Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.1□□□□□ -2.07
KDM3AQ9Y4C1 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
KDM3AQ9Y4C1 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KDM3AQ9Y4C1 RNU6-874P-201ENST00000362390 105 ntBASIC2.1□□□□□ -2.07
KDM3AQ9Y4C1 Y_RNA.415-201ENST00000384012 112 ntBASIC2.1□□□□□ -2.07
KDM3AQ9Y4C1 MIR1253-201ENST00000408273 105 ntBASIC2.1□□□□□ -2.07
KDM3AQ9Y4C1 RNU6-57P-201ENST00000411348 103 ntBASIC2.1□□□□□ -2.07
KDM3AQ9Y4C1 AC008134.1-201ENST00000420943 193 ntBASIC2.1□□□□□ -2.07
KDM3AQ9Y4C1 UQCRBP2-201ENST00000447827 297 ntBASIC2.1□□□□□ -2.07
KDM3AQ9Y4C1 RNA5SP57-201ENST00000459463 123 ntBASIC2.1□□□□□ -2.07
KDM3AQ9Y4C1 RPS27P21-201ENST00000486977 252 ntBASIC2.1□□□□□ -2.07
KDM3AQ9Y4C1 AC105758.1-201ENST00000506038 399 ntBASIC2.1□□□□□ -2.07
KDM3AQ9Y4C1 RAB11AP2-201ENST00000545905 639 ntBASIC2.1□□□□□ -2.07
KDM3AQ9Y4C1 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.1□□□□□ -2.07
KDM3AQ9Y4C1 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.1□□□□□ -2.07
KDM3AQ9Y4C1 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.09□□□□□ -2.07
KDM3AQ9Y4C1 RNA5SP276-201ENST00000362580 94 ntBASIC2.09□□□□□ -2.08
KDM3AQ9Y4C1 RNU4-79P-201ENST00000362764 141 ntBASIC2.09□□□□□ -2.08
KDM3AQ9Y4C1 RNU6-1266P-201ENST00000362794 105 ntBASIC2.09□□□□□ -2.08
KDM3AQ9Y4C1 SNORA16B-201ENST00000364674 135 ntBASIC2.09□□□□□ -2.08
KDM3AQ9Y4C1 SNORD87-201ENST00000364849 89 ntBASIC2.09□□□□□ -2.08
KDM3AQ9Y4C1 SNORA67.2-201ENST00000384300 149 ntBASIC2.09□□□□□ -2.08
KDM3AQ9Y4C1 MIR17-201ENST00000385012 84 ntBASIC2.09□□□□□ -2.08
KDM3AQ9Y4C1 SNORA40.18-201ENST00000391200 128 ntBASIC2.09□□□□□ -2.08
KDM3AQ9Y4C1 RNU6-1001P-201ENST00000411265 100 ntBASIC2.09□□□□□ -2.08
KDM3AQ9Y4C1 AL158823.1-201ENST00000418441 478 ntBASIC2.09□□□□□ -2.08
KDM3AQ9Y4C1 AL445685.2-201ENST00000422551 342 ntBASIC2.09□□□□□ -2.08
KDM3AQ9Y4C1 RNU7-152P-201ENST00000458982 64 ntBASIC2.09□□□□□ -2.08
KDM3AQ9Y4C1 AC107393.1-201ENST00000512403 346 ntBASIC2.09□□□□□ -2.08
KDM3AQ9Y4C1 RNU6-1170P-201ENST00000515974 106 ntBASIC2.09□□□□□ -2.08
KDM3AQ9Y4C1 RNA5SP458-201ENST00000516188 119 ntBASIC2.09□□□□□ -2.08
KDM3AQ9Y4C1 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.09□□□□□ -2.08
KDM3AQ9Y4C1 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.09□□□□□ -2.08
KDM3AQ9Y4C1 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.09□□□□□ -2.08
KDM3AQ9Y4C1 MIR340-201ENST00000362125 95 ntBASIC2.08□□□□□ -2.08
KDM3AQ9Y4C1 Y_RNA.604-201ENST00000410574 102 ntBASIC2.08□□□□□ -2.08
KDM3AQ9Y4C1 RNU2-40P-201ENST00000410833 196 ntBASIC2.08□□□□□ -2.08
KDM3AQ9Y4C1 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.08□□□□□ -2.08
KDM3AQ9Y4C1 MTND4P28-201ENST00000426217 387 ntBASIC2.08□□□□□ -2.08
KDM3AQ9Y4C1 RPL23AP6-201ENST00000446637 472 ntBASIC2.08□□□□□ -2.08
KDM3AQ9Y4C1 RNU7-169P-201ENST00000459456 61 ntBASIC2.08□□□□□ -2.08
KDM3AQ9Y4C1 RNU6-699P-201ENST00000517081 110 ntBASIC2.08□□□□□ -2.08
KDM3AQ9Y4C1 SNORD116.3-201ENST00000517176 78 ntBASIC2.08□□□□□ -2.08
KDM3AQ9Y4C1 MIR3683-201ENST00000580847 82 ntBASIC2.08□□□□□ -2.08
KDM3AQ9Y4C1 AC005034.5-201ENST00000604219 466 ntBASIC2.08□□□□□ -2.08
KDM3AQ9Y4C1 SDR42E1P4-201ENST00000620894 481 ntBASIC2.08□□□□□ -2.08
KDM3AQ9Y4C1 AC006001.4-201ENST00000622243 395 ntBASIC2.08□□□□□ -2.08
KDM3AQ9Y4C1 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.08□□□□□ -2.08
KDM3AQ9Y4C1 AL359851.1-201ENST00000569460 4997 ntBASIC2.07□□□□□ -2.08
KDM3AQ9Y4C1 RNU1-17P-201ENST00000363022 152 ntBASIC2.07□□□□□ -2.08
KDM3AQ9Y4C1 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.07□□□□□ -2.08
KDM3AQ9Y4C1 SUMO2P12-201ENST00000405924 140 ntBASIC2.07□□□□□ -2.08
KDM3AQ9Y4C1 Y_RNA.592-201ENST00000410274 109 ntBASIC2.07□□□□□ -2.08
KDM3AQ9Y4C1 AC096920.1-201ENST00000423991 241 ntBASIC2.07□□□□□ -2.08
KDM3AQ9Y4C1 AL353689.1-201ENST00000438895 199 ntBASIC2.07□□□□□ -2.08
KDM3AQ9Y4C1 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.07□□□□□ -2.08
KDM3AQ9Y4C1 RN7SKP49-201ENST00000516675 260 ntBASIC2.07□□□□□ -2.08
KDM3AQ9Y4C1 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.07□□□□□ -2.08
KDM3AQ9Y4C1 MIR4255-201ENST00000579351 72 ntBASIC2.07□□□□□ -2.08
KDM3AQ9Y4C1 AC125232.2-201ENST00000592457 143 ntBASIC2.07□□□□□ -2.08
KDM3AQ9Y4C1 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.07□□□□□ -2.08
KDM3AQ9Y4C1 AL117336.2-201ENST00000602435 335 ntBASIC2.07□□□□□ -2.08
KDM3AQ9Y4C1 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
KDM3AQ9Y4C1 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
KDM3AQ9Y4C1 SNORA16.1-201ENST00000364597 132 ntBASIC2.06□□□□□ -2.08
KDM3AQ9Y4C1 MIR329-1-201ENST00000385028 80 ntBASIC2.06□□□□□ -2.08
KDM3AQ9Y4C1 MIR9-3-201ENST00000385084 90 ntBASIC2.06□□□□□ -2.08
KDM3AQ9Y4C1 MIR559-201ENST00000385188 96 ntBASIC2.06□□□□□ -2.08
KDM3AQ9Y4C1 MIR548B-201ENST00000385247 97 ntBASIC2.06□□□□□ -2.08
KDM3AQ9Y4C1 SNORA48.1-201ENST00000390879 135 ntBASIC2.06□□□□□ -2.08
KDM3AQ9Y4C1 RNA5SP213-201ENST00000391031 106 ntBASIC2.06□□□□□ -2.08
KDM3AQ9Y4C1 RNA5SP212-201ENST00000391223 107 ntBASIC2.06□□□□□ -2.08
KDM3AQ9Y4C1 RNA5SP504-201ENST00000410676 117 ntBASIC2.06□□□□□ -2.08
KDM3AQ9Y4C1 RNA5SP501-201ENST00000410990 112 ntBASIC2.06□□□□□ -2.08
KDM3AQ9Y4C1 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.06□□□□□ -2.08
KDM3AQ9Y4C1 PCNPP5-201ENST00000452246 481 ntBASIC2.06□□□□□ -2.08
KDM3AQ9Y4C1 AC011406.1-201ENST00000512440 370 ntBASIC2.06□□□□□ -2.08
KDM3AQ9Y4C1 AC074133.1-201ENST00000515696 183 ntBASIC2.06□□□□□ -2.08
KDM3AQ9Y4C1 Y_RNA.661-201ENST00000516003 99 ntBASIC2.06□□□□□ -2.08
KDM3AQ9Y4C1 RNU6-976P-201ENST00000516086 111 ntBASIC2.06□□□□□ -2.08
KDM3AQ9Y4C1 RNU6-1041P-201ENST00000516254 102 ntBASIC2.06□□□□□ -2.08
KDM3AQ9Y4C1 RNA5SP364-201ENST00000516938 78 ntBASIC2.06□□□□□ -2.08
KDM3AQ9Y4C1 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.06□□□□□ -2.08
KDM3AQ9Y4C1 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
KDM3AQ9Y4C1 RNU6-1145P-201ENST00000384246 107 ntBASIC2.05□□□□□ -2.08
KDM3AQ9Y4C1 Y_RNA.498-201ENST00000384460 102 ntBASIC2.05□□□□□ -2.08
KDM3AQ9Y4C1 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
KDM3AQ9Y4C1 TOMM22P2-201ENST00000430735 237 ntBASIC2.05□□□□□ -2.08
KDM3AQ9Y4C1 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.05□□□□□ -2.08
KDM3AQ9Y4C1 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.05□□□□□ -2.08
KDM3AQ9Y4C1 RNU6-221P-201ENST00000459541 99 ntBASIC2.05□□□□□ -2.08
KDM3AQ9Y4C1 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.05□□□□□ -2.08
KDM3AQ9Y4C1 AP000942.3-201ENST00000603702 160 ntBASIC2.05□□□□□ -2.08
KDM3AQ9Y4C1 AC087588.2-201ENST00000617667 426 ntBASIC2.05□□□□□ -2.08
KDM3AQ9Y4C1 AL138825.1-201ENST00000618587 192 ntBASIC2.05□□□□□ -2.08
KDM3AQ9Y4C1 uc_338.20-201ENST00000621563 178 ntBASIC2.05□□□□□ -2.08
KDM3AQ9Y4C1 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.05□□□□□ -2.08
KDM3AQ9Y4C1 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
KDM3AQ9Y4C1 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.04□□□□□ -2.08
KDM3AQ9Y4C1 RNA5SP361-201ENST00000362686 118 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms