Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 MTND4P18-201ENST00000447010 465 ntBASIC1.42□□□□□ -2.18
ZCCHC3Q9NUD5 FGF7P6-202ENST00000451282 293 ntBASIC1.42□□□□□ -2.18
ZCCHC3Q9NUD5 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.42□□□□□ -2.18
ZCCHC3Q9NUD5 Y_RNA.675-201ENST00000516389 149 ntBASIC1.42□□□□□ -2.18
ZCCHC3Q9NUD5 AL121579.1-201ENST00000555129 305 ntBASIC1.42□□□□□ -2.18
ZCCHC3Q9NUD5 SNORD53B-201ENST00000577887 78 ntBASIC1.42□□□□□ -2.18
ZCCHC3Q9NUD5 AC005014.2-201ENST00000607795 599 ntBASIC1.42□□□□□ -2.18
ZCCHC3Q9NUD5 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
ZCCHC3Q9NUD5 MTND5P35-201ENST00000557537 1720 ntBASIC1.42□□□□□ -2.18
ZCCHC3Q9NUD5 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
ZCCHC3Q9NUD5 RNU6-222P-201ENST00000362438 107 ntBASIC1.41□□□□□ -2.18
ZCCHC3Q9NUD5 SNORD33-201ENST00000362761 85 ntBASIC1.41□□□□□ -2.18
ZCCHC3Q9NUD5 Y_RNA.339-201ENST00000365325 102 ntBASIC1.41□□□□□ -2.18
ZCCHC3Q9NUD5 Y_RNA.473-201ENST00000384333 102 ntBASIC1.41□□□□□ -2.18
ZCCHC3Q9NUD5 MIR320A-201ENST00000385302 82 ntBASIC1.41□□□□□ -2.18
ZCCHC3Q9NUD5 Y_RNA.594-201ENST00000410373 140 ntBASIC1.41□□□□□ -2.18
ZCCHC3Q9NUD5 RNU6-1050P-201ENST00000410388 107 ntBASIC1.41□□□□□ -2.18
ZCCHC3Q9NUD5 RNU6-955P-201ENST00000410497 104 ntBASIC1.41□□□□□ -2.18
ZCCHC3Q9NUD5 RN7SKP51-201ENST00000410781 304 ntBASIC1.41□□□□□ -2.18
ZCCHC3Q9NUD5 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.41□□□□□ -2.18
ZCCHC3Q9NUD5 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.41□□□□□ -2.18
ZCCHC3Q9NUD5 AC079140.2-201ENST00000506193 142 ntBASIC1.41□□□□□ -2.18
ZCCHC3Q9NUD5 Y_RNA.683-201ENST00000516508 93 ntBASIC1.41□□□□□ -2.18
ZCCHC3Q9NUD5 RNU7-128P-201ENST00000517247 62 ntBASIC1.41□□□□□ -2.18
ZCCHC3Q9NUD5 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.41□□□□□ -2.18
ZCCHC3Q9NUD5 AL442163.3-201ENST00000554110 156 ntBASIC1.41□□□□□ -2.18
ZCCHC3Q9NUD5 AL137100.2-201ENST00000555786 315 ntBASIC1.41□□□□□ -2.18
ZCCHC3Q9NUD5 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.41□□□□□ -2.18
ZCCHC3Q9NUD5 FRG2DP-202ENST00000566967 323 ntBASIC1.41□□□□□ -2.18
ZCCHC3Q9NUD5 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.41□□□□□ -2.18
ZCCHC3Q9NUD5 U6.73-201ENST00000619194 103 ntBASIC1.41□□□□□ -2.18
ZCCHC3Q9NUD5 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
ZCCHC3Q9NUD5 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.4□□□□□ -2.18
ZCCHC3Q9NUD5 RNU6-1266P-201ENST00000362794 105 ntBASIC1.4□□□□□ -2.19
ZCCHC3Q9NUD5 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
ZCCHC3Q9NUD5 RNU6-950P-201ENST00000384651 107 ntBASIC1.4□□□□□ -2.19
ZCCHC3Q9NUD5 MIR190B-201ENST00000401119 79 ntBASIC1.4□□□□□ -2.19
ZCCHC3Q9NUD5 AC004965.1-201ENST00000413033 213 ntBASIC1.4□□□□□ -2.19
ZCCHC3Q9NUD5 RPS27P16-201ENST00000425758 201 ntBASIC1.4□□□□□ -2.19
ZCCHC3Q9NUD5 RPS3AP52-201ENST00000435639 297 ntBASIC1.4□□□□□ -2.19
ZCCHC3Q9NUD5 AL606517.2-201ENST00000442855 241 ntBASIC1.4□□□□□ -2.19
ZCCHC3Q9NUD5 SNORD13-201ENST00000459299 104 ntBASIC1.4□□□□□ -2.19
ZCCHC3Q9NUD5 RNU7-34P-201ENST00000459394 64 ntBASIC1.4□□□□□ -2.19
ZCCHC3Q9NUD5 Y_RNA.670-201ENST00000516255 105 ntBASIC1.4□□□□□ -2.19
ZCCHC3Q9NUD5 AC091144.1-201ENST00000519573 138 ntBASIC1.4□□□□□ -2.19
ZCCHC3Q9NUD5 AC093023.1-201ENST00000547375 507 ntBASIC1.4□□□□□ -2.19
ZCCHC3Q9NUD5 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.4□□□□□ -2.19
ZCCHC3Q9NUD5 AC090617.3-201ENST00000573670 475 ntBASIC1.4□□□□□ -2.19
ZCCHC3Q9NUD5 AC080078.2-201ENST00000603766 501 ntBASIC1.4□□□□□ -2.19
ZCCHC3Q9NUD5 AC022217.4-201ENST00000604389 163 ntBASIC1.4□□□□□ -2.19
ZCCHC3Q9NUD5 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
ZCCHC3Q9NUD5 Y_RNA.2-201ENST00000362330 96 ntBASIC1.39□□□□□ -2.19
ZCCHC3Q9NUD5 Y_RNA.184-201ENST00000363884 108 ntBASIC1.39□□□□□ -2.19
ZCCHC3Q9NUD5 SNORA67.6-201ENST00000391093 99 ntBASIC1.39□□□□□ -2.19
ZCCHC3Q9NUD5 MRPL35P1-201ENST00000404272 572 ntBASIC1.39□□□□□ -2.19
ZCCHC3Q9NUD5 EIF1P2-201ENST00000428233 350 ntBASIC1.39□□□□□ -2.19
ZCCHC3Q9NUD5 TOMM22P2-201ENST00000430735 237 ntBASIC1.39□□□□□ -2.19
ZCCHC3Q9NUD5 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.39□□□□□ -2.19
ZCCHC3Q9NUD5 AL121890.1-201ENST00000435457 205 ntBASIC1.39□□□□□ -2.19
ZCCHC3Q9NUD5 AC005002.2-201ENST00000438228 269 ntBASIC1.39□□□□□ -2.19
ZCCHC3Q9NUD5 AC099513.1-201ENST00000490423 301 ntBASIC1.39□□□□□ -2.19
ZCCHC3Q9NUD5 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.39□□□□□ -2.19
ZCCHC3Q9NUD5 AC018710.1-201ENST00000506509 158 ntBASIC1.39□□□□□ -2.19
ZCCHC3Q9NUD5 AC105029.1-201ENST00000520250 669 ntBASIC1.39□□□□□ -2.19
ZCCHC3Q9NUD5 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.39□□□□□ -2.19
ZCCHC3Q9NUD5 AC011712.1-201ENST00000588959 234 ntBASIC1.39□□□□□ -2.19
ZCCHC3Q9NUD5 AP001485.1-201ENST00000604799 199 ntBASIC1.39□□□□□ -2.19
ZCCHC3Q9NUD5 AC084782.3-201ENST00000612282 578 ntBASIC1.39□□□□□ -2.19
ZCCHC3Q9NUD5 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.39□□□□□ -2.19
ZCCHC3Q9NUD5 MTND5P16-201ENST00000460269 1703 ntBASIC1.39□□□□□ -2.19
ZCCHC3Q9NUD5 AL161722.3-201ENST00000605789 2983 ntBASIC1.39□□□□□ -2.19
ZCCHC3Q9NUD5 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
ZCCHC3Q9NUD5 RNU6-1186P-201ENST00000410429 97 ntBASIC1.38□□□□□ -2.19
ZCCHC3Q9NUD5 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.38□□□□□ -2.19
ZCCHC3Q9NUD5 AL354695.1-201ENST00000427935 228 ntBASIC1.38□□□□□ -2.19
ZCCHC3Q9NUD5 AC107399.1-201ENST00000451226 265 ntBASIC1.38□□□□□ -2.19
ZCCHC3Q9NUD5 RNU7-99P-201ENST00000516271 62 ntBASIC1.38□□□□□ -2.19
ZCCHC3Q9NUD5 SNORA31.10-201ENST00000516482 106 ntBASIC1.38□□□□□ -2.19
ZCCHC3Q9NUD5 Y_RNA.708-201ENST00000516950 96 ntBASIC1.38□□□□□ -2.19
ZCCHC3Q9NUD5 RNU6-548P-201ENST00000517083 115 ntBASIC1.38□□□□□ -2.19
ZCCHC3Q9NUD5 SNORA31.24-201ENST00000517232 57 ntBASIC1.38□□□□□ -2.19
ZCCHC3Q9NUD5 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.38□□□□□ -2.19
ZCCHC3Q9NUD5 APOOP3-201ENST00000536787 586 ntBASIC1.38□□□□□ -2.19
ZCCHC3Q9NUD5 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.38□□□□□ -2.19
ZCCHC3Q9NUD5 AC125232.2-201ENST00000592457 143 ntBASIC1.38□□□□□ -2.19
ZCCHC3Q9NUD5 AL929325.1-201ENST00000603096 117 ntBASIC1.38□□□□□ -2.19
ZCCHC3Q9NUD5 AL121890.5-201ENST00000620848 304 ntBASIC1.38□□□□□ -2.19
ZCCHC3Q9NUD5 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.38□□□□□ -2.19
ZCCHC3Q9NUD5 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
ZCCHC3Q9NUD5 RNY1P16-201ENST00000363063 111 ntBASIC1.37□□□□□ -2.19
ZCCHC3Q9NUD5 Y_RNA.364-201ENST00000365532 101 ntBASIC1.37□□□□□ -2.19
ZCCHC3Q9NUD5 Y_RNA.482-201ENST00000384377 111 ntBASIC1.37□□□□□ -2.19
ZCCHC3Q9NUD5 RNU6-601P-201ENST00000384540 107 ntBASIC1.37□□□□□ -2.19
ZCCHC3Q9NUD5 MIR329-1-201ENST00000385028 80 ntBASIC1.37□□□□□ -2.19
ZCCHC3Q9NUD5 RNU6-700P-201ENST00000391043 107 ntBASIC1.37□□□□□ -2.19
ZCCHC3Q9NUD5 RNU6-1001P-201ENST00000411265 100 ntBASIC1.37□□□□□ -2.19
ZCCHC3Q9NUD5 RPL37P10-201ENST00000412884 288 ntBASIC1.37□□□□□ -2.19
ZCCHC3Q9NUD5 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.37□□□□□ -2.19
ZCCHC3Q9NUD5 RPS29P23-201ENST00000458635 123 ntBASIC1.37□□□□□ -2.19
ZCCHC3Q9NUD5 SNORD65B-201ENST00000459126 73 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms