A3BPQ9Y5P4 AL137100.2-201ENST00000555786 315 ntBASIC2.67□□□□□ -1.98
COL4A3BPQ9Y5P4 MYL12BP1-201ENST00000569826 507 ntBASIC2.67□□□□□ -1.98
COL4A3BPQ9Y5P4 SNORD53-201ENST00000579969 78 ntBASIC2.67□□□□□ -1.98
COL4A3BPQ9Y5P4 MIR4719-201ENST00000585233 84 ntBASIC2.67□□□□□ -1.98
COL4A3BPQ9Y5P4 AC103810.6-201ENST00000606708 136 ntBASIC2.67□□□□□ -1.98
COL4A3BPQ9Y5P4 AC067747.1-201ENST00000608026 250 ntBASIC2.67□□□□□ -1.98
COL4A3BPQ9Y5P4 MIR338-201ENST00000636369 67 ntBASIC2.67□□□□□ -1.98
COL4A3BPQ9Y5P4 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
COL4A3BPQ9Y5P4 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
COL4A3BPQ9Y5P4 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.66□□□□□ -1.98
COL4A3BPQ9Y5P4 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
COL4A3BPQ9Y5P4 RNU6-862P-201ENST00000362804 105 ntBASIC2.66□□□□□ -1.98
COL4A3BPQ9Y5P4 Y_RNA.380-201ENST00000365663 111 ntBASIC2.66□□□□□ -1.98
COL4A3BPQ9Y5P4 RNU6-20P-201ENST00000384106 107 ntBASIC2.66□□□□□ -1.98
COL4A3BPQ9Y5P4 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
COL4A3BPQ9Y5P4 RPEP5-201ENST00000441137 268 ntBASIC2.66□□□□□ -1.98
COL4A3BPQ9Y5P4 AC021269.2-201ENST00000532318 330 ntBASIC2.66□□□□□ -1.98
COL4A3BPQ9Y5P4 MIR6895-201ENST00000613497 78 ntBASIC2.66□□□□□ -1.98
COL4A3BPQ9Y5P4 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
COL4A3BPQ9Y5P4 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.66□□□□□ -1.98
COL4A3BPQ9Y5P4 MIR21-201ENST00000362134 72 ntBASIC2.65□□□□□ -1.99
COL4A3BPQ9Y5P4 RNU6-271P-201ENST00000363858 105 ntBASIC2.65□□□□□ -1.99
COL4A3BPQ9Y5P4 SNORD114-30-201ENST00000364448 72 ntBASIC2.65□□□□□ -1.99
COL4A3BPQ9Y5P4 Y_RNA.462-201ENST00000384268 102 ntBASIC2.65□□□□□ -1.99
COL4A3BPQ9Y5P4 RNU6-823P-201ENST00000391042 103 ntBASIC2.65□□□□□ -1.99
COL4A3BPQ9Y5P4 Y_RNA.645-201ENST00000391229 102 ntBASIC2.65□□□□□ -1.99
COL4A3BPQ9Y5P4 AL079342.1-201ENST00000401460 267 ntBASIC2.65□□□□□ -1.99
COL4A3BPQ9Y5P4 RNU4-53P-201ENST00000410828 140 ntBASIC2.65□□□□□ -1.99
COL4A3BPQ9Y5P4 RNU5A-5P-201ENST00000411054 116 ntBASIC2.65□□□□□ -1.99
COL4A3BPQ9Y5P4 AC096920.1-201ENST00000423991 241 ntBASIC2.65□□□□□ -1.99
COL4A3BPQ9Y5P4 AC026436.1-201ENST00000510537 270 ntBASIC2.65□□□□□ -1.99
COL4A3BPQ9Y5P4 RNA5SP24-201ENST00000516478 95 ntBASIC2.65□□□□□ -1.99
COL4A3BPQ9Y5P4 Y_RNA.715-201ENST00000517082 110 ntBASIC2.65□□□□□ -1.99
COL4A3BPQ9Y5P4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.65□□□□□ -1.99
COL4A3BPQ9Y5P4 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.65□□□□□ -1.99
COL4A3BPQ9Y5P4 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.65□□□□□ -1.99
COL4A3BPQ9Y5P4 AC104695.3-201ENST00000604052 296 ntBASIC2.65□□□□□ -1.99
COL4A3BPQ9Y5P4 AC046143.2-201ENST00000609789 160 ntBASIC2.65□□□□□ -1.99
COL4A3BPQ9Y5P4 AC004467.1-201ENST00000615678 330 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 179.1 ms