Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.93□□□□□ -2.56
UBE2D4Q9Y2X8 MTCO3P27-201ENST00000514397 196 ntBASIC-0.93□□□□□ -2.56
UBE2D4Q9Y2X8 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-0.93□□□□□ -2.56
UBE2D4Q9Y2X8 AC090897.1-201ENST00000580909 226 ntBASIC-0.93□□□□□ -2.56
UBE2D4Q9Y2X8 AC008250.2-201ENST00000615261 205 ntBASIC-0.93□□□□□ -2.56
UBE2D4Q9Y2X8 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.94□□□□□ -2.56
UBE2D4Q9Y2X8 RNU6-562P-201ENST00000362731 107 ntBASIC-0.94□□□□□ -2.56
UBE2D4Q9Y2X8 RNU6-1141P-201ENST00000364520 107 ntBASIC-0.94□□□□□ -2.56
UBE2D4Q9Y2X8 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.94□□□□□ -2.56
UBE2D4Q9Y2X8 MIR587-201ENST00000384845 96 ntBASIC-0.94□□□□□ -2.56
UBE2D4Q9Y2X8 RNU6-613P-201ENST00000410412 108 ntBASIC-0.94□□□□□ -2.56
UBE2D4Q9Y2X8 AC244250.2-201ENST00000418731 148 ntBASIC-0.94□□□□□ -2.56
UBE2D4Q9Y2X8 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-0.94□□□□□ -2.56
UBE2D4Q9Y2X8 SUMO1P2-201ENST00000452524 304 ntBASIC-0.94□□□□□ -2.56
UBE2D4Q9Y2X8 U8.21-201ENST00000459536 136 ntBASIC-0.94□□□□□ -2.56
UBE2D4Q9Y2X8 AC010424.1-201ENST00000506336 297 ntBASIC-0.94□□□□□ -2.56
UBE2D4Q9Y2X8 AC093303.1-201ENST00000514549 295 ntBASIC-0.94□□□□□ -2.56
UBE2D4Q9Y2X8 SLC2A13P1-201ENST00000531560 322 ntBASIC-0.94□□□□□ -2.56
UBE2D4Q9Y2X8 CR383656.4-201ENST00000546909 122 ntBASIC-0.94□□□□□ -2.56
UBE2D4Q9Y2X8 MIR4324-201ENST00000584846 72 ntBASIC-0.94□□□□□ -2.56
UBE2D4Q9Y2X8 AC174048.1-201ENST00000603389 144 ntBASIC-0.94□□□□□ -2.56
UBE2D4Q9Y2X8 MIR6738-201ENST00000619620 64 ntBASIC-0.94□□□□□ -2.56
UBE2D4Q9Y2X8 RNU6-384P-201ENST00000364900 104 ntBASIC-0.95□□□□□ -2.56
UBE2D4Q9Y2X8 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.95□□□□□ -2.56
UBE2D4Q9Y2X8 MIR196A1-201ENST00000388006 70 ntBASIC-0.95□□□□□ -2.56
UBE2D4Q9Y2X8 RNA5SP266-201ENST00000410273 108 ntBASIC-0.95□□□□□ -2.56
UBE2D4Q9Y2X8 AL355994.1-201ENST00000424379 260 ntBASIC-0.95□□□□□ -2.56
UBE2D4Q9Y2X8 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.95□□□□□ -2.56
UBE2D4Q9Y2X8 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.95□□□□□ -2.56
UBE2D4Q9Y2X8 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-0.95□□□□□ -2.56
UBE2D4Q9Y2X8 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.95□□□□□ -2.56
UBE2D4Q9Y2X8 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.95□□□□□ -2.56
UBE2D4Q9Y2X8 RNU6-504P-201ENST00000516568 104 ntBASIC-0.95□□□□□ -2.56
UBE2D4Q9Y2X8 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-0.95□□□□□ -2.56
UBE2D4Q9Y2X8 AC012414.2-201ENST00000559474 187 ntBASIC-0.95□□□□□ -2.56
UBE2D4Q9Y2X8 MIR4752-201ENST00000579672 72 ntBASIC-0.95□□□□□ -2.56
UBE2D4Q9Y2X8 MIR3146-201ENST00000580367 79 ntBASIC-0.95□□□□□ -2.56
UBE2D4Q9Y2X8 MIR3925-201ENST00000584674 77 ntBASIC-0.95□□□□□ -2.56
UBE2D4Q9Y2X8 AC008608.1-201ENST00000603910 127 ntBASIC-0.95□□□□□ -2.56
UBE2D4Q9Y2X8 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.95□□□□□ -2.56
UBE2D4Q9Y2X8 MTND5P33-201ENST00000571250 1450 ntBASIC-0.96□□□□□ -2.56
UBE2D4Q9Y2X8 SNORA72.1-201ENST00000363485 129 ntBASIC-0.96□□□□□ -2.56
UBE2D4Q9Y2X8 RNA5SP48-201ENST00000363969 126 ntBASIC-0.96□□□□□ -2.56
UBE2D4Q9Y2X8 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.96□□□□□ -2.56
UBE2D4Q9Y2X8 MIR520C-201ENST00000385005 87 ntBASIC-0.96□□□□□ -2.56
UBE2D4Q9Y2X8 AC092809.3-201ENST00000415453 231 ntBASIC-0.96□□□□□ -2.56
UBE2D4Q9Y2X8 RPL21P38-201ENST00000418090 167 ntBASIC-0.96□□□□□ -2.56
UBE2D4Q9Y2X8 AC078809.1-201ENST00000427601 140 ntBASIC-0.96□□□□□ -2.56
UBE2D4Q9Y2X8 AC010975.2-201ENST00000427781 588 ntBASIC-0.96□□□□□ -2.56
UBE2D4Q9Y2X8 HGF-207ENST00000453018 721 ntTSL 3 BASIC-0.96□□□□□ -2.56
UBE2D4Q9Y2X8 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.96□□□□□ -2.56
UBE2D4Q9Y2X8 RNU7-128P-201ENST00000517247 62 ntBASIC-0.96□□□□□ -2.56
UBE2D4Q9Y2X8 DEFB108A-201ENST00000530110 222 ntBASIC-0.96□□□□□ -2.56
UBE2D4Q9Y2X8 MIR4676-201ENST00000583078 72 ntBASIC-0.96□□□□□ -2.56
UBE2D4Q9Y2X8 AL158042.1-201ENST00000605338 460 ntBASIC-0.96□□□□□ -2.56
UBE2D4Q9Y2X8 AC020891.4-201ENST00000605745 93 ntBASIC-0.96□□□□□ -2.56
UBE2D4Q9Y2X8 FRG1KP-201ENST00000623592 341 ntBASIC-0.96□□□□□ -2.56
UBE2D4Q9Y2X8 AC099654.8-201ENST00000637757 681 ntBASIC-0.96□□□□□ -2.56
UBE2D4Q9Y2X8 MIR148A-201ENST00000362215 68 ntBASIC-0.97□□□□□ -2.56
UBE2D4Q9Y2X8 RNU4-32P-201ENST00000363404 141 ntBASIC-0.97□□□□□ -2.56
UBE2D4Q9Y2X8 RNA5SP205-201ENST00000364653 136 ntBASIC-0.97□□□□□ -2.56
UBE2D4Q9Y2X8 Y_RNA.265-201ENST00000364677 108 ntBASIC-0.97□□□□□ -2.56
UBE2D4Q9Y2X8 RNU6-934P-201ENST00000365154 107 ntBASIC-0.97□□□□□ -2.56
UBE2D4Q9Y2X8 RNU6-10P-201ENST00000384036 107 ntBASIC-0.97□□□□□ -2.56
UBE2D4Q9Y2X8 RNU6-15P-201ENST00000384534 107 ntBASIC-0.97□□□□□ -2.56
UBE2D4Q9Y2X8 MTND3P20-201ENST00000407663 186 ntBASIC-0.97□□□□□ -2.56
UBE2D4Q9Y2X8 RNU6-1186P-201ENST00000410429 97 ntBASIC-0.97□□□□□ -2.56
UBE2D4Q9Y2X8 FCF1P9-201ENST00000412546 282 ntBASIC-0.97□□□□□ -2.56
UBE2D4Q9Y2X8 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC-0.97□□□□□ -2.56
UBE2D4Q9Y2X8 RPS24P1-201ENST00000438550 371 ntBASIC-0.97□□□□□ -2.56
UBE2D4Q9Y2X8 AC022616.3-201ENST00000523940 148 ntBASIC-0.97□□□□□ -2.56
UBE2D4Q9Y2X8 AL139286.2-201ENST00000606838 396 ntBASIC-0.97□□□□□ -2.56
UBE2D4Q9Y2X8 AC009994.1-201ENST00000606889 253 ntBASIC-0.97□□□□□ -2.56
UBE2D4Q9Y2X8 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.97□□□□□ -2.56
UBE2D4Q9Y2X8 MIR6828-201ENST00000636181 60 ntBASIC-0.97□□□□□ -2.56
UBE2D4Q9Y2X8 RNU6-853P-201ENST00000364306 107 ntBASIC-0.98□□□□□ -2.57
UBE2D4Q9Y2X8 RNU5E-7P-201ENST00000365290 117 ntBASIC-0.98□□□□□ -2.57
UBE2D4Q9Y2X8 RNU2-3P-201ENST00000410144 191 ntBASIC-0.98□□□□□ -2.57
UBE2D4Q9Y2X8 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.98□□□□□ -2.57
UBE2D4Q9Y2X8 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-0.98□□□□□ -2.57
UBE2D4Q9Y2X8 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.98□□□□□ -2.57
UBE2D4Q9Y2X8 AC091885.1-201ENST00000506658 268 ntBASIC-0.98□□□□□ -2.57
UBE2D4Q9Y2X8 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.98□□□□□ -2.57
UBE2D4Q9Y2X8 MIR4771-2-201ENST00000577758 74 ntBASIC-0.98□□□□□ -2.57
UBE2D4Q9Y2X8 MIR4771-1-201ENST00000582617 74 ntBASIC-0.98□□□□□ -2.57
UBE2D4Q9Y2X8 MIR548AD-201ENST00000584780 82 ntBASIC-0.98□□□□□ -2.57
UBE2D4Q9Y2X8 AC012433.1-201ENST00000588916 398 ntBASIC-0.98□□□□□ -2.57
UBE2D4Q9Y2X8 AC063944.3-201ENST00000609969 533 ntBASIC-0.98□□□□□ -2.57
UBE2D4Q9Y2X8 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-0.98□□□□□ -2.57
UBE2D4Q9Y2X8 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-0.99□□□□□ -2.57
UBE2D4Q9Y2X8 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.99□□□□□ -2.57
UBE2D4Q9Y2X8 RNU6-190P-201ENST00000384154 102 ntBASIC-0.99□□□□□ -2.57
UBE2D4Q9Y2X8 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.99□□□□□ -2.57
UBE2D4Q9Y2X8 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.99□□□□□ -2.57
UBE2D4Q9Y2X8 MIR873-201ENST00000401120 77 ntBASIC-0.99□□□□□ -2.57
UBE2D4Q9Y2X8 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.99□□□□□ -2.57
UBE2D4Q9Y2X8 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.99□□□□□ -2.57
UBE2D4Q9Y2X8 AL049829.1-201ENST00000465411 156 ntBASIC-0.99□□□□□ -2.57
UBE2D4Q9Y2X8 AC079395.1-201ENST00000510981 262 ntBASIC-0.99□□□□□ -2.57
UBE2D4Q9Y2X8 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.99□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms