Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 MTND5P41-201ENST00000517498 206 ntBASIC3.74□□□□□ -1.81
BRPF3Q9ULD4 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.74□□□□□ -1.81
BRPF3Q9ULD4 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
BRPF3Q9ULD4 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
BRPF3Q9ULD4 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
BRPF3Q9ULD4 AL590004.2-201ENST00000404787 371 ntBASIC3.73□□□□□ -1.81
BRPF3Q9ULD4 AC080013.2-201ENST00000460866 323 ntBASIC3.73□□□□□ -1.81
BRPF3Q9ULD4 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.73□□□□□ -1.81
BRPF3Q9ULD4 MIR3199-1-201ENST00000582434 88 ntBASIC3.73□□□□□ -1.81
BRPF3Q9ULD4 AC025754.2-201ENST00000606491 432 ntBASIC3.73□□□□□ -1.81
BRPF3Q9ULD4 AC108706.1-201ENST00000611053 297 ntBASIC3.73□□□□□ -1.81
BRPF3Q9ULD4 uc_338.25-201ENST00000613756 156 ntBASIC3.73□□□□□ -1.81
BRPF3Q9ULD4 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.73□□□□□ -1.81
BRPF3Q9ULD4 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
BRPF3Q9ULD4 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.72□□□□□ -1.81
BRPF3Q9ULD4 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
BRPF3Q9ULD4 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.72□□□□□ -1.81
BRPF3Q9ULD4 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
BRPF3Q9ULD4 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
BRPF3Q9ULD4 Y_RNA.121-201ENST00000363309 113 ntBASIC3.72□□□□□ -1.81
BRPF3Q9ULD4 RNU6-899P-201ENST00000363947 107 ntBASIC3.72□□□□□ -1.81
BRPF3Q9ULD4 Y_RNA.293-201ENST00000364908 93 ntBASIC3.72□□□□□ -1.81
BRPF3Q9ULD4 Y_RNA.398-201ENST00000383952 99 ntBASIC3.72□□□□□ -1.81
BRPF3Q9ULD4 RNU5E-9P-201ENST00000411164 104 ntBASIC3.72□□□□□ -1.81
BRPF3Q9ULD4 HMGN2P35-201ENST00000412164 270 ntBASIC3.72□□□□□ -1.81
BRPF3Q9ULD4 RPS20P10-201ENST00000451209 253 ntBASIC3.72□□□□□ -1.81
BRPF3Q9ULD4 AC018630.3-201ENST00000542637 96 ntBASIC3.72□□□□□ -1.81
BRPF3Q9ULD4 AC069294.1-201ENST00000608397 350 ntBASIC3.72□□□□□ -1.81
BRPF3Q9ULD4 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.72□□□□□ -1.81
BRPF3Q9ULD4 AC068700.1-201ENST00000565862 3754 ntBASIC3.72□□□□□ -1.81
BRPF3Q9ULD4 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.72□□□□□ -1.81
BRPF3Q9ULD4 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
BRPF3Q9ULD4 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.71□□□□□ -1.81
BRPF3Q9ULD4 AC108206.1-201ENST00000570186 4159 ntBASIC3.71□□□□□ -1.82
BRPF3Q9ULD4 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.71□□□□□ -1.82
BRPF3Q9ULD4 Y_RNA.182-201ENST00000363880 111 ntBASIC3.71□□□□□ -1.82
BRPF3Q9ULD4 RNU6-461P-201ENST00000364195 107 ntBASIC3.71□□□□□ -1.82
BRPF3Q9ULD4 SNORD14D-201ENST00000384390 87 ntBASIC3.71□□□□□ -1.82
BRPF3Q9ULD4 SNORA48.5-201ENST00000391143 135 ntBASIC3.71□□□□□ -1.82
BRPF3Q9ULD4 AL445687.1-201ENST00000439946 251 ntBASIC3.71□□□□□ -1.82
BRPF3Q9ULD4 AC090515.1-201ENST00000465295 476 ntBASIC3.71□□□□□ -1.82
BRPF3Q9ULD4 RNU6-346P-201ENST00000516288 111 ntBASIC3.71□□□□□ -1.82
BRPF3Q9ULD4 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.71□□□□□ -1.82
BRPF3Q9ULD4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.71□□□□□ -1.82
BRPF3Q9ULD4 AC105245.1-201ENST00000581934 244 ntBASIC3.71□□□□□ -1.82
BRPF3Q9ULD4 snoZ196.1-201ENST00000625269 89 ntBASIC3.71□□□□□ -1.82
BRPF3Q9ULD4 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.71□□□□□ -1.82
BRPF3Q9ULD4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.7□□□□□ -1.82
BRPF3Q9ULD4 AC080128.1-201ENST00000474389 1917 ntBASIC3.7□□□□□ -1.82
BRPF3Q9ULD4 SNORD114-7-201ENST00000362520 77 ntBASIC3.7□□□□□ -1.82
BRPF3Q9ULD4 Y_RNA.124-201ENST00000363339 93 ntBASIC3.7□□□□□ -1.82
BRPF3Q9ULD4 SNORD31B-201ENST00000364977 69 ntBASIC3.7□□□□□ -1.82
BRPF3Q9ULD4 Y_RNA.412-201ENST00000384001 104 ntBASIC3.7□□□□□ -1.82
BRPF3Q9ULD4 RNU6-975P-201ENST00000384296 105 ntBASIC3.7□□□□□ -1.82
BRPF3Q9ULD4 MIR34B-201ENST00000385076 84 ntBASIC3.7□□□□□ -1.82
BRPF3Q9ULD4 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
BRPF3Q9ULD4 RNU6-381P-201ENST00000391259 108 ntBASIC3.7□□□□□ -1.82
BRPF3Q9ULD4 MIR887-201ENST00000401258 79 ntBASIC3.7□□□□□ -1.82
BRPF3Q9ULD4 AL355497.1-201ENST00000406262 551 ntBASIC3.7□□□□□ -1.82
BRPF3Q9ULD4 AL355796.1-201ENST00000406706 323 ntBASIC3.7□□□□□ -1.82
BRPF3Q9ULD4 RPS27AP9-201ENST00000477681 438 ntBASIC3.7□□□□□ -1.82
BRPF3Q9ULD4 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.7□□□□□ -1.82
BRPF3Q9ULD4 RN7SL504P-201ENST00000494496 287 ntBASIC3.7□□□□□ -1.82
BRPF3Q9ULD4 AC021269.2-201ENST00000532318 330 ntBASIC3.7□□□□□ -1.82
BRPF3Q9ULD4 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
BRPF3Q9ULD4 MIR5680-201ENST00000577577 84 ntBASIC3.7□□□□□ -1.82
BRPF3Q9ULD4 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
BRPF3Q9ULD4 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.7□□□□□ -1.82
BRPF3Q9ULD4 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.7□□□□□ -1.82
BRPF3Q9ULD4 Z82209.1-201ENST00000422141 2135 ntBASIC3.7□□□□□ -1.82
BRPF3Q9ULD4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
BRPF3Q9ULD4 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
BRPF3Q9ULD4 RNU4-10P-201ENST00000364383 140 ntBASIC3.69□□□□□ -1.82
BRPF3Q9ULD4 RNA5SP72-201ENST00000364442 117 ntBASIC3.69□□□□□ -1.82
BRPF3Q9ULD4 RNU6-312P-201ENST00000364629 107 ntBASIC3.69□□□□□ -1.82
BRPF3Q9ULD4 Y_RNA.272-201ENST00000364696 102 ntBASIC3.69□□□□□ -1.82
BRPF3Q9ULD4 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
BRPF3Q9ULD4 SNORA20B-201ENST00000384220 132 ntBASIC3.69□□□□□ -1.82
BRPF3Q9ULD4 MIR873-201ENST00000401120 77 ntBASIC3.69□□□□□ -1.82
BRPF3Q9ULD4 RNU6-57P-201ENST00000411348 103 ntBASIC3.69□□□□□ -1.82
BRPF3Q9ULD4 AL121890.1-201ENST00000435457 205 ntBASIC3.69□□□□□ -1.82
BRPF3Q9ULD4 RNU7-141P-201ENST00000459304 62 ntBASIC3.69□□□□□ -1.82
BRPF3Q9ULD4 RNU6-221P-201ENST00000459541 99 ntBASIC3.69□□□□□ -1.82
BRPF3Q9ULD4 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.69□□□□□ -1.82
BRPF3Q9ULD4 AC023141.11-201ENST00000508864 202 ntBASIC3.69□□□□□ -1.82
BRPF3Q9ULD4 RN7SKP43-201ENST00000516173 320 ntBASIC3.69□□□□□ -1.82
BRPF3Q9ULD4 RNU6-965P-201ENST00000516721 96 ntBASIC3.69□□□□□ -1.82
BRPF3Q9ULD4 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
BRPF3Q9ULD4 MIR208A-201ENST00000362287 71 ntBASIC3.68□□□□□ -1.82
BRPF3Q9ULD4 Y_RNA.75-201ENST00000362927 97 ntBASIC3.68□□□□□ -1.82
BRPF3Q9ULD4 SNORA7.4-201ENST00000384249 137 ntBASIC3.68□□□□□ -1.82
BRPF3Q9ULD4 SNORA8.3-201ENST00000384679 139 ntBASIC3.68□□□□□ -1.82
BRPF3Q9ULD4 MIR626-201ENST00000385032 94 ntBASIC3.68□□□□□ -1.82
BRPF3Q9ULD4 AC016717.1-201ENST00000448918 286 ntBASIC3.68□□□□□ -1.82
BRPF3Q9ULD4 RPL23AP7-203ENST00000449021 469 ntBASIC3.68□□□□□ -1.82
BRPF3Q9ULD4 BX510359.1-201ENST00000456973 237 ntBASIC3.68□□□□□ -1.82
BRPF3Q9ULD4 RN7SL863P-201ENST00000462370 296 ntBASIC3.68□□□□□ -1.82
BRPF3Q9ULD4 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.68□□□□□ -1.82
BRPF3Q9ULD4 UBL5P2-201ENST00000583788 219 ntBASIC3.68□□□□□ -1.82
BRPF3Q9ULD4 YPEL5P2-201ENST00000605553 359 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms