Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 Y_RNA.561-201ENST00000384694 100 ntBASIC1.36□□□□□ -2.19
UBQLN1Q9UMX0 MIR10B-201ENST00000385011 110 ntBASIC1.36□□□□□ -2.19
UBQLN1Q9UMX0 MIR548F5-201ENST00000408421 86 ntBASIC1.36□□□□□ -2.19
UBQLN1Q9UMX0 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.36□□□□□ -2.19
UBQLN1Q9UMX0 AC074085.1-201ENST00000413598 418 ntBASIC1.36□□□□□ -2.19
UBQLN1Q9UMX0 MTCO3P29-201ENST00000432119 779 ntBASIC1.36□□□□□ -2.19
UBQLN1Q9UMX0 NDUFB4P10-201ENST00000452541 359 ntBASIC1.36□□□□□ -2.19
UBQLN1Q9UMX0 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.36□□□□□ -2.19
UBQLN1Q9UMX0 AC005908.1-201ENST00000468701 347 ntBASIC1.36□□□□□ -2.19
UBQLN1Q9UMX0 RPL36AP21-201ENST00000490372 323 ntBASIC1.36□□□□□ -2.19
UBQLN1Q9UMX0 RNU7-175P-201ENST00000515915 61 ntBASIC1.36□□□□□ -2.19
UBQLN1Q9UMX0 CBX3P8-201ENST00000532412 525 ntBASIC1.36□□□□□ -2.19
UBQLN1Q9UMX0 AC073413.2-201ENST00000604332 360 ntBASIC1.36□□□□□ -2.19
UBQLN1Q9UMX0 SNORD11B-201ENST00000607707 90 ntBASIC1.36□□□□□ -2.19
UBQLN1Q9UMX0 MIR6078-201ENST00000611069 100 ntBASIC1.36□□□□□ -2.19
UBQLN1Q9UMX0 MIR8070-201ENST00000616510 88 ntBASIC1.36□□□□□ -2.19
UBQLN1Q9UMX0 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
UBQLN1Q9UMX0 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.36□□□□□ -2.19
UBQLN1Q9UMX0 CASC19-280ENST00000642102 1351 ntBASIC1.35□□□□□ -2.19
UBQLN1Q9UMX0 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.35□□□□□ -2.19
UBQLN1Q9UMX0 Y_RNA.118-201ENST00000363300 101 ntBASIC1.35□□□□□ -2.19
UBQLN1Q9UMX0 RNU1-96P-201ENST00000364163 162 ntBASIC1.35□□□□□ -2.19
UBQLN1Q9UMX0 SNORA63D-201ENST00000364359 132 ntBASIC1.35□□□□□ -2.19
UBQLN1Q9UMX0 RNU6-1019P-201ENST00000364424 107 ntBASIC1.35□□□□□ -2.19
UBQLN1Q9UMX0 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
UBQLN1Q9UMX0 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
UBQLN1Q9UMX0 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
UBQLN1Q9UMX0 Y_RNA.594-201ENST00000410373 140 ntBASIC1.35□□□□□ -2.19
UBQLN1Q9UMX0 AC016909.1-201ENST00000415916 166 ntBASIC1.35□□□□□ -2.19
UBQLN1Q9UMX0 CST2P1-201ENST00000425770 87 ntBASIC1.35□□□□□ -2.19
UBQLN1Q9UMX0 MTND1P2-201ENST00000430604 821 ntBASIC1.35□□□□□ -2.19
UBQLN1Q9UMX0 RPS3AP52-201ENST00000435639 297 ntBASIC1.35□□□□□ -2.19
UBQLN1Q9UMX0 AC074290.1-201ENST00000448883 135 ntBASIC1.35□□□□□ -2.19
UBQLN1Q9UMX0 RNU7-57P-201ENST00000459540 60 ntBASIC1.35□□□□□ -2.19
UBQLN1Q9UMX0 AP000870.1-201ENST00000472927 406 ntBASIC1.35□□□□□ -2.19
UBQLN1Q9UMX0 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.35□□□□□ -2.19
UBQLN1Q9UMX0 Y_RNA.670-201ENST00000516255 105 ntBASIC1.35□□□□□ -2.19
UBQLN1Q9UMX0 SNORA25.14-201ENST00000516481 132 ntBASIC1.35□□□□□ -2.19
UBQLN1Q9UMX0 RNU1-117P-201ENST00000517041 158 ntBASIC1.35□□□□□ -2.19
UBQLN1Q9UMX0 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.35□□□□□ -2.19
UBQLN1Q9UMX0 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.35□□□□□ -2.19
UBQLN1Q9UMX0 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.35□□□□□ -2.19
UBQLN1Q9UMX0 UBL5P4-201ENST00000562584 236 ntBASIC1.35□□□□□ -2.19
UBQLN1Q9UMX0 AC068338.1-201ENST00000565567 176 ntBASIC1.35□□□□□ -2.19
UBQLN1Q9UMX0 7SK.7-201ENST00000603504 247 ntBASIC1.35□□□□□ -2.19
UBQLN1Q9UMX0 AC069114.2-201ENST00000604699 304 ntBASIC1.35□□□□□ -2.19
UBQLN1Q9UMX0 AC005014.2-201ENST00000607795 599 ntBASIC1.35□□□□□ -2.19
UBQLN1Q9UMX0 MIR8074-201ENST00000615081 81 ntBASIC1.35□□□□□ -2.19
UBQLN1Q9UMX0 AC126177.8-201ENST00000618339 1015 ntBASIC1.35□□□□□ -2.19
UBQLN1Q9UMX0 AL078596.1-201ENST00000624856 447 ntBASIC1.35□□□□□ -2.19
UBQLN1Q9UMX0 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.35□□□□□ -2.19
UBQLN1Q9UMX0 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.35□□□□□ -2.19
UBQLN1Q9UMX0 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
UBQLN1Q9UMX0 snoU2-30.2-201ENST00000362805 70 ntBASIC1.34□□□□□ -2.19
UBQLN1Q9UMX0 Y_RNA.166-201ENST00000363730 102 ntBASIC1.34□□□□□ -2.19
UBQLN1Q9UMX0 Y_RNA.184-201ENST00000363884 108 ntBASIC1.34□□□□□ -2.19
UBQLN1Q9UMX0 RNU6-280P-201ENST00000364145 104 ntBASIC1.34□□□□□ -2.19
UBQLN1Q9UMX0 RNU6-767P-201ENST00000384132 107 ntBASIC1.34□□□□□ -2.19
UBQLN1Q9UMX0 Y_RNA.473-201ENST00000384333 102 ntBASIC1.34□□□□□ -2.19
UBQLN1Q9UMX0 MIR548B-201ENST00000385247 97 ntBASIC1.34□□□□□ -2.19
UBQLN1Q9UMX0 RNU1-139P-201ENST00000391307 165 ntBASIC1.34□□□□□ -2.19
UBQLN1Q9UMX0 RNU6-1050P-201ENST00000410388 107 ntBASIC1.34□□□□□ -2.19
UBQLN1Q9UMX0 MTND3P23-201ENST00000431980 347 ntBASIC1.34□□□□□ -2.19
UBQLN1Q9UMX0 HMGN2P34-201ENST00000437647 269 ntBASIC1.34□□□□□ -2.19
UBQLN1Q9UMX0 RPS29P29-201ENST00000456396 171 ntBASIC1.34□□□□□ -2.19
UBQLN1Q9UMX0 RNU6-221P-201ENST00000459541 99 ntBASIC1.34□□□□□ -2.19
UBQLN1Q9UMX0 AC091179.3-201ENST00000474761 144 ntBASIC1.34□□□□□ -2.19
UBQLN1Q9UMX0 RNU7-30P-201ENST00000516835 62 ntBASIC1.34□□□□□ -2.19
UBQLN1Q9UMX0 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.34□□□□□ -2.19
UBQLN1Q9UMX0 AL355802.3-201ENST00000607571 545 ntBASIC1.34□□□□□ -2.19
UBQLN1Q9UMX0 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.34□□□□□ -2.19
UBQLN1Q9UMX0 snoZ196.1-201ENST00000625269 89 ntBASIC1.34□□□□□ -2.19
UBQLN1Q9UMX0 AC010615.1-201ENST00000594254 1764 ntBASIC1.34□□□□□ -2.2
UBQLN1Q9UMX0 RNU6-845P-201ENST00000362578 103 ntBASIC1.33□□□□□ -2.2
UBQLN1Q9UMX0 Y_RNA.48-201ENST00000362710 103 ntBASIC1.33□□□□□ -2.2
UBQLN1Q9UMX0 Y_RNA.88-201ENST00000363029 99 ntBASIC1.33□□□□□ -2.2
UBQLN1Q9UMX0 U3.8-201ENST00000363675 217 ntBASIC1.33□□□□□ -2.2
UBQLN1Q9UMX0 Y_RNA.287-201ENST00000364853 94 ntBASIC1.33□□□□□ -2.2
UBQLN1Q9UMX0 SNORA25.9-201ENST00000365087 128 ntBASIC1.33□□□□□ -2.2
UBQLN1Q9UMX0 Y_RNA.482-201ENST00000384377 111 ntBASIC1.33□□□□□ -2.2
UBQLN1Q9UMX0 RNU6-541P-201ENST00000384709 110 ntBASIC1.33□□□□□ -2.2
UBQLN1Q9UMX0 MIR520A-201ENST00000384862 85 ntBASIC1.33□□□□□ -2.2
UBQLN1Q9UMX0 MIR499A-201ENST00000384903 122 ntBASIC1.33□□□□□ -2.2
UBQLN1Q9UMX0 MT-TL1-201ENST00000386347 75 ntBASIC1.33□□□□□ -2.2
UBQLN1Q9UMX0 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
UBQLN1Q9UMX0 RNU6-57P-201ENST00000411348 103 ntBASIC1.33□□□□□ -2.2
UBQLN1Q9UMX0 PDCL2P1-201ENST00000419302 352 ntBASIC1.33□□□□□ -2.2
UBQLN1Q9UMX0 USMG5P1-201ENST00000425964 177 ntBASIC1.33□□□□□ -2.2
UBQLN1Q9UMX0 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.33□□□□□ -2.2
UBQLN1Q9UMX0 AC107399.1-201ENST00000451226 265 ntBASIC1.33□□□□□ -2.2
UBQLN1Q9UMX0 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.33□□□□□ -2.2
UBQLN1Q9UMX0 AC116353.2-201ENST00000505332 712 ntBASIC1.33□□□□□ -2.2
UBQLN1Q9UMX0 AC093303.1-201ENST00000514549 295 ntBASIC1.33□□□□□ -2.2
UBQLN1Q9UMX0 Y_RNA.691-201ENST00000516611 103 ntBASIC1.33□□□□□ -2.2
UBQLN1Q9UMX0 RNA5SP437-201ENST00000517249 129 ntBASIC1.33□□□□□ -2.2
UBQLN1Q9UMX0 AC025647.1-201ENST00000517879 253 ntBASIC1.33□□□□□ -2.2
UBQLN1Q9UMX0 AC105029.1-201ENST00000520250 669 ntBASIC1.33□□□□□ -2.2
UBQLN1Q9UMX0 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.33□□□□□ -2.2
UBQLN1Q9UMX0 AL160236.1-201ENST00000556317 195 ntBASIC1.33□□□□□ -2.2
UBQLN1Q9UMX0 MIR7974-201ENST00000615835 79 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 257.6 ms