Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 MIR3126-201ENST00000577443 74 ntBASIC2.67□□□□□ -1.98
HDAC9Q9UKV0 MIR5006-201ENST00000583027 110 ntBASIC2.67□□□□□ -1.98
HDAC9Q9UKV0 AC078899.2-201ENST00000595282 212 ntBASIC2.67□□□□□ -1.98
HDAC9Q9UKV0 RPS29P30-201ENST00000600975 111 ntBASIC2.67□□□□□ -1.98
HDAC9Q9UKV0 AL355297.3-201ENST00000604082 446 ntBASIC2.67□□□□□ -1.98
HDAC9Q9UKV0 AL021879.1-201ENST00000611756 288 ntBASIC2.67□□□□□ -1.98
HDAC9Q9UKV0 AC010205.1-201ENST00000616668 449 ntBASIC2.67□□□□□ -1.98
HDAC9Q9UKV0 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HDAC9Q9UKV0 MTND5P35-201ENST00000557537 1720 ntBASIC2.66□□□□□ -1.98
HDAC9Q9UKV0 MIR21-201ENST00000362134 72 ntBASIC2.66□□□□□ -1.98
HDAC9Q9UKV0 Y_RNA.179-201ENST00000363844 90 ntBASIC2.66□□□□□ -1.98
HDAC9Q9UKV0 SNORA67.2-201ENST00000384300 149 ntBASIC2.66□□□□□ -1.98
HDAC9Q9UKV0 U8.13-201ENST00000390842 128 ntBASIC2.66□□□□□ -1.98
HDAC9Q9UKV0 SNORD78.2-201ENST00000391076 69 ntBASIC2.66□□□□□ -1.98
HDAC9Q9UKV0 RNA5SP181-201ENST00000410246 98 ntBASIC2.66□□□□□ -1.98
HDAC9Q9UKV0 SNORD12B-201ENST00000410433 91 ntBASIC2.66□□□□□ -1.98
HDAC9Q9UKV0 RNU6-130P-201ENST00000411112 103 ntBASIC2.66□□□□□ -1.98
HDAC9Q9UKV0 RNU2-32P-201ENST00000411193 191 ntBASIC2.66□□□□□ -1.98
HDAC9Q9UKV0 EDDM3CP-201ENST00000415977 425 ntBASIC2.66□□□□□ -1.98
HDAC9Q9UKV0 FCF1P4-201ENST00000448326 183 ntBASIC2.66□□□□□ -1.98
HDAC9Q9UKV0 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.66□□□□□ -1.98
HDAC9Q9UKV0 AC067942.3-201ENST00000512025 362 ntBASIC2.66□□□□□ -1.98
HDAC9Q9UKV0 RNA5SP200-201ENST00000516360 103 ntBASIC2.66□□□□□ -1.98
HDAC9Q9UKV0 Y_RNA.683-201ENST00000516508 93 ntBASIC2.66□□□□□ -1.98
HDAC9Q9UKV0 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.66□□□□□ -1.98
HDAC9Q9UKV0 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.66□□□□□ -1.98
HDAC9Q9UKV0 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.66□□□□□ -1.98
HDAC9Q9UKV0 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.66□□□□□ -1.98
HDAC9Q9UKV0 RAC1P9-201ENST00000604990 392 ntBASIC2.66□□□□□ -1.98
HDAC9Q9UKV0 AL121655.1-201ENST00000605811 308 ntBASIC2.66□□□□□ -1.98
HDAC9Q9UKV0 MIR1248-201ENST00000629190 106 ntBASIC2.66□□□□□ -1.98
HDAC9Q9UKV0 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HDAC9Q9UKV0 Y_RNA.796-201ENST00000364268 102 ntBASIC2.65□□□□□ -1.99
HDAC9Q9UKV0 Y_RNA.799-201ENST00000364992 102 ntBASIC2.65□□□□□ -1.99
HDAC9Q9UKV0 RNU6-234P-201ENST00000365229 104 ntBASIC2.65□□□□□ -1.99
HDAC9Q9UKV0 SNORA25B-201ENST00000365507 128 ntBASIC2.65□□□□□ -1.99
HDAC9Q9UKV0 RNU6-546P-201ENST00000383991 107 ntBASIC2.65□□□□□ -1.99
HDAC9Q9UKV0 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.65□□□□□ -1.99
HDAC9Q9UKV0 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.65□□□□□ -1.99
HDAC9Q9UKV0 AL358176.2-201ENST00000425769 204 ntBASIC2.65□□□□□ -1.99
HDAC9Q9UKV0 AC108667.1-201ENST00000428618 249 ntBASIC2.65□□□□□ -1.99
HDAC9Q9UKV0 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.65□□□□□ -1.99
HDAC9Q9UKV0 HMGN1P10-201ENST00000474557 553 ntBASIC2.65□□□□□ -1.99
HDAC9Q9UKV0 RPL26P26-201ENST00000480251 434 ntBASIC2.65□□□□□ -1.99
HDAC9Q9UKV0 RNU6-965P-201ENST00000516721 96 ntBASIC2.65□□□□□ -1.99
HDAC9Q9UKV0 SNORA31.25-201ENST00000517242 134 ntBASIC2.65□□□□□ -1.99
HDAC9Q9UKV0 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.65□□□□□ -1.99
HDAC9Q9UKV0 MIR6895-201ENST00000613497 78 ntBASIC2.65□□□□□ -1.99
HDAC9Q9UKV0 AC240442.1-201ENST00000616055 283 ntBASIC2.65□□□□□ -1.99
HDAC9Q9UKV0 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
HDAC9Q9UKV0 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
HDAC9Q9UKV0 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
HDAC9Q9UKV0 Y_RNA.122-201ENST00000363331 96 ntBASIC2.64□□□□□ -1.99
HDAC9Q9UKV0 Y_RNA.459-201ENST00000384251 102 ntBASIC2.64□□□□□ -1.99
HDAC9Q9UKV0 Y_RNA.471-201ENST00000384312 102 ntBASIC2.64□□□□□ -1.99
HDAC9Q9UKV0 MIR499A-201ENST00000384903 122 ntBASIC2.64□□□□□ -1.99
HDAC9Q9UKV0 MRPL35P1-201ENST00000404272 572 ntBASIC2.64□□□□□ -1.99
HDAC9Q9UKV0 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.64□□□□□ -1.99
HDAC9Q9UKV0 AC073910.1-201ENST00000445047 438 ntBASIC2.64□□□□□ -1.99
HDAC9Q9UKV0 RPS23P5-201ENST00000495419 428 ntBASIC2.64□□□□□ -1.99
HDAC9Q9UKV0 ATP5EP1-201ENST00000510257 156 ntBASIC2.64□□□□□ -1.99
HDAC9Q9UKV0 AC131281.1-201ENST00000522984 164 ntBASIC2.64□□□□□ -1.99
HDAC9Q9UKV0 NDUFA5P6-201ENST00000542110 379 ntBASIC2.64□□□□□ -1.99
HDAC9Q9UKV0 AL117187.1-201ENST00000555482 181 ntBASIC2.64□□□□□ -1.99
HDAC9Q9UKV0 MIR4659A-201ENST00000580269 81 ntBASIC2.64□□□□□ -1.99
HDAC9Q9UKV0 snoU13.31-201ENST00000607291 104 ntBASIC2.64□□□□□ -1.99
HDAC9Q9UKV0 AC011476.5-201ENST00000615594 130 ntBASIC2.64□□□□□ -1.99
HDAC9Q9UKV0 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
HDAC9Q9UKV0 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
HDAC9Q9UKV0 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
HDAC9Q9UKV0 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
HDAC9Q9UKV0 RNU6-727P-201ENST00000363592 107 ntBASIC2.63□□□□□ -1.99
HDAC9Q9UKV0 Y_RNA.415-201ENST00000384012 112 ntBASIC2.63□□□□□ -1.99
HDAC9Q9UKV0 SNORA6-201ENST00000384033 151 ntBASIC2.63□□□□□ -1.99
HDAC9Q9UKV0 RNU6-926P-201ENST00000384075 107 ntBASIC2.63□□□□□ -1.99
HDAC9Q9UKV0 RNU6-1105P-201ENST00000384774 107 ntBASIC2.63□□□□□ -1.99
HDAC9Q9UKV0 MIR489-201ENST00000384923 84 ntBASIC2.63□□□□□ -1.99
HDAC9Q9UKV0 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.63□□□□□ -1.99
HDAC9Q9UKV0 MTATP8P1-201ENST00000467115 207 ntBASIC2.63□□□□□ -1.99
HDAC9Q9UKV0 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.63□□□□□ -1.99
HDAC9Q9UKV0 SNORA40.9-201ENST00000515895 93 ntBASIC2.63□□□□□ -1.99
HDAC9Q9UKV0 RNU5F-4P-201ENST00000516581 114 ntBASIC2.63□□□□□ -1.99
HDAC9Q9UKV0 SCARNA16.3-201ENST00000516595 184 ntBASIC2.63□□□□□ -1.99
HDAC9Q9UKV0 AK6P2-201ENST00000549020 471 ntBASIC2.63□□□□□ -1.99
HDAC9Q9UKV0 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.63□□□□□ -1.99
HDAC9Q9UKV0 SNORD11B-201ENST00000607707 90 ntBASIC2.63□□□□□ -1.99
HDAC9Q9UKV0 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.63□□□□□ -1.99
HDAC9Q9UKV0 AC009831.4-201ENST00000620744 325 ntBASIC2.63□□□□□ -1.99
HDAC9Q9UKV0 AC008873.1-201ENST00000625051 138 ntBASIC2.63□□□□□ -1.99
HDAC9Q9UKV0 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
HDAC9Q9UKV0 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.63□□□□□ -1.99
HDAC9Q9UKV0 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HDAC9Q9UKV0 AC007336.1-201ENST00000576365 3828 ntBASIC2.62□□□□□ -1.99
HDAC9Q9UKV0 Y_RNA.133-201ENST00000363428 110 ntBASIC2.62□□□□□ -1.99
HDAC9Q9UKV0 Y_RNA.276-201ENST00000364732 109 ntBASIC2.62□□□□□ -1.99
HDAC9Q9UKV0 RNU1-51P-201ENST00000365345 176 ntBASIC2.62□□□□□ -1.99
HDAC9Q9UKV0 RNU6-611P-201ENST00000384276 104 ntBASIC2.62□□□□□ -1.99
HDAC9Q9UKV0 AL023284.1-201ENST00000403956 276 ntBASIC2.62□□□□□ -1.99
HDAC9Q9UKV0 AL355497.1-201ENST00000406262 551 ntBASIC2.62□□□□□ -1.99
HDAC9Q9UKV0 ELOCP21-201ENST00000412558 336 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms