Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AL596028.1-201ENST00000326971 197 ntBASIC3.34□□□□□ -1.87
CDK11AQ9UQ88 RNU6-708P-201ENST00000384217 107 ntBASIC3.34□□□□□ -1.87
CDK11AQ9UQ88 RNU6-318P-201ENST00000384283 103 ntBASIC3.34□□□□□ -1.87
CDK11AQ9UQ88 Y_RNA.471-201ENST00000384312 102 ntBASIC3.34□□□□□ -1.87
CDK11AQ9UQ88 HMGN2P39-201ENST00000398005 273 ntBASIC3.34□□□□□ -1.87
CDK11AQ9UQ88 SNORD12B-201ENST00000410433 91 ntBASIC3.34□□□□□ -1.87
CDK11AQ9UQ88 AL137159.1-201ENST00000452808 512 ntBASIC3.34□□□□□ -1.87
CDK11AQ9UQ88 RNU6-295P-201ENST00000516901 104 ntBASIC3.34□□□□□ -1.87
CDK11AQ9UQ88 IGLV3-17-201ENST00000519099 244 ntBASIC3.34□□□□□ -1.87
CDK11AQ9UQ88 AC121758.2-201ENST00000553271 193 ntBASIC3.34□□□□□ -1.87
CDK11AQ9UQ88 AC233702.2-202ENST00000562547 291 ntBASIC3.34□□□□□ -1.87
CDK11AQ9UQ88 U6.92-201ENST00000636464 89 ntBASIC3.34□□□□□ -1.87
CDK11AQ9UQ88 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.34□□□□□ -1.87
CDK11AQ9UQ88 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
CDK11AQ9UQ88 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDK11AQ9UQ88 RNA5SP361-201ENST00000362686 118 ntBASIC3.33□□□□□ -1.88
CDK11AQ9UQ88 RNU6-234P-201ENST00000365229 104 ntBASIC3.33□□□□□ -1.88
CDK11AQ9UQ88 PCNPP5-201ENST00000452246 481 ntBASIC3.33□□□□□ -1.88
CDK11AQ9UQ88 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.33□□□□□ -1.88
CDK11AQ9UQ88 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.33□□□□□ -1.88
CDK11AQ9UQ88 RNU6-1012P-201ENST00000516606 109 ntBASIC3.33□□□□□ -1.88
CDK11AQ9UQ88 Y_RNA.772-201ENST00000606692 102 ntBASIC3.33□□□□□ -1.88
CDK11AQ9UQ88 AL021879.1-201ENST00000611756 288 ntBASIC3.33□□□□□ -1.88
CDK11AQ9UQ88 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDK11AQ9UQ88 SNORA16B-201ENST00000364674 135 ntBASIC3.32□□□□□ -1.88
CDK11AQ9UQ88 RNU6-611P-201ENST00000384276 104 ntBASIC3.32□□□□□ -1.88
CDK11AQ9UQ88 RNU6-1026P-201ENST00000384465 108 ntBASIC3.32□□□□□ -1.88
CDK11AQ9UQ88 MRPL35P1-201ENST00000404272 572 ntBASIC3.32□□□□□ -1.88
CDK11AQ9UQ88 AC074133.1-201ENST00000515696 183 ntBASIC3.32□□□□□ -1.88
CDK11AQ9UQ88 AC010205.1-201ENST00000616668 449 ntBASIC3.32□□□□□ -1.88
CDK11AQ9UQ88 AL078596.1-201ENST00000624856 447 ntBASIC3.32□□□□□ -1.88
CDK11AQ9UQ88 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
CDK11AQ9UQ88 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CDK11AQ9UQ88 AL033519.2-201ENST00000403958 392 ntBASIC3.31□□□□□ -1.88
CDK11AQ9UQ88 AC073910.1-201ENST00000445047 438 ntBASIC3.31□□□□□ -1.88
CDK11AQ9UQ88 AC091179.3-201ENST00000474761 144 ntBASIC3.31□□□□□ -1.88
CDK11AQ9UQ88 AC010469.2-201ENST00000496412 480 ntBASIC3.31□□□□□ -1.88
CDK11AQ9UQ88 RNU6-1098P-201ENST00000516772 96 ntBASIC3.31□□□□□ -1.88
CDK11AQ9UQ88 DEFB131C-201ENST00000528817 165 ntBASIC3.31□□□□□ -1.88
CDK11AQ9UQ88 MIR4659A-201ENST00000580269 81 ntBASIC3.31□□□□□ -1.88
CDK11AQ9UQ88 MZT1P2-201ENST00000604387 248 ntBASIC3.31□□□□□ -1.88
CDK11AQ9UQ88 AC022202.1-201ENST00000613515 211 ntBASIC3.31□□□□□ -1.88
CDK11AQ9UQ88 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDK11AQ9UQ88 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDK11AQ9UQ88 Y_RNA.439-201ENST00000384119 94 ntBASIC3.3□□□□□ -1.88
CDK11AQ9UQ88 Y_RNA.458-201ENST00000384240 102 ntBASIC3.3□□□□□ -1.88
CDK11AQ9UQ88 MIR300-201ENST00000401138 83 ntBASIC3.3□□□□□ -1.88
CDK11AQ9UQ88 AL357139.1-201ENST00000407792 426 ntBASIC3.3□□□□□ -1.88
CDK11AQ9UQ88 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.3□□□□□ -1.88
CDK11AQ9UQ88 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.3□□□□□ -1.88
CDK11AQ9UQ88 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.3□□□□□ -1.88
CDK11AQ9UQ88 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.3□□□□□ -1.88
CDK11AQ9UQ88 UQCRBP2-201ENST00000447827 297 ntBASIC3.3□□□□□ -1.88
CDK11AQ9UQ88 RNU7-14P-201ENST00000459331 62 ntBASIC3.3□□□□□ -1.88
CDK11AQ9UQ88 MIR449C-201ENST00000516047 92 ntBASIC3.3□□□□□ -1.88
CDK11AQ9UQ88 AC131281.1-201ENST00000522984 164 ntBASIC3.3□□□□□ -1.88
CDK11AQ9UQ88 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.3□□□□□ -1.88
CDK11AQ9UQ88 MIR6840-201ENST00000611937 71 ntBASIC3.3□□□□□ -1.88
CDK11AQ9UQ88 AC240442.1-201ENST00000616055 283 ntBASIC3.3□□□□□ -1.88
CDK11AQ9UQ88 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
CDK11AQ9UQ88 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.29□□□□□ -1.88
CDK11AQ9UQ88 RNU2-2P-201ENST00000410396 191 ntBASIC3.29□□□□□ -1.88
CDK11AQ9UQ88 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.29□□□□□ -1.88
CDK11AQ9UQ88 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.29□□□□□ -1.88
CDK11AQ9UQ88 RPEP5-201ENST00000441137 268 ntBASIC3.29□□□□□ -1.88
CDK11AQ9UQ88 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.29□□□□□ -1.88
CDK11AQ9UQ88 AC067942.3-201ENST00000512025 362 ntBASIC3.29□□□□□ -1.88
CDK11AQ9UQ88 RNA5SP458-201ENST00000516188 119 ntBASIC3.29□□□□□ -1.88
CDK11AQ9UQ88 RNU6-965P-201ENST00000516721 96 ntBASIC3.29□□□□□ -1.88
CDK11AQ9UQ88 MIR4287-201ENST00000579398 78 ntBASIC3.29□□□□□ -1.88
CDK11AQ9UQ88 AL162730.1-201ENST00000605734 292 ntBASIC3.29□□□□□ -1.88
CDK11AQ9UQ88 U2.15-201ENST00000611544 191 ntBASIC3.29□□□□□ -1.88
CDK11AQ9UQ88 U2.16-201ENST00000613119 191 ntBASIC3.29□□□□□ -1.88
CDK11AQ9UQ88 U2.12-201ENST00000613778 191 ntBASIC3.29□□□□□ -1.88
CDK11AQ9UQ88 U2.20-201ENST00000613956 192 ntBASIC3.29□□□□□ -1.88
CDK11AQ9UQ88 U2.9-201ENST00000615427 191 ntBASIC3.29□□□□□ -1.88
CDK11AQ9UQ88 U2.11-201ENST00000616345 191 ntBASIC3.29□□□□□ -1.88
CDK11AQ9UQ88 U2.2-201ENST00000616535 191 ntBASIC3.29□□□□□ -1.88
CDK11AQ9UQ88 U2.3-201ENST00000617785 191 ntBASIC3.29□□□□□ -1.88
CDK11AQ9UQ88 U2.19-201ENST00000618602 191 ntBASIC3.29□□□□□ -1.88
CDK11AQ9UQ88 RNU2-1-201ENST00000618664 191 ntBASIC3.29□□□□□ -1.88
CDK11AQ9UQ88 U2.6-201ENST00000619225 191 ntBASIC3.29□□□□□ -1.88
CDK11AQ9UQ88 U2.5-201ENST00000619465 191 ntBASIC3.29□□□□□ -1.88
CDK11AQ9UQ88 U2.10-201ENST00000620268 191 ntBASIC3.29□□□□□ -1.88
CDK11AQ9UQ88 AC068205.3-201ENST00000636385 468 ntBASIC3.29□□□□□ -1.88
CDK11AQ9UQ88 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CDK11AQ9UQ88 Y_RNA.153-201ENST00000363615 91 ntBASIC3.28□□□□□ -1.88
CDK11AQ9UQ88 RNU1-51P-201ENST00000365345 176 ntBASIC3.28□□□□□ -1.88
CDK11AQ9UQ88 RNU6-926P-201ENST00000384075 107 ntBASIC3.28□□□□□ -1.88
CDK11AQ9UQ88 SNORA80E-201ENST00000384744 137 ntBASIC3.28□□□□□ -1.88
CDK11AQ9UQ88 MIR17-201ENST00000385012 84 ntBASIC3.28□□□□□ -1.88
CDK11AQ9UQ88 AC245102.2-201ENST00000448956 180 ntBASIC3.28□□□□□ -1.88
CDK11AQ9UQ88 SNORA40.9-201ENST00000515895 93 ntBASIC3.28□□□□□ -1.88
CDK11AQ9UQ88 RNU6-1143P-201ENST00000516125 104 ntBASIC3.28□□□□□ -1.88
CDK11AQ9UQ88 SNORA40.15-201ENST00000516884 107 ntBASIC3.28□□□□□ -1.88
CDK11AQ9UQ88 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.28□□□□□ -1.88
CDK11AQ9UQ88 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.28□□□□□ -1.88
CDK11AQ9UQ88 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CDK11AQ9UQ88 RNU6-727P-201ENST00000363592 107 ntBASIC3.27□□□□□ -1.89
CDK11AQ9UQ88 Y_RNA.276-201ENST00000364732 109 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms