Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 MIR2115-201ENST00000516657 100 ntBASIC-1□□□□□ -2.57
AP4S1Q9Y587 AC103996.1-201ENST00000555468 102 ntBASIC-1□□□□□ -2.57
AP4S1Q9Y587 MIR4436A-201ENST00000585278 85 ntBASIC-1□□□□□ -2.57
AP4S1Q9Y587 AC010525.2-201ENST00000590920 195 ntBASIC-1□□□□□ -2.57
AP4S1Q9Y587 AL442067.1-201ENST00000613261 223 ntBASIC-1□□□□□ -2.57
AP4S1Q9Y587 AL359547.2-201ENST00000615810 418 ntBASIC-1□□□□□ -2.57
AP4S1Q9Y587 MIR6514-201ENST00000622549 70 ntBASIC-1□□□□□ -2.57
AP4S1Q9Y587 AP002782.1-201ENST00000623107 614 ntBASIC-1□□□□□ -2.57
AP4S1Q9Y587 RNU6-674P-201ENST00000363831 107 ntBASIC-1.01□□□□□ -2.57
AP4S1Q9Y587 RNA5SP117-201ENST00000365294 118 ntBASIC-1.01□□□□□ -2.57
AP4S1Q9Y587 RNU5E-6P-201ENST00000365574 115 ntBASIC-1.01□□□□□ -2.57
AP4S1Q9Y587 MTCO1P17-201ENST00000411522 491 ntBASIC-1.01□□□□□ -2.57
AP4S1Q9Y587 AL022718.1-201ENST00000412004 84 ntBASIC-1.01□□□□□ -2.57
AP4S1Q9Y587 MLLT10P1-201ENST00000418346 262 ntBASIC-1.01□□□□□ -2.57
AP4S1Q9Y587 MTND1P4-201ENST00000435196 415 ntBASIC-1.01□□□□□ -2.57
AP4S1Q9Y587 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-1.01□□□□□ -2.57
AP4S1Q9Y587 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-1.01□□□□□ -2.57
AP4S1Q9Y587 AC079781.2-201ENST00000446424 169 ntBASIC-1.01□□□□□ -2.57
AP4S1Q9Y587 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-1.01□□□□□ -2.57
AP4S1Q9Y587 RNU7-102P-201ENST00000458948 62 ntBASIC-1.01□□□□□ -2.57
AP4S1Q9Y587 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-1.01□□□□□ -2.57
AP4S1Q9Y587 RNU6-1291P-201ENST00000516591 104 ntBASIC-1.01□□□□□ -2.57
AP4S1Q9Y587 RNU7-28P-201ENST00000516759 62 ntBASIC-1.01□□□□□ -2.57
AP4S1Q9Y587 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-1.01□□□□□ -2.57
AP4S1Q9Y587 AC104383.1-201ENST00000530297 370 ntBASIC-1.01□□□□□ -2.57
AP4S1Q9Y587 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-1.01□□□□□ -2.57
AP4S1Q9Y587 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-1.01□□□□□ -2.57
AP4S1Q9Y587 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-1.01□□□□□ -2.57
AP4S1Q9Y587 MIR4263-201ENST00000584745 83 ntBASIC-1.01□□□□□ -2.57
AP4S1Q9Y587 SNORD38B-202ENST00000625943 69 ntBASIC-1.01□□□□□ -2.57
AP4S1Q9Y587 MIR6828-201ENST00000636181 60 ntBASIC-1.01□□□□□ -2.57
AP4S1Q9Y587 MIR655-201ENST00000362159 97 ntBASIC-1.02□□□□□ -2.57
AP4S1Q9Y587 RNU6-137P-201ENST00000363680 108 ntBASIC-1.02□□□□□ -2.57
AP4S1Q9Y587 Y_RNA.376-201ENST00000365638 108 ntBASIC-1.02□□□□□ -2.57
AP4S1Q9Y587 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-1.02□□□□□ -2.57
AP4S1Q9Y587 RPL23AP30-201ENST00000432419 501 ntBASIC-1.02□□□□□ -2.57
AP4S1Q9Y587 AC004386.2-201ENST00000441858 148 ntBASIC-1.02□□□□□ -2.57
AP4S1Q9Y587 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-1.02□□□□□ -2.57
AP4S1Q9Y587 PAXBP1P1-201ENST00000449315 447 ntBASIC-1.02□□□□□ -2.57
AP4S1Q9Y587 PCNPP5-201ENST00000452246 481 ntBASIC-1.02□□□□□ -2.57
AP4S1Q9Y587 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-1.02□□□□□ -2.57
AP4S1Q9Y587 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-1.02□□□□□ -2.57
AP4S1Q9Y587 AC090617.3-201ENST00000573670 475 ntBASIC-1.02□□□□□ -2.57
AP4S1Q9Y587 AL590491.3-201ENST00000610731 82 ntBASIC-1.02□□□□□ -2.57
AP4S1Q9Y587 FAM157A-202ENST00000615155 405 ntBASIC-1.02□□□□□ -2.57
AP4S1Q9Y587 FRG1KP-201ENST00000623592 341 ntBASIC-1.02□□□□□ -2.57
AP4S1Q9Y587 snoZ196.1-201ENST00000625269 89 ntBASIC-1.02□□□□□ -2.57
AP4S1Q9Y587 RNU6-511P-201ENST00000363496 107 ntBASIC-1.03□□□□□ -2.57
AP4S1Q9Y587 SNORD14.1-201ENST00000365609 90 ntBASIC-1.03□□□□□ -2.57
AP4S1Q9Y587 MIR802-201ENST00000390235 94 ntBASIC-1.03□□□□□ -2.57
AP4S1Q9Y587 RNU6-1093P-201ENST00000391194 107 ntBASIC-1.03□□□□□ -2.57
AP4S1Q9Y587 RNU6-735P-201ENST00000410612 107 ntBASIC-1.03□□□□□ -2.57
AP4S1Q9Y587 RN7SKP142-201ENST00000411236 328 ntBASIC-1.03□□□□□ -2.57
AP4S1Q9Y587 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-1.03□□□□□ -2.57
AP4S1Q9Y587 AC008134.1-201ENST00000420943 193 ntBASIC-1.03□□□□□ -2.57
AP4S1Q9Y587 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-1.03□□□□□ -2.57
AP4S1Q9Y587 BTF3P11-201ENST00000426582 477 ntBASIC-1.03□□□□□ -2.57
AP4S1Q9Y587 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-1.03□□□□□ -2.57
AP4S1Q9Y587 SUMO1P3-201ENST00000439961 304 ntBASIC-1.03□□□□□ -2.57
AP4S1Q9Y587 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-1.03□□□□□ -2.57
AP4S1Q9Y587 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC-1.03□□□□□ -2.57
AP4S1Q9Y587 RNU6-221P-201ENST00000459541 99 ntBASIC-1.03□□□□□ -2.57
AP4S1Q9Y587 AC116562.3-201ENST00000506136 177 ntBASIC-1.03□□□□□ -2.57
AP4S1Q9Y587 RNU6-567P-201ENST00000516746 107 ntBASIC-1.03□□□□□ -2.57
AP4S1Q9Y587 MIR4493-201ENST00000584016 73 ntBASIC-1.03□□□□□ -2.57
AP4S1Q9Y587 MIR3925-201ENST00000584674 77 ntBASIC-1.03□□□□□ -2.57
AP4S1Q9Y587 AL596327.1-201ENST00000603629 213 ntBASIC-1.03□□□□□ -2.57
AP4S1Q9Y587 AL139022.2-201ENST00000606934 443 ntBASIC-1.03□□□□□ -2.57
AP4S1Q9Y587 AC023158.2-201ENST00000614876 543 ntBASIC-1.03□□□□□ -2.57
AP4S1Q9Y587 AC005562.2-201ENST00000618264 111 ntBASIC-1.03□□□□□ -2.57
AP4S1Q9Y587 SCARNA4-201ENST00000629045 128 ntBASIC-1.03□□□□□ -2.57
AP4S1Q9Y587 RNU6-1305P-201ENST00000364353 104 ntBASIC-1.04□□□□□ -2.58
AP4S1Q9Y587 RNU6-811P-201ENST00000384069 107 ntBASIC-1.04□□□□□ -2.58
AP4S1Q9Y587 Y_RNA.477-201ENST00000384352 108 ntBASIC-1.04□□□□□ -2.58
AP4S1Q9Y587 MIR329-1-201ENST00000385028 80 ntBASIC-1.04□□□□□ -2.58
AP4S1Q9Y587 MIR586-201ENST00000385035 97 ntBASIC-1.04□□□□□ -2.58
AP4S1Q9Y587 MIR563-201ENST00000385080 79 ntBASIC-1.04□□□□□ -2.58
AP4S1Q9Y587 AL953862.1-201ENST00000423016 168 ntBASIC-1.04□□□□□ -2.58
AP4S1Q9Y587 MTCO2P23-201ENST00000425216 680 ntBASIC-1.04□□□□□ -2.58
AP4S1Q9Y587 RNU7-43P-201ENST00000516554 64 ntBASIC-1.04□□□□□ -2.58
AP4S1Q9Y587 AC007751.1-201ENST00000529260 376 ntBASIC-1.04□□□□□ -2.58
AP4S1Q9Y587 CR383656.4-201ENST00000546909 122 ntBASIC-1.04□□□□□ -2.58
AP4S1Q9Y587 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-1.04□□□□□ -2.58
AP4S1Q9Y587 MIR5006-201ENST00000583027 110 ntBASIC-1.04□□□□□ -2.58
AP4S1Q9Y587 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-1.04□□□□□ -2.58
AP4S1Q9Y587 MIR6779-201ENST00000617283 64 ntBASIC-1.04□□□□□ -2.58
AP4S1Q9Y587 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC-1.04□□□□□ -2.58
AP4S1Q9Y587 MIR4251-201ENST00000635819 61 ntBASIC-1.04□□□□□ -2.58
AP4S1Q9Y587 MIR377-201ENST00000362145 69 ntBASIC-1.05□□□□□ -2.58
AP4S1Q9Y587 SNORA1B-201ENST00000362535 133 ntBASIC-1.05□□□□□ -2.58
AP4S1Q9Y587 RNU6-960P-201ENST00000364056 120 ntBASIC-1.05□□□□□ -2.58
AP4S1Q9Y587 RNU6-336P-201ENST00000364891 107 ntBASIC-1.05□□□□□ -2.58
AP4S1Q9Y587 RNU4-9P-201ENST00000364951 139 ntBASIC-1.05□□□□□ -2.58
AP4S1Q9Y587 MIR516B2-201ENST00000385190 85 ntBASIC-1.05□□□□□ -2.58
AP4S1Q9Y587 MIR1298-201ENST00000408783 112 ntBASIC-1.05□□□□□ -2.58
AP4S1Q9Y587 RPL21P38-201ENST00000418090 167 ntBASIC-1.05□□□□□ -2.58
AP4S1Q9Y587 AL512326.2-201ENST00000426359 151 ntBASIC-1.05□□□□□ -2.58
AP4S1Q9Y587 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-1.05□□□□□ -2.58
AP4S1Q9Y587 AC091951.3-201ENST00000504093 246 ntBASIC-1.05□□□□□ -2.58
AP4S1Q9Y587 RPL21P9-201ENST00000556149 474 ntBASIC-1.05□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms