Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 RNY3P11-201ENST00000364153 102 ntBASIC2.21□□□□□ -2.06
DDX4Q9NQI0 SNORA16B-201ENST00000364674 135 ntBASIC2.21□□□□□ -2.06
DDX4Q9NQI0 RNU6-438P-201ENST00000365561 103 ntBASIC2.21□□□□□ -2.06
DDX4Q9NQI0 Y_RNA.422-201ENST00000384054 114 ntBASIC2.21□□□□□ -2.06
DDX4Q9NQI0 MIR549A-201ENST00000385268 96 ntBASIC2.21□□□□□ -2.06
DDX4Q9NQI0 Y_RNA.595-201ENST00000410403 105 ntBASIC2.21□□□□□ -2.06
DDX4Q9NQI0 RNU6-1001P-201ENST00000411265 100 ntBASIC2.21□□□□□ -2.06
DDX4Q9NQI0 AC074290.1-201ENST00000448883 135 ntBASIC2.21□□□□□ -2.06
DDX4Q9NQI0 AC114982.1-201ENST00000469402 321 ntBASIC2.21□□□□□ -2.06
DDX4Q9NQI0 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.21□□□□□ -2.06
DDX4Q9NQI0 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.21□□□□□ -2.06
DDX4Q9NQI0 ANP32BP3-201ENST00000559213 706 ntBASIC2.21□□□□□ -2.06
DDX4Q9NQI0 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.21□□□□□ -2.06
DDX4Q9NQI0 AC026271.5-201ENST00000577873 130 ntBASIC2.21□□□□□ -2.06
DDX4Q9NQI0 AC002984.1-201ENST00000591692 448 ntBASIC2.21□□□□□ -2.06
DDX4Q9NQI0 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.21□□□□□ -2.06
DDX4Q9NQI0 AC008873.1-201ENST00000625051 138 ntBASIC2.21□□□□□ -2.06
DDX4Q9NQI0 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.21□□□□□ -2.06
DDX4Q9NQI0 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
DDX4Q9NQI0 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
DDX4Q9NQI0 AL359851.1-201ENST00000569460 4997 ntBASIC2.2□□□□□ -2.06
DDX4Q9NQI0 MIR586-201ENST00000385035 97 ntBASIC2.2□□□□□ -2.06
DDX4Q9NQI0 SNORD78.2-201ENST00000391076 69 ntBASIC2.2□□□□□ -2.06
DDX4Q9NQI0 MRPL42P3-201ENST00000401492 326 ntBASIC2.2□□□□□ -2.06
DDX4Q9NQI0 EDDM3CP-201ENST00000415977 425 ntBASIC2.2□□□□□ -2.06
DDX4Q9NQI0 AL445305.1-201ENST00000432577 575 ntBASIC2.2□□□□□ -2.06
DDX4Q9NQI0 AC245102.2-201ENST00000448956 180 ntBASIC2.2□□□□□ -2.06
DDX4Q9NQI0 CHEK2P4-201ENST00000450340 246 ntBASIC2.2□□□□□ -2.06
DDX4Q9NQI0 AL137159.1-201ENST00000452808 512 ntBASIC2.2□□□□□ -2.06
DDX4Q9NQI0 U8.22-201ENST00000459141 133 ntBASIC2.2□□□□□ -2.06
DDX4Q9NQI0 Y_RNA.721-201ENST00000517207 102 ntBASIC2.2□□□□□ -2.06
DDX4Q9NQI0 MIR5188-201ENST00000583467 113 ntBASIC2.2□□□□□ -2.06
DDX4Q9NQI0 MIR4753-201ENST00000585119 83 ntBASIC2.2□□□□□ -2.06
DDX4Q9NQI0 AC016925.2-201ENST00000605108 242 ntBASIC2.2□□□□□ -2.06
DDX4Q9NQI0 SNORD58B-201ENST00000607313 66 ntBASIC2.2□□□□□ -2.06
DDX4Q9NQI0 AC084768.2-201ENST00000622736 221 ntBASIC2.2□□□□□ -2.06
DDX4Q9NQI0 AC068205.3-201ENST00000636385 468 ntBASIC2.2□□□□□ -2.06
DDX4Q9NQI0 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
DDX4Q9NQI0 MTND5P35-201ENST00000557537 1720 ntBASIC2.2□□□□□ -2.06
DDX4Q9NQI0 SNORA33.2-201ENST00000365413 134 ntBASIC2.19□□□□□ -2.06
DDX4Q9NQI0 Y_RNA.424-201ENST00000384063 103 ntBASIC2.19□□□□□ -2.06
DDX4Q9NQI0 RNU6-1145P-201ENST00000384246 107 ntBASIC2.19□□□□□ -2.06
DDX4Q9NQI0 MIR329-1-201ENST00000385028 80 ntBASIC2.19□□□□□ -2.06
DDX4Q9NQI0 AL627390.1-201ENST00000396055 340 ntBASIC2.19□□□□□ -2.06
DDX4Q9NQI0 AL590004.1-201ENST00000405321 300 ntBASIC2.19□□□□□ -2.06
DDX4Q9NQI0 MIR1283-1-201ENST00000408494 87 ntBASIC2.19□□□□□ -2.06
DDX4Q9NQI0 AC004866.1-201ENST00000411748 78 ntBASIC2.19□□□□□ -2.06
DDX4Q9NQI0 AC108667.1-201ENST00000428618 249 ntBASIC2.19□□□□□ -2.06
DDX4Q9NQI0 AC096644.2-201ENST00000429278 159 ntBASIC2.19□□□□□ -2.06
DDX4Q9NQI0 NDUFB4P10-201ENST00000452541 359 ntBASIC2.19□□□□□ -2.06
DDX4Q9NQI0 PRELID3BP1-201ENST00000457142 540 ntBASIC2.19□□□□□ -2.06
DDX4Q9NQI0 AC016925.1-201ENST00000458303 298 ntBASIC2.19□□□□□ -2.06
DDX4Q9NQI0 RNU6-717P-201ENST00000459076 104 ntBASIC2.19□□□□□ -2.06
DDX4Q9NQI0 SNORD13-201ENST00000459299 104 ntBASIC2.19□□□□□ -2.06
DDX4Q9NQI0 AC055731.1-201ENST00000474387 401 ntBASIC2.19□□□□□ -2.06
DDX4Q9NQI0 AC091179.3-201ENST00000474761 144 ntBASIC2.19□□□□□ -2.06
DDX4Q9NQI0 ATP5EP1-201ENST00000510257 156 ntBASIC2.19□□□□□ -2.06
DDX4Q9NQI0 AC074133.1-201ENST00000515696 183 ntBASIC2.19□□□□□ -2.06
DDX4Q9NQI0 AP003072.1-201ENST00000531740 145 ntBASIC2.19□□□□□ -2.06
DDX4Q9NQI0 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.19□□□□□ -2.06
DDX4Q9NQI0 RPS29P30-201ENST00000600975 111 ntBASIC2.19□□□□□ -2.06
DDX4Q9NQI0 Y_RNA.812-201ENST00000610788 101 ntBASIC2.19□□□□□ -2.06
DDX4Q9NQI0 Y_RNA.784-201ENST00000613803 101 ntBASIC2.19□□□□□ -2.06
DDX4Q9NQI0 Y_RNA.787-201ENST00000616522 101 ntBASIC2.19□□□□□ -2.06
DDX4Q9NQI0 Y_RNA.780-201ENST00000617336 101 ntBASIC2.19□□□□□ -2.06
DDX4Q9NQI0 Y_RNA.801-201ENST00000619005 101 ntBASIC2.19□□□□□ -2.06
DDX4Q9NQI0 SDR42E1P4-201ENST00000620894 481 ntBASIC2.19□□□□□ -2.06
DDX4Q9NQI0 AC009487.4-201ENST00000624969 3585 ntBASIC2.18□□□□□ -2.06
DDX4Q9NQI0 Y_RNA.99-201ENST00000363138 105 ntBASIC2.18□□□□□ -2.06
DDX4Q9NQI0 Y_RNA.158-201ENST00000363651 101 ntBASIC2.18□□□□□ -2.06
DDX4Q9NQI0 RNU6-743P-201ENST00000364151 106 ntBASIC2.18□□□□□ -2.06
DDX4Q9NQI0 RNU4-50P-201ENST00000364361 141 ntBASIC2.18□□□□□ -2.06
DDX4Q9NQI0 Y_RNA.326-201ENST00000365176 113 ntBASIC2.18□□□□□ -2.06
DDX4Q9NQI0 RNU6-639P-201ENST00000384074 107 ntBASIC2.18□□□□□ -2.06
DDX4Q9NQI0 MIR676-201ENST00000390702 67 ntBASIC2.18□□□□□ -2.06
DDX4Q9NQI0 AL033519.2-201ENST00000403958 392 ntBASIC2.18□□□□□ -2.06
DDX4Q9NQI0 RNA5SP338-201ENST00000410495 85 ntBASIC2.18□□□□□ -2.06
DDX4Q9NQI0 SDAD1P3-201ENST00000427380 333 ntBASIC2.18□□□□□ -2.06
DDX4Q9NQI0 FCF1P4-201ENST00000448326 183 ntBASIC2.18□□□□□ -2.06
DDX4Q9NQI0 HMGN2P18-201ENST00000450680 270 ntBASIC2.18□□□□□ -2.06
DDX4Q9NQI0 AC079804.2-201ENST00000490376 200 ntBASIC2.18□□□□□ -2.06
DDX4Q9NQI0 AC093259.1-201ENST00000509755 300 ntBASIC2.18□□□□□ -2.06
DDX4Q9NQI0 SNORA4.4-201ENST00000515921 135 ntBASIC2.18□□□□□ -2.06
DDX4Q9NQI0 SNORA31.25-201ENST00000517242 134 ntBASIC2.18□□□□□ -2.06
DDX4Q9NQI0 AC022616.4-201ENST00000522985 181 ntBASIC2.18□□□□□ -2.06
DDX4Q9NQI0 RRN3P3-201ENST00000549207 578 ntBASIC2.18□□□□□ -2.06
DDX4Q9NQI0 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.18□□□□□ -2.06
DDX4Q9NQI0 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
DDX4Q9NQI0 RNA5SP361-201ENST00000362686 118 ntBASIC2.17□□□□□ -2.06
DDX4Q9NQI0 Y_RNA.132-201ENST00000363421 102 ntBASIC2.17□□□□□ -2.06
DDX4Q9NQI0 RNA5SP190-201ENST00000365222 118 ntBASIC2.17□□□□□ -2.06
DDX4Q9NQI0 Y_RNA.332-201ENST00000365271 113 ntBASIC2.17□□□□□ -2.06
DDX4Q9NQI0 SNORA63.7-201ENST00000365579 123 ntBASIC2.17□□□□□ -2.06
DDX4Q9NQI0 SNORD14.1-201ENST00000365609 90 ntBASIC2.17□□□□□ -2.06
DDX4Q9NQI0 RNU6-318P-201ENST00000384283 103 ntBASIC2.17□□□□□ -2.06
DDX4Q9NQI0 SNORD12B-201ENST00000410433 91 ntBASIC2.17□□□□□ -2.06
DDX4Q9NQI0 UQCRBP2-201ENST00000447827 297 ntBASIC2.17□□□□□ -2.06
DDX4Q9NQI0 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.17□□□□□ -2.06
DDX4Q9NQI0 RNU2-34P-201ENST00000516534 121 ntBASIC2.17□□□□□ -2.06
DDX4Q9NQI0 RNA5SP137-201ENST00000516833 135 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms