Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.97□□□□□ -2.25
NUP50Q9UKX7 AC124864.2-201ENST00000624736 186 ntBASIC0.97□□□□□ -2.25
NUP50Q9UKX7 AL133216.2-202ENST00000634512 349 ntBASIC0.97□□□□□ -2.25
NUP50Q9UKX7 RNU6-1252P-201ENST00000363054 104 ntBASIC0.96□□□□□ -2.26
NUP50Q9UKX7 RNU6-727P-201ENST00000363592 107 ntBASIC0.96□□□□□ -2.26
NUP50Q9UKX7 U3.8-201ENST00000363675 217 ntBASIC0.96□□□□□ -2.26
NUP50Q9UKX7 RNU6-873P-201ENST00000363833 107 ntBASIC0.96□□□□□ -2.26
NUP50Q9UKX7 RNU6-1187P-201ENST00000364771 110 ntBASIC0.96□□□□□ -2.26
NUP50Q9UKX7 SNORD114-22-201ENST00000365423 72 ntBASIC0.96□□□□□ -2.26
NUP50Q9UKX7 Y_RNA.373-201ENST00000365600 103 ntBASIC0.96□□□□□ -2.26
NUP50Q9UKX7 SNORA70.7-201ENST00000384159 133 ntBASIC0.96□□□□□ -2.26
NUP50Q9UKX7 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
NUP50Q9UKX7 MRPL42P3-201ENST00000401492 326 ntBASIC0.96□□□□□ -2.26
NUP50Q9UKX7 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.96□□□□□ -2.26
NUP50Q9UKX7 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.96□□□□□ -2.26
NUP50Q9UKX7 AL590632.1-201ENST00000424289 371 ntBASIC0.96□□□□□ -2.26
NUP50Q9UKX7 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.96□□□□□ -2.26
NUP50Q9UKX7 MTND1P11-201ENST00000456661 876 ntBASIC0.96□□□□□ -2.26
NUP50Q9UKX7 snoU13.18-201ENST00000459483 104 ntBASIC0.96□□□□□ -2.26
NUP50Q9UKX7 AC092991.1-201ENST00000477176 376 ntBASIC0.96□□□□□ -2.26
NUP50Q9UKX7 AC087343.1-201ENST00000477341 475 ntBASIC0.96□□□□□ -2.26
NUP50Q9UKX7 MTCO2P30-201ENST00000503662 364 ntBASIC0.96□□□□□ -2.26
NUP50Q9UKX7 Y_RNA.665-201ENST00000516177 98 ntBASIC0.96□□□□□ -2.26
NUP50Q9UKX7 Y_RNA.688-201ENST00000516565 95 ntBASIC0.96□□□□□ -2.26
NUP50Q9UKX7 AC026407.1-201ENST00000518369 204 ntBASIC0.96□□□□□ -2.26
NUP50Q9UKX7 AL512360.1-201ENST00000555346 234 ntBASIC0.96□□□□□ -2.26
NUP50Q9UKX7 AL137100.2-201ENST00000555786 315 ntBASIC0.96□□□□□ -2.26
NUP50Q9UKX7 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.96□□□□□ -2.26
NUP50Q9UKX7 AC010620.1-201ENST00000601088 1102 ntBASIC0.96□□□□□ -2.26
NUP50Q9UKX7 AL078603.1-201ENST00000603824 313 ntBASIC0.96□□□□□ -2.26
NUP50Q9UKX7 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.96□□□□□ -2.26
NUP50Q9UKX7 AL021879.1-201ENST00000611756 288 ntBASIC0.96□□□□□ -2.26
NUP50Q9UKX7 U6.73-201ENST00000619194 103 ntBASIC0.96□□□□□ -2.26
NUP50Q9UKX7 MIR7111-201ENST00000619751 72 ntBASIC0.96□□□□□ -2.26
NUP50Q9UKX7 AC099654.12-201ENST00000639868 649 ntBASIC0.96□□□□□ -2.26
NUP50Q9UKX7 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
NUP50Q9UKX7 MTND4P12-201ENST00000498999 1377 ntBASIC0.96□□□□□ -2.26
NUP50Q9UKX7 SNORD115-32-201ENST00000364079 82 ntBASIC0.95□□□□□ -2.26
NUP50Q9UKX7 Y_RNA.319-201ENST00000365138 92 ntBASIC0.95□□□□□ -2.26
NUP50Q9UKX7 SNORD116-9-201ENST00000384000 95 ntBASIC0.95□□□□□ -2.26
NUP50Q9UKX7 Y_RNA.415-201ENST00000384012 112 ntBASIC0.95□□□□□ -2.26
NUP50Q9UKX7 SNORD116-3-201ENST00000384287 95 ntBASIC0.95□□□□□ -2.26
NUP50Q9UKX7 SNORD116-7-201ENST00000384404 95 ntBASIC0.95□□□□□ -2.26
NUP50Q9UKX7 SNORD116-5-201ENST00000384462 95 ntBASIC0.95□□□□□ -2.26
NUP50Q9UKX7 RNU6-95P-201ENST00000384697 107 ntBASIC0.95□□□□□ -2.26
NUP50Q9UKX7 RNU6-780P-201ENST00000391030 104 ntBASIC0.95□□□□□ -2.26
NUP50Q9UKX7 Y_RNA.615-201ENST00000410769 117 ntBASIC0.95□□□□□ -2.26
NUP50Q9UKX7 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.95□□□□□ -2.26
NUP50Q9UKX7 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.95□□□□□ -2.26
NUP50Q9UKX7 RPS23P4-201ENST00000487908 423 ntBASIC0.95□□□□□ -2.26
NUP50Q9UKX7 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.95□□□□□ -2.26
NUP50Q9UKX7 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.95□□□□□ -2.26
NUP50Q9UKX7 SNORD116-28-201ENST00000516123 91 ntBASIC0.95□□□□□ -2.26
NUP50Q9UKX7 CYCSP23-201ENST00000519781 313 ntBASIC0.95□□□□□ -2.26
NUP50Q9UKX7 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.95□□□□□ -2.26
NUP50Q9UKX7 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.95□□□□□ -2.26
NUP50Q9UKX7 AC027288.2-201ENST00000553028 243 ntBASIC0.95□□□□□ -2.26
NUP50Q9UKX7 ZNF519P2-201ENST00000557032 169 ntBASIC0.95□□□□□ -2.26
NUP50Q9UKX7 AC010525.2-201ENST00000590920 195 ntBASIC0.95□□□□□ -2.26
NUP50Q9UKX7 Z99129.1-201ENST00000612510 255 ntBASIC0.95□□□□□ -2.26
NUP50Q9UKX7 AC022079.1-201ENST00000621546 602 ntBASIC0.95□□□□□ -2.26
NUP50Q9UKX7 AC106754.2-201ENST00000623006 233 ntBASIC0.95□□□□□ -2.26
NUP50Q9UKX7 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.95□□□□□ -2.26
NUP50Q9UKX7 RNU1-124P-201ENST00000363861 145 ntBASIC0.94□□□□□ -2.26
NUP50Q9UKX7 RNU6-42P-201ENST00000384165 107 ntBASIC0.94□□□□□ -2.26
NUP50Q9UKX7 RNU6-505P-201ENST00000384427 107 ntBASIC0.94□□□□□ -2.26
NUP50Q9UKX7 MIR153-2-201ENST00000385225 87 ntBASIC0.94□□□□□ -2.26
NUP50Q9UKX7 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.94□□□□□ -2.26
NUP50Q9UKX7 MTATP6P17-201ENST00000431030 672 ntBASIC0.94□□□□□ -2.26
NUP50Q9UKX7 SEPT14P3-201ENST00000439401 183 ntBASIC0.94□□□□□ -2.26
NUP50Q9UKX7 AL732372.2-207ENST00000445840 183 ntBASIC0.94□□□□□ -2.26
NUP50Q9UKX7 NDUFB4P10-201ENST00000452541 359 ntBASIC0.94□□□□□ -2.26
NUP50Q9UKX7 SEPT14P2-201ENST00000453405 183 ntBASIC0.94□□□□□ -2.26
NUP50Q9UKX7 SEPT14P4-201ENST00000513445 186 ntBASIC0.94□□□□□ -2.26
NUP50Q9UKX7 RNU7-99P-201ENST00000516271 62 ntBASIC0.94□□□□□ -2.26
NUP50Q9UKX7 RNA5SP220-201ENST00000516298 104 ntBASIC0.94□□□□□ -2.26
NUP50Q9UKX7 RNU6-1198P-201ENST00000516904 67 ntBASIC0.94□□□□□ -2.26
NUP50Q9UKX7 FO082796.1-201ENST00000523795 183 ntBASIC0.94□□□□□ -2.26
NUP50Q9UKX7 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.94□□□□□ -2.26
NUP50Q9UKX7 AC004584.2-201ENST00000570407 410 ntBASIC0.94□□□□□ -2.26
NUP50Q9UKX7 SNORA4-201ENST00000584302 138 ntBASIC0.94□□□□□ -2.26
NUP50Q9UKX7 POLR3GP2-201ENST00000588366 668 ntBASIC0.94□□□□□ -2.26
NUP50Q9UKX7 AC022432.1-201ENST00000595739 310 ntBASIC0.94□□□□□ -2.26
NUP50Q9UKX7 AC245008.1-201ENST00000608123 476 ntBASIC0.94□□□□□ -2.26
NUP50Q9UKX7 SNORD3E-202ENST00000627253 216 ntBASIC0.94□□□□□ -2.26
NUP50Q9UKX7 AC018630.2-201ENST00000534866 2403 ntBASIC0.93□□□□□ -2.26
NUP50Q9UKX7 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
NUP50Q9UKX7 RNY1P14-201ENST00000384426 108 ntBASIC0.93□□□□□ -2.26
NUP50Q9UKX7 AL034345.1-201ENST00000407768 123 ntBASIC0.93□□□□□ -2.26
NUP50Q9UKX7 RPL30P16-201ENST00000419341 429 ntBASIC0.93□□□□□ -2.26
NUP50Q9UKX7 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.93□□□□□ -2.26
NUP50Q9UKX7 HSPE1P13-201ENST00000451143 297 ntBASIC0.93□□□□□ -2.26
NUP50Q9UKX7 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.93□□□□□ -2.26
NUP50Q9UKX7 RPL39P28-201ENST00000465655 155 ntBASIC0.93□□□□□ -2.26
NUP50Q9UKX7 AC091179.3-201ENST00000474761 144 ntBASIC0.93□□□□□ -2.26
NUP50Q9UKX7 AC019235.1-201ENST00000503847 207 ntBASIC0.93□□□□□ -2.26
NUP50Q9UKX7 RNU6-922P-201ENST00000516753 99 ntBASIC0.93□□□□□ -2.26
NUP50Q9UKX7 Y_RNA.704-201ENST00000516851 102 ntBASIC0.93□□□□□ -2.26
NUP50Q9UKX7 SNORA70.22-201ENST00000517160 124 ntBASIC0.93□□□□□ -2.26
NUP50Q9UKX7 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms