Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 MIR8076-201ENST00000611401 83 ntBASIC0.4□□□□□ -2.35
HHLA3Q9XRX5 AL354950.2-201ENST00000617939 290 ntBASIC0.4□□□□□ -2.35
HHLA3Q9XRX5 AC072046.2-201ENST00000618366 268 ntBASIC0.4□□□□□ -2.35
HHLA3Q9XRX5 AC005609.4-201ENST00000625071 447 ntBASIC0.4□□□□□ -2.35
HHLA3Q9XRX5 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
HHLA3Q9XRX5 RNU6-137P-201ENST00000363680 108 ntBASIC0.39□□□□□ -2.35
HHLA3Q9XRX5 Y_RNA.224-201ENST00000364308 111 ntBASIC0.39□□□□□ -2.35
HHLA3Q9XRX5 RNU6-245P-201ENST00000384020 107 ntBASIC0.39□□□□□ -2.35
HHLA3Q9XRX5 SNORD116-13-201ENST00000384408 92 ntBASIC0.39□□□□□ -2.35
HHLA3Q9XRX5 MIR521-1-201ENST00000384902 87 ntBASIC0.39□□□□□ -2.35
HHLA3Q9XRX5 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.39□□□□□ -2.35
HHLA3Q9XRX5 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.39□□□□□ -2.35
HHLA3Q9XRX5 RPL39P39-201ENST00000455840 151 ntBASIC0.39□□□□□ -2.35
HHLA3Q9XRX5 RNU7-90P-201ENST00000459216 62 ntBASIC0.39□□□□□ -2.35
HHLA3Q9XRX5 RNU7-94P-201ENST00000459576 63 ntBASIC0.39□□□□□ -2.35
HHLA3Q9XRX5 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.39□□□□□ -2.35
HHLA3Q9XRX5 Y_RNA.676-201ENST00000516393 96 ntBASIC0.39□□□□□ -2.35
HHLA3Q9XRX5 MIR151B-201ENST00000584249 96 ntBASIC0.39□□□□□ -2.35
HHLA3Q9XRX5 AC004223.2-201ENST00000590309 544 ntBASIC0.39□□□□□ -2.35
HHLA3Q9XRX5 AC092747.3-201ENST00000603769 301 ntBASIC0.39□□□□□ -2.35
HHLA3Q9XRX5 AL357078.3-201ENST00000607528 618 ntBASIC0.39□□□□□ -2.35
HHLA3Q9XRX5 AL096861.1-201ENST00000610899 123 ntBASIC0.39□□□□□ -2.35
HHLA3Q9XRX5 CASC19-280ENST00000642102 1351 ntBASIC0.38□□□□□ -2.35
HHLA3Q9XRX5 U3.8-201ENST00000363675 217 ntBASIC0.38□□□□□ -2.35
HHLA3Q9XRX5 RNU6-82P-201ENST00000363970 107 ntBASIC0.38□□□□□ -2.35
HHLA3Q9XRX5 Y_RNA.378-201ENST00000365652 113 ntBASIC0.38□□□□□ -2.35
HHLA3Q9XRX5 RNU6-110P-201ENST00000384508 104 ntBASIC0.38□□□□□ -2.35
HHLA3Q9XRX5 RNY3P9-201ENST00000384727 106 ntBASIC0.38□□□□□ -2.35
HHLA3Q9XRX5 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.38□□□□□ -2.35
HHLA3Q9XRX5 AL445567.1-201ENST00000439121 144 ntBASIC0.38□□□□□ -2.35
HHLA3Q9XRX5 AL359672.1-201ENST00000442302 409 ntBASIC0.38□□□□□ -2.35
HHLA3Q9XRX5 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.38□□□□□ -2.35
HHLA3Q9XRX5 ZNF736P8Y-201ENST00000451913 669 ntBASIC0.38□□□□□ -2.35
HHLA3Q9XRX5 NDUFB4P10-201ENST00000452541 359 ntBASIC0.38□□□□□ -2.35
HHLA3Q9XRX5 OR9P1P-201ENST00000496431 281 ntBASIC0.38□□□□□ -2.35
HHLA3Q9XRX5 RNA5SP54-201ENST00000516951 92 ntBASIC0.38□□□□□ -2.35
HHLA3Q9XRX5 MTCO2P4-201ENST00000517968 247 ntBASIC0.38□□□□□ -2.35
HHLA3Q9XRX5 AC027419.1-201ENST00000522976 328 ntBASIC0.38□□□□□ -2.35
HHLA3Q9XRX5 MIR5000-201ENST00000577717 103 ntBASIC0.38□□□□□ -2.35
HHLA3Q9XRX5 MIR4714-201ENST00000580728 77 ntBASIC0.38□□□□□ -2.35
HHLA3Q9XRX5 MIR4438-201ENST00000585271 93 ntBASIC0.38□□□□□ -2.35
HHLA3Q9XRX5 SNORA28-201ENST00000606769 126 ntBASIC0.38□□□□□ -2.35
HHLA3Q9XRX5 AC004832.4-201ENST00000608952 331 ntBASIC0.38□□□□□ -2.35
HHLA3Q9XRX5 AC017083.3-201ENST00000609955 700 ntBASIC0.38□□□□□ -2.35
HHLA3Q9XRX5 AC027514.1-201ENST00000588561 1603 ntBASIC0.38□□□□□ -2.35
HHLA3Q9XRX5 RNA5SP347-201ENST00000362445 119 ntBASIC0.37□□□□□ -2.35
HHLA3Q9XRX5 SNORD50.1-201ENST00000362987 71 ntBASIC0.37□□□□□ -2.35
HHLA3Q9XRX5 SNORD115-8-201ENST00000363856 82 ntBASIC0.37□□□□□ -2.35
HHLA3Q9XRX5 SNORD115-38-201ENST00000365037 82 ntBASIC0.37□□□□□ -2.35
HHLA3Q9XRX5 Y_RNA.415-201ENST00000384012 112 ntBASIC0.37□□□□□ -2.35
HHLA3Q9XRX5 RNU5A-2P-201ENST00000384337 116 ntBASIC0.37□□□□□ -2.35
HHLA3Q9XRX5 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.37□□□□□ -2.35
HHLA3Q9XRX5 AL353193.1-201ENST00000421444 268 ntBASIC0.37□□□□□ -2.35
HHLA3Q9XRX5 Z82188.1-201ENST00000436709 154 ntBASIC0.37□□□□□ -2.35
HHLA3Q9XRX5 MTCO2P16-201ENST00000436962 677 ntBASIC0.37□□□□□ -2.35
HHLA3Q9XRX5 AC104332.1-201ENST00000440471 797 ntBASIC0.37□□□□□ -2.35
HHLA3Q9XRX5 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.37□□□□□ -2.35
HHLA3Q9XRX5 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.37□□□□□ -2.35
HHLA3Q9XRX5 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.37□□□□□ -2.35
HHLA3Q9XRX5 AC245047.8-201ENST00000456455 284 ntBASIC0.37□□□□□ -2.35
HHLA3Q9XRX5 SNORD65B-201ENST00000459126 73 ntBASIC0.37□□□□□ -2.35
HHLA3Q9XRX5 AC098869.1-201ENST00000481627 292 ntBASIC0.37□□□□□ -2.35
HHLA3Q9XRX5 RNA5SP121-201ENST00000516537 101 ntBASIC0.37□□□□□ -2.35
HHLA3Q9XRX5 RNU6-58P-201ENST00000517143 103 ntBASIC0.37□□□□□ -2.35
HHLA3Q9XRX5 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.37□□□□□ -2.35
HHLA3Q9XRX5 AC007834.2-201ENST00000536310 343 ntBASIC0.37□□□□□ -2.35
HHLA3Q9XRX5 AC023157.2-201ENST00000540596 141 ntBASIC0.37□□□□□ -2.35
HHLA3Q9XRX5 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.37□□□□□ -2.35
HHLA3Q9XRX5 AL117336.2-201ENST00000602435 335 ntBASIC0.37□□□□□ -2.35
HHLA3Q9XRX5 Z94722.1-201ENST00000604328 474 ntBASIC0.37□□□□□ -2.35
HHLA3Q9XRX5 AL391903.3-201ENST00000612158 163 ntBASIC0.37□□□□□ -2.35
HHLA3Q9XRX5 MIR6079-201ENST00000635807 62 ntBASIC0.37□□□□□ -2.35
HHLA3Q9XRX5 MTND4P12-201ENST00000498999 1377 ntBASIC0.36□□□□□ -2.35
HHLA3Q9XRX5 AC005592.1-201ENST00000566527 1640 ntBASIC0.36□□□□□ -2.35
HHLA3Q9XRX5 RNU6-1266P-201ENST00000362794 105 ntBASIC0.36□□□□□ -2.35
HHLA3Q9XRX5 RNU6-727P-201ENST00000363592 107 ntBASIC0.36□□□□□ -2.35
HHLA3Q9XRX5 Y_RNA.265-201ENST00000364677 108 ntBASIC0.36□□□□□ -2.35
HHLA3Q9XRX5 RNU6-38P-201ENST00000384085 107 ntBASIC0.36□□□□□ -2.35
HHLA3Q9XRX5 MTCO2P19-201ENST00000427513 598 ntBASIC0.36□□□□□ -2.35
HHLA3Q9XRX5 MRPS10P2-201ENST00000431226 381 ntBASIC0.36□□□□□ -2.35
HHLA3Q9XRX5 MRPS10P1-201ENST00000448483 130 ntBASIC0.36□□□□□ -2.35
HHLA3Q9XRX5 MTND1P27-201ENST00000451117 902 ntBASIC0.36□□□□□ -2.35
HHLA3Q9XRX5 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.36□□□□□ -2.35
HHLA3Q9XRX5 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.36□□□□□ -2.35
HHLA3Q9XRX5 AC113410.1-201ENST00000505029 247 ntBASIC0.36□□□□□ -2.35
HHLA3Q9XRX5 RNU7-12P-201ENST00000516030 62 ntBASIC0.36□□□□□ -2.35
HHLA3Q9XRX5 RNA5SP220-201ENST00000516298 104 ntBASIC0.36□□□□□ -2.35
HHLA3Q9XRX5 RNU4-54P-201ENST00000516428 129 ntBASIC0.36□□□□□ -2.35
HHLA3Q9XRX5 SNORA25.14-201ENST00000516481 132 ntBASIC0.36□□□□□ -2.35
HHLA3Q9XRX5 RNU6-1223P-201ENST00000517124 104 ntBASIC0.36□□□□□ -2.35
HHLA3Q9XRX5 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.36□□□□□ -2.35
HHLA3Q9XRX5 AC040904.1-201ENST00000590850 223 ntBASIC0.36□□□□□ -2.35
HHLA3Q9XRX5 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.36□□□□□ -2.35
HHLA3Q9XRX5 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.36□□□□□ -2.35
HHLA3Q9XRX5 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
HHLA3Q9XRX5 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
HHLA3Q9XRX5 MIRLET7C-201ENST00000362160 84 ntBASIC0.35□□□□□ -2.35
HHLA3Q9XRX5 SNORD18A-201ENST00000363753 72 ntBASIC0.35□□□□□ -2.35
HHLA3Q9XRX5 RNU6-873P-201ENST00000363833 107 ntBASIC0.35□□□□□ -2.35
HHLA3Q9XRX5 RNU5A-6P-201ENST00000384136 116 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms