Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 DPPA3P3-201ENST00000603842 430 ntBASIC-1.01□□□□□ -2.57
SCN11AQ9UI33 AC121247.2-201ENST00000604776 136 ntBASIC-1.01□□□□□ -2.57
SCN11AQ9UI33 AL442067.1-201ENST00000613261 223 ntBASIC-1.01□□□□□ -2.57
SCN11AQ9UI33 MTND4P9-201ENST00000507819 1346 ntBASIC-1.01□□□□□ -2.57
SCN11AQ9UI33 CDR1-202ENST00000625883 1485 ntBASIC-1.01□□□□□ -2.57
SCN11AQ9UI33 MIR365A-201ENST00000362260 87 ntBASIC-1.01□□□□□ -2.57
SCN11AQ9UI33 Y_RNA.33-201ENST00000362591 102 ntBASIC-1.01□□□□□ -2.57
SCN11AQ9UI33 RNU6-78P-201ENST00000362897 107 ntBASIC-1.01□□□□□ -2.57
SCN11AQ9UI33 MIR802-201ENST00000390235 94 ntBASIC-1.01□□□□□ -2.57
SCN11AQ9UI33 MIR1185-2-201ENST00000408687 86 ntBASIC-1.01□□□□□ -2.57
SCN11AQ9UI33 RNU7-99P-201ENST00000516271 62 ntBASIC-1.01□□□□□ -2.57
SCN11AQ9UI33 LRRC34P1-201ENST00000542742 915 ntBASIC-1.01□□□□□ -2.57
SCN11AQ9UI33 AL133153.1-201ENST00000557756 303 ntBASIC-1.01□□□□□ -2.57
SCN11AQ9UI33 Z99289.3-201ENST00000605586 594 ntBASIC-1.01□□□□□ -2.57
SCN11AQ9UI33 AC027279.3-201ENST00000625055 122 ntBASIC-1.01□□□□□ -2.57
SCN11AQ9UI33 MIR1322-201ENST00000638013 71 ntBASIC-1.01□□□□□ -2.57
SCN11AQ9UI33 MIRLET7C-201ENST00000362160 84 ntBASIC-1.02□□□□□ -2.57
SCN11AQ9UI33 RNU1-76P-201ENST00000362903 159 ntBASIC-1.02□□□□□ -2.57
SCN11AQ9UI33 RNU6-1240P-201ENST00000365155 104 ntBASIC-1.02□□□□□ -2.57
SCN11AQ9UI33 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.02□□□□□ -2.57
SCN11AQ9UI33 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.02□□□□□ -2.57
SCN11AQ9UI33 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC-1.02□□□□□ -2.57
SCN11AQ9UI33 AL953862.1-201ENST00000423016 168 ntBASIC-1.02□□□□□ -2.57
SCN11AQ9UI33 EEF1E1P1-201ENST00000446998 430 ntBASIC-1.02□□□□□ -2.57
SCN11AQ9UI33 RNU6-1261P-201ENST00000517194 104 ntBASIC-1.02□□□□□ -2.57
SCN11AQ9UI33 MIR3152-201ENST00000579801 74 ntBASIC-1.02□□□□□ -2.57
SCN11AQ9UI33 AC090617.9-201ENST00000623751 147 ntBASIC-1.02□□□□□ -2.57
SCN11AQ9UI33 MTND5P42-201ENST00000637720 498 ntBASIC-1.02□□□□□ -2.57
SCN11AQ9UI33 MTND5P33-201ENST00000571250 1450 ntBASIC-1.02□□□□□ -2.57
SCN11AQ9UI33 RNU6-839P-201ENST00000363347 108 ntBASIC-1.03□□□□□ -2.57
SCN11AQ9UI33 RNU6-1048P-201ENST00000364054 107 ntBASIC-1.03□□□□□ -2.57
SCN11AQ9UI33 RNU6-10P-201ENST00000384036 107 ntBASIC-1.03□□□□□ -2.57
SCN11AQ9UI33 SNORA67.2-201ENST00000384300 149 ntBASIC-1.03□□□□□ -2.57
SCN11AQ9UI33 Y_RNA.477-201ENST00000384352 108 ntBASIC-1.03□□□□□ -2.57
SCN11AQ9UI33 RNU6-15P-201ENST00000384534 107 ntBASIC-1.03□□□□□ -2.57
SCN11AQ9UI33 SNORA75.1-201ENST00000391130 148 ntBASIC-1.03□□□□□ -2.57
SCN11AQ9UI33 RNU6-447P-201ENST00000410293 104 ntBASIC-1.03□□□□□ -2.57
SCN11AQ9UI33 RNU6-1118P-201ENST00000410382 104 ntBASIC-1.03□□□□□ -2.57
SCN11AQ9UI33 RNU6-1076P-201ENST00000410397 104 ntBASIC-1.03□□□□□ -2.57
SCN11AQ9UI33 RNU6-355P-201ENST00000410427 104 ntBASIC-1.03□□□□□ -2.57
SCN11AQ9UI33 RNU6-791P-201ENST00000410467 104 ntBASIC-1.03□□□□□ -2.57
SCN11AQ9UI33 RNU6-705P-201ENST00000410601 104 ntBASIC-1.03□□□□□ -2.57
SCN11AQ9UI33 RNU6-1100P-201ENST00000410691 104 ntBASIC-1.03□□□□□ -2.57
SCN11AQ9UI33 RNU6-860P-201ENST00000410860 104 ntBASIC-1.03□□□□□ -2.57
SCN11AQ9UI33 RNU6-1217P-201ENST00000411276 104 ntBASIC-1.03□□□□□ -2.57
SCN11AQ9UI33 RNU6-785P-201ENST00000411324 104 ntBASIC-1.03□□□□□ -2.57
SCN11AQ9UI33 RPS3AP3-201ENST00000411933 242 ntBASIC-1.03□□□□□ -2.57
SCN11AQ9UI33 AC244670.1-201ENST00000436879 112 ntBASIC-1.03□□□□□ -2.57
SCN11AQ9UI33 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-1.03□□□□□ -2.57
SCN11AQ9UI33 RPS29P27-201ENST00000463711 170 ntBASIC-1.03□□□□□ -2.57
SCN11AQ9UI33 AC090572.1-201ENST00000519251 160 ntBASIC-1.03□□□□□ -2.57
SCN11AQ9UI33 MIR4753-201ENST00000585119 83 ntBASIC-1.03□□□□□ -2.57
SCN11AQ9UI33 AC133794.1-201ENST00000602731 914 ntBASIC-1.03□□□□□ -2.57
SCN11AQ9UI33 AL596327.1-201ENST00000603629 213 ntBASIC-1.03□□□□□ -2.57
SCN11AQ9UI33 U6.90-201ENST00000614007 104 ntBASIC-1.03□□□□□ -2.57
SCN11AQ9UI33 U4.2-201ENST00000618561 85 ntBASIC-1.03□□□□□ -2.57
SCN11AQ9UI33 U6.70-201ENST00000620287 104 ntBASIC-1.03□□□□□ -2.57
SCN11AQ9UI33 AC103706.2-201ENST00000638080 240 ntBASIC-1.03□□□□□ -2.57
SCN11AQ9UI33 AC091304.10-201ENST00000641554 121 ntBASIC-1.03□□□□□ -2.57
SCN11AQ9UI33 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-1.03□□□□□ -2.57
SCN11AQ9UI33 RNU6-480P-201ENST00000384332 107 ntBASIC-1.03□□□□□ -2.58
SCN11AQ9UI33 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-1.03□□□□□ -2.58
SCN11AQ9UI33 HSFY7P-201ENST00000432672 318 ntBASIC-1.03□□□□□ -2.58
SCN11AQ9UI33 HSFY8P-201ENST00000437934 318 ntBASIC-1.03□□□□□ -2.58
SCN11AQ9UI33 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-1.03□□□□□ -2.58
SCN11AQ9UI33 RNU6-1232P-201ENST00000516299 86 ntBASIC-1.03□□□□□ -2.58
SCN11AQ9UI33 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-1.03□□□□□ -2.58
SCN11AQ9UI33 RMST_7.1-201ENST00000621935 268 ntBASIC-1.03□□□□□ -2.58
SCN11AQ9UI33 Y_RNA.265-201ENST00000364677 108 ntBASIC-1.04□□□□□ -2.58
SCN11AQ9UI33 RNU6-187P-201ENST00000384139 106 ntBASIC-1.04□□□□□ -2.58
SCN11AQ9UI33 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.04□□□□□ -2.58
SCN11AQ9UI33 MTND3P20-201ENST00000407663 186 ntBASIC-1.04□□□□□ -2.58
SCN11AQ9UI33 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-1.04□□□□□ -2.58
SCN11AQ9UI33 AL365184.2-201ENST00000431139 435 ntBASIC-1.04□□□□□ -2.58
SCN11AQ9UI33 PCNPP5-201ENST00000452246 481 ntBASIC-1.04□□□□□ -2.58
SCN11AQ9UI33 AC107297.1-201ENST00000459991 176 ntBASIC-1.04□□□□□ -2.58
SCN11AQ9UI33 AC079395.1-201ENST00000510981 262 ntBASIC-1.04□□□□□ -2.58
SCN11AQ9UI33 RNU6-123P-201ENST00000516163 102 ntBASIC-1.04□□□□□ -2.58
SCN11AQ9UI33 Y_RNA.687-201ENST00000516558 91 ntBASIC-1.04□□□□□ -2.58
SCN11AQ9UI33 AC133485.4-201ENST00000561835 220 ntBASIC-1.04□□□□□ -2.58
SCN11AQ9UI33 SNORD92-201ENST00000585078 85 ntBASIC-1.04□□□□□ -2.58
SCN11AQ9UI33 AC009994.1-201ENST00000606889 253 ntBASIC-1.04□□□□□ -2.58
SCN11AQ9UI33 MIR6514-201ENST00000622549 70 ntBASIC-1.04□□□□□ -2.58
SCN11AQ9UI33 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-1.04□□□□□ -2.58
SCN11AQ9UI33 RNU6-527P-201ENST00000363425 104 ntBASIC-1.05□□□□□ -2.58
SCN11AQ9UI33 RNU6-817P-201ENST00000391083 104 ntBASIC-1.05□□□□□ -2.58
SCN11AQ9UI33 RNA5SP482-201ENST00000391269 118 ntBASIC-1.05□□□□□ -2.58
SCN11AQ9UI33 AL079342.2-201ENST00000403367 482 ntBASIC-1.05□□□□□ -2.58
SCN11AQ9UI33 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-1.05□□□□□ -2.58
SCN11AQ9UI33 MTND1P14-201ENST00000427400 950 ntBASIC-1.05□□□□□ -2.58
SCN11AQ9UI33 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-1.05□□□□□ -2.58
SCN11AQ9UI33 AC093899.1-201ENST00000457984 376 ntBASIC-1.05□□□□□ -2.58
SCN11AQ9UI33 RNU7-102P-201ENST00000458948 62 ntBASIC-1.05□□□□□ -2.58
SCN11AQ9UI33 SNORA74.3-201ENST00000517108 154 ntBASIC-1.05□□□□□ -2.58
SCN11AQ9UI33 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-1.05□□□□□ -2.58
SCN11AQ9UI33 AC138749.4-201ENST00000563970 127 ntBASIC-1.05□□□□□ -2.58
SCN11AQ9UI33 AL355375.2-201ENST00000574825 175 ntBASIC-1.05□□□□□ -2.58
SCN11AQ9UI33 MIR4293-201ENST00000584305 78 ntBASIC-1.05□□□□□ -2.58
SCN11AQ9UI33 AL158042.1-201ENST00000605338 460 ntBASIC-1.05□□□□□ -2.58
SCN11AQ9UI33 MIR7107-201ENST00000611489 80 ntBASIC-1.05□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms