Protein–RNA interactions for Protein: Q9NQT5

EXOSC3, Exosome complex component RRP40, humanhuman

Known RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3Q9NQT5 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.4□□□□□ -2.19
EXOSC3Q9NQT5 CST2P1-201ENST00000425770 87 ntBASIC1.4□□□□□ -2.19
EXOSC3Q9NQT5 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.4□□□□□ -2.19
EXOSC3Q9NQT5 RNU6-221P-201ENST00000459541 99 ntBASIC1.4□□□□□ -2.19
EXOSC3Q9NQT5 AC116353.2-201ENST00000505332 712 ntBASIC1.4□□□□□ -2.19
EXOSC3Q9NQT5 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.4□□□□□ -2.19
EXOSC3Q9NQT5 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.4□□□□□ -2.19
EXOSC3Q9NQT5 RNU6-107P-201ENST00000516643 102 ntBASIC1.4□□□□□ -2.19
EXOSC3Q9NQT5 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.4□□□□□ -2.19
EXOSC3Q9NQT5 AC091144.1-201ENST00000519573 138 ntBASIC1.4□□□□□ -2.19
EXOSC3Q9NQT5 AC105029.1-201ENST00000520250 669 ntBASIC1.4□□□□□ -2.19
EXOSC3Q9NQT5 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.4□□□□□ -2.19
EXOSC3Q9NQT5 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.4□□□□□ -2.19
EXOSC3Q9NQT5 AC116312.1-201ENST00000606841 314 ntBASIC1.4□□□□□ -2.19
EXOSC3Q9NQT5 MIR1244-1-201ENST00000612829 85 ntBASIC1.4□□□□□ -2.19
EXOSC3Q9NQT5 MIR1244-3-201ENST00000635744 85 ntBASIC1.4□□□□□ -2.19
EXOSC3Q9NQT5 MIR1244-2-201ENST00000636449 85 ntBASIC1.4□□□□□ -2.19
EXOSC3Q9NQT5 MIR1244-4-202ENST00000636813 85 ntBASIC1.4□□□□□ -2.19
EXOSC3Q9NQT5 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.39□□□□□ -2.19
EXOSC3Q9NQT5 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.39□□□□□ -2.19
EXOSC3Q9NQT5 MIR424-201ENST00000362227 98 ntBASIC1.39□□□□□ -2.19
EXOSC3Q9NQT5 RNU6-661P-201ENST00000362409 107 ntBASIC1.39□□□□□ -2.19
EXOSC3Q9NQT5 RNA5SP361-201ENST00000362686 118 ntBASIC1.39□□□□□ -2.19
EXOSC3Q9NQT5 U3.8-201ENST00000363675 217 ntBASIC1.39□□□□□ -2.19
EXOSC3Q9NQT5 Y_RNA.358-201ENST00000365491 99 ntBASIC1.39□□□□□ -2.19
EXOSC3Q9NQT5 Y_RNA.364-201ENST00000365532 101 ntBASIC1.39□□□□□ -2.19
EXOSC3Q9NQT5 Y_RNA.557-201ENST00000384680 107 ntBASIC1.39□□□□□ -2.19
EXOSC3Q9NQT5 SNORA67.5-201ENST00000391036 107 ntBASIC1.39□□□□□ -2.19
EXOSC3Q9NQT5 Y_RNA.646-201ENST00000410980 101 ntBASIC1.39□□□□□ -2.19
EXOSC3Q9NQT5 MTCYBP10-201ENST00000424905 650 ntBASIC1.39□□□□□ -2.19
EXOSC3Q9NQT5 EIF1P2-201ENST00000428233 350 ntBASIC1.39□□□□□ -2.19
EXOSC3Q9NQT5 AC005908.1-201ENST00000468701 347 ntBASIC1.39□□□□□ -2.19
EXOSC3Q9NQT5 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.39□□□□□ -2.19
EXOSC3Q9NQT5 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.39□□□□□ -2.19
EXOSC3Q9NQT5 Y_RNA.683-201ENST00000516508 93 ntBASIC1.39□□□□□ -2.19
EXOSC3Q9NQT5 AL121579.1-201ENST00000555129 305 ntBASIC1.39□□□□□ -2.19
EXOSC3Q9NQT5 HSBP1P1-201ENST00000555205 166 ntBASIC1.39□□□□□ -2.19
EXOSC3Q9NQT5 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.39□□□□□ -2.19
EXOSC3Q9NQT5 AC004584.2-201ENST00000570407 410 ntBASIC1.39□□□□□ -2.19
EXOSC3Q9NQT5 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.39□□□□□ -2.19
EXOSC3Q9NQT5 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.39□□□□□ -2.19
EXOSC3Q9NQT5 AL355073.2-201ENST00000612106 557 ntBASIC1.39□□□□□ -2.19
EXOSC3Q9NQT5 AC092794.2-201ENST00000620933 563 ntBASIC1.39□□□□□ -2.19
EXOSC3Q9NQT5 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
EXOSC3Q9NQT5 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
EXOSC3Q9NQT5 RNU5F-3P-201ENST00000363767 117 ntBASIC1.38□□□□□ -2.19
EXOSC3Q9NQT5 RNU6-879P-201ENST00000364328 108 ntBASIC1.38□□□□□ -2.19
EXOSC3Q9NQT5 RNU6-99P-201ENST00000364721 107 ntBASIC1.38□□□□□ -2.19
EXOSC3Q9NQT5 RNU4-42P-201ENST00000364738 142 ntBASIC1.38□□□□□ -2.19
EXOSC3Q9NQT5 RNU6-1240P-201ENST00000365155 104 ntBASIC1.38□□□□□ -2.19
EXOSC3Q9NQT5 MIR320A-201ENST00000385302 82 ntBASIC1.38□□□□□ -2.19
EXOSC3Q9NQT5 MIR1185-2-201ENST00000408687 86 ntBASIC1.38□□□□□ -2.19
EXOSC3Q9NQT5 AC008134.1-201ENST00000420943 193 ntBASIC1.38□□□□□ -2.19
EXOSC3Q9NQT5 AC073910.1-201ENST00000445047 438 ntBASIC1.38□□□□□ -2.19
EXOSC3Q9NQT5 HMGN1P13-201ENST00000505795 138 ntBASIC1.38□□□□□ -2.19
EXOSC3Q9NQT5 RNU6-1146P-201ENST00000516282 102 ntBASIC1.38□□□□□ -2.19
EXOSC3Q9NQT5 Y_RNA.675-201ENST00000516389 149 ntBASIC1.38□□□□□ -2.19
EXOSC3Q9NQT5 AC022868.1-201ENST00000517767 391 ntBASIC1.38□□□□□ -2.19
EXOSC3Q9NQT5 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
EXOSC3Q9NQT5 FRG2DP-202ENST00000566967 323 ntBASIC1.38□□□□□ -2.19
EXOSC3Q9NQT5 AC090617.3-201ENST00000573670 475 ntBASIC1.38□□□□□ -2.19
EXOSC3Q9NQT5 SNORD53B-201ENST00000577887 78 ntBASIC1.38□□□□□ -2.19
EXOSC3Q9NQT5 AC005730.3-201ENST00000583067 366 ntBASIC1.38□□□□□ -2.19
EXOSC3Q9NQT5 AC005899.2-201ENST00000584353 90 ntBASIC1.38□□□□□ -2.19
EXOSC3Q9NQT5 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.38□□□□□ -2.19
EXOSC3Q9NQT5 AL357075.2-201ENST00000614906 189 ntBASIC1.38□□□□□ -2.19
EXOSC3Q9NQT5 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
EXOSC3Q9NQT5 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.37□□□□□ -2.19
EXOSC3Q9NQT5 RNU6-1188P-201ENST00000363795 107 ntBASIC1.37□□□□□ -2.19
EXOSC3Q9NQT5 SNORA63D-201ENST00000364359 132 ntBASIC1.37□□□□□ -2.19
EXOSC3Q9NQT5 SNORA4.2-201ENST00000365313 147 ntBASIC1.37□□□□□ -2.19
EXOSC3Q9NQT5 Y_RNA.474-201ENST00000384341 102 ntBASIC1.37□□□□□ -2.19
EXOSC3Q9NQT5 RNU6-310P-201ENST00000384655 107 ntBASIC1.37□□□□□ -2.19
EXOSC3Q9NQT5 MIR30A-201ENST00000385092 71 ntBASIC1.37□□□□□ -2.19
EXOSC3Q9NQT5 RNA5SP323-201ENST00000391094 133 ntBASIC1.37□□□□□ -2.19
EXOSC3Q9NQT5 RN7SKP51-201ENST00000410781 304 ntBASIC1.37□□□□□ -2.19
EXOSC3Q9NQT5 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.37□□□□□ -2.19
EXOSC3Q9NQT5 MTND4P18-201ENST00000447010 465 ntBASIC1.37□□□□□ -2.19
EXOSC3Q9NQT5 NDUFB4P10-201ENST00000452541 359 ntBASIC1.37□□□□□ -2.19
EXOSC3Q9NQT5 RPL17P19-201ENST00000489069 552 ntBASIC1.37□□□□□ -2.19
EXOSC3Q9NQT5 RNU6-548P-201ENST00000517083 115 ntBASIC1.37□□□□□ -2.19
EXOSC3Q9NQT5 SNORA31.24-201ENST00000517232 57 ntBASIC1.37□□□□□ -2.19
EXOSC3Q9NQT5 AC027419.1-201ENST00000522976 328 ntBASIC1.37□□□□□ -2.19
EXOSC3Q9NQT5 APOOP3-201ENST00000536787 586 ntBASIC1.37□□□□□ -2.19
EXOSC3Q9NQT5 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
EXOSC3Q9NQT5 AC016925.2-201ENST00000605108 242 ntBASIC1.37□□□□□ -2.19
EXOSC3Q9NQT5 MIR8074-201ENST00000615081 81 ntBASIC1.37□□□□□ -2.19
EXOSC3Q9NQT5 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.36□□□□□ -2.19
EXOSC3Q9NQT5 RNU6-414P-201ENST00000363705 104 ntBASIC1.36□□□□□ -2.19
EXOSC3Q9NQT5 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.36□□□□□ -2.19
EXOSC3Q9NQT5 MIR329-1-201ENST00000385028 80 ntBASIC1.36□□□□□ -2.19
EXOSC3Q9NQT5 SNORA67.6-201ENST00000391093 99 ntBASIC1.36□□□□□ -2.19
EXOSC3Q9NQT5 MIR1304-201ENST00000408243 91 ntBASIC1.36□□□□□ -2.19
EXOSC3Q9NQT5 EBAG9P1-201ENST00000418955 543 ntBASIC1.36□□□□□ -2.19
EXOSC3Q9NQT5 AC005002.2-201ENST00000438228 269 ntBASIC1.36□□□□□ -2.19
EXOSC3Q9NQT5 UQCRBP2-201ENST00000447827 297 ntBASIC1.36□□□□□ -2.19
EXOSC3Q9NQT5 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.36□□□□□ -2.19
EXOSC3Q9NQT5 SNORD13-201ENST00000459299 104 ntBASIC1.36□□□□□ -2.19
EXOSC3Q9NQT5 AC023790.1-201ENST00000482174 347 ntBASIC1.36□□□□□ -2.19
EXOSC3Q9NQT5 RPL36AP21-201ENST00000490372 323 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms