Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 MIR1289-2-201ENST00000408360 111 ntBASIC2.54□□□□□ -2
VPS45Q9NRW7 AL603825.1-201ENST00000438481 80 ntBASIC2.54□□□□□ -2
VPS45Q9NRW7 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.54□□□□□ -2
VPS45Q9NRW7 IPO7P1-201ENST00000442031 636 ntBASIC2.54□□□□□ -2
VPS45Q9NRW7 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.54□□□□□ -2
VPS45Q9NRW7 UQCRBP2-201ENST00000447827 297 ntBASIC2.54□□□□□ -2
VPS45Q9NRW7 LINC01399-202ENST00000458450 244 ntBASIC2.54□□□□□ -2
VPS45Q9NRW7 RPL26P26-201ENST00000480251 434 ntBASIC2.54□□□□□ -2
VPS45Q9NRW7 RPS23P5-201ENST00000495419 428 ntBASIC2.54□□□□□ -2
VPS45Q9NRW7 RN7SL636P-201ENST00000497504 294 ntBASIC2.54□□□□□ -2
VPS45Q9NRW7 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.54□□□□□ -2
VPS45Q9NRW7 AC025465.3-201ENST00000510570 311 ntBASIC2.54□□□□□ -2
VPS45Q9NRW7 SNORA31.11-201ENST00000516528 139 ntBASIC2.54□□□□□ -2
VPS45Q9NRW7 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.54□□□□□ -2
VPS45Q9NRW7 AC004817.2-201ENST00000561794 651 ntBASIC2.54□□□□□ -2
VPS45Q9NRW7 AC233702.2-202ENST00000562547 291 ntBASIC2.54□□□□□ -2
VPS45Q9NRW7 SNORD11B-201ENST00000607707 90 ntBASIC2.54□□□□□ -2
VPS45Q9NRW7 MIR8062-201ENST00000621515 85 ntBASIC2.54□□□□□ -2
VPS45Q9NRW7 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
VPS45Q9NRW7 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.53□□□□□ -2
VPS45Q9NRW7 Y_RNA.64-201ENST00000362845 102 ntBASIC2.53□□□□□ -2
VPS45Q9NRW7 RNU6-727P-201ENST00000363592 107 ntBASIC2.53□□□□□ -2
VPS45Q9NRW7 Y_RNA.222-201ENST00000364264 102 ntBASIC2.53□□□□□ -2
VPS45Q9NRW7 RNU6-806P-201ENST00000365147 105 ntBASIC2.53□□□□□ -2
VPS45Q9NRW7 RNU1-138P-201ENST00000384093 164 ntBASIC2.53□□□□□ -2
VPS45Q9NRW7 SNORD63-201ENST00000384262 68 ntBASIC2.53□□□□□ -2
VPS45Q9NRW7 Y_RNA.462-201ENST00000384268 102 ntBASIC2.53□□□□□ -2
VPS45Q9NRW7 MIR764-201ENST00000390811 85 ntBASIC2.53□□□□□ -2
VPS45Q9NRW7 AL033519.2-201ENST00000403958 392 ntBASIC2.53□□□□□ -2
VPS45Q9NRW7 AL357139.1-201ENST00000407792 426 ntBASIC2.53□□□□□ -2
VPS45Q9NRW7 AC004866.1-201ENST00000411748 78 ntBASIC2.53□□□□□ -2
VPS45Q9NRW7 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.53□□□□□ -2
VPS45Q9NRW7 AL137159.1-201ENST00000452808 512 ntBASIC2.53□□□□□ -2
VPS45Q9NRW7 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.53□□□□□ -2
VPS45Q9NRW7 RNU6-408P-201ENST00000515910 100 ntBASIC2.53□□□□□ -2
VPS45Q9NRW7 RNU6-991P-201ENST00000516168 107 ntBASIC2.53□□□□□ -2
VPS45Q9NRW7 RNU6-548P-201ENST00000517083 115 ntBASIC2.53□□□□□ -2
VPS45Q9NRW7 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.53□□□□□ -2
VPS45Q9NRW7 AP003733.2-201ENST00000529409 171 ntBASIC2.53□□□□□ -2
VPS45Q9NRW7 RRN3P3-201ENST00000549207 578 ntBASIC2.53□□□□□ -2
VPS45Q9NRW7 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.53□□□□□ -2
VPS45Q9NRW7 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.53□□□□□ -2
VPS45Q9NRW7 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.53□□□□□ -2
VPS45Q9NRW7 AL357075.2-201ENST00000614906 189 ntBASIC2.53□□□□□ -2
VPS45Q9NRW7 MIR376A1-201ENST00000616574 68 ntBASIC2.53□□□□□ -2
VPS45Q9NRW7 U6.104-201ENST00000637979 90 ntBASIC2.53□□□□□ -2
VPS45Q9NRW7 Y_RNA.26-201ENST00000362539 101 ntBASIC2.52□□□□□ -2.01
VPS45Q9NRW7 Y_RNA.105-201ENST00000363182 111 ntBASIC2.52□□□□□ -2.01
VPS45Q9NRW7 MIR518C-201ENST00000384822 101 ntBASIC2.52□□□□□ -2.01
VPS45Q9NRW7 SNORD115-46-201ENST00000390982 71 ntBASIC2.52□□□□□ -2.01
VPS45Q9NRW7 RNA5SP270-201ENST00000411361 118 ntBASIC2.52□□□□□ -2.01
VPS45Q9NRW7 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.52□□□□□ -2.01
VPS45Q9NRW7 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.52□□□□□ -2.01
VPS45Q9NRW7 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.52□□□□□ -2.01
VPS45Q9NRW7 RNU5F-4P-201ENST00000516581 114 ntBASIC2.52□□□□□ -2.01
VPS45Q9NRW7 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.52□□□□□ -2.01
VPS45Q9NRW7 AC136932.1-201ENST00000574771 208 ntBASIC2.52□□□□□ -2.01
VPS45Q9NRW7 MIR1273D-201ENST00000577266 86 ntBASIC2.52□□□□□ -2.01
VPS45Q9NRW7 MIR4300-201ENST00000581016 96 ntBASIC2.52□□□□□ -2.01
VPS45Q9NRW7 MIR5194-201ENST00000582634 120 ntBASIC2.52□□□□□ -2.01
VPS45Q9NRW7 AL137847.3-201ENST00000611521 109 ntBASIC2.52□□□□□ -2.01
VPS45Q9NRW7 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.52□□□□□ -2.01
VPS45Q9NRW7 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.52□□□□□ -2.01
VPS45Q9NRW7 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
VPS45Q9NRW7 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
VPS45Q9NRW7 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
VPS45Q9NRW7 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
VPS45Q9NRW7 Y_RNA.99-201ENST00000363138 105 ntBASIC2.51□□□□□ -2.01
VPS45Q9NRW7 Y_RNA.193-201ENST00000363979 102 ntBASIC2.51□□□□□ -2.01
VPS45Q9NRW7 SNORA3A-201ENST00000364113 130 ntBASIC2.51□□□□□ -2.01
VPS45Q9NRW7 SNORD114-30-201ENST00000364448 72 ntBASIC2.51□□□□□ -2.01
VPS45Q9NRW7 RNU1-91P-201ENST00000364746 163 ntBASIC2.51□□□□□ -2.01
VPS45Q9NRW7 RNU6-702P-201ENST00000364982 107 ntBASIC2.51□□□□□ -2.01
VPS45Q9NRW7 Y_RNA.498-201ENST00000384460 102 ntBASIC2.51□□□□□ -2.01
VPS45Q9NRW7 MIR1302-6-201ENST00000408466 90 ntBASIC2.51□□□□□ -2.01
VPS45Q9NRW7 RNU6-121P-201ENST00000410525 99 ntBASIC2.51□□□□□ -2.01
VPS45Q9NRW7 RNU5A-5P-201ENST00000411054 116 ntBASIC2.51□□□□□ -2.01
VPS45Q9NRW7 AC005002.2-201ENST00000438228 269 ntBASIC2.51□□□□□ -2.01
VPS45Q9NRW7 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.51□□□□□ -2.01
VPS45Q9NRW7 RNU6-625P-201ENST00000459412 107 ntBASIC2.51□□□□□ -2.01
VPS45Q9NRW7 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.51□□□□□ -2.01
VPS45Q9NRW7 SNORA4.4-201ENST00000515921 135 ntBASIC2.51□□□□□ -2.01
VPS45Q9NRW7 RNU6-1098P-201ENST00000516772 96 ntBASIC2.51□□□□□ -2.01
VPS45Q9NRW7 AK6P2-201ENST00000549020 471 ntBASIC2.51□□□□□ -2.01
VPS45Q9NRW7 AC018448.1-201ENST00000552843 316 ntBASIC2.51□□□□□ -2.01
VPS45Q9NRW7 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.51□□□□□ -2.01
VPS45Q9NRW7 AC068205.3-201ENST00000636385 468 ntBASIC2.51□□□□□ -2.01
VPS45Q9NRW7 RNU6-626P-201ENST00000363354 107 ntBASIC2.5□□□□□ -2.01
VPS45Q9NRW7 RNU6-961P-201ENST00000363893 105 ntBASIC2.5□□□□□ -2.01
VPS45Q9NRW7 Y_RNA.230-201ENST00000364348 109 ntBASIC2.5□□□□□ -2.01
VPS45Q9NRW7 RNU6-234P-201ENST00000365229 104 ntBASIC2.5□□□□□ -2.01
VPS45Q9NRW7 Y_RNA.401-201ENST00000383965 117 ntBASIC2.5□□□□□ -2.01
VPS45Q9NRW7 Y_RNA.415-201ENST00000384012 112 ntBASIC2.5□□□□□ -2.01
VPS45Q9NRW7 Y_RNA.461-201ENST00000384263 103 ntBASIC2.5□□□□□ -2.01
VPS45Q9NRW7 RNU6-937P-201ENST00000384325 106 ntBASIC2.5□□□□□ -2.01
VPS45Q9NRW7 SNORA80E-201ENST00000384744 137 ntBASIC2.5□□□□□ -2.01
VPS45Q9NRW7 ELOCP21-201ENST00000412558 336 ntBASIC2.5□□□□□ -2.01
VPS45Q9NRW7 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.5□□□□□ -2.01
VPS45Q9NRW7 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.5□□□□□ -2.01
VPS45Q9NRW7 HMGN2P3-201ENST00000433603 273 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms