Protein–RNA interactions for Protein: Q9NPD3

EXOSC4, Exosome complex component RRP41, humanhuman

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4Q9NPD3 AC008873.1-201ENST00000625051 138 ntBASIC0.95□□□□□ -2.26
EXOSC4Q9NPD3 AC100810.6-201ENST00000638068 285 ntBASIC0.95□□□□□ -2.26
EXOSC4Q9NPD3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.95□□□□□ -2.26
EXOSC4Q9NPD3 Y_RNA.48-201ENST00000362710 103 ntBASIC0.94□□□□□ -2.26
EXOSC4Q9NPD3 RNU6-534P-201ENST00000364877 106 ntBASIC0.94□□□□□ -2.26
EXOSC4Q9NPD3 SNORA72.2-201ENST00000365028 127 ntBASIC0.94□□□□□ -2.26
EXOSC4Q9NPD3 RNA5SP259-201ENST00000365541 109 ntBASIC0.94□□□□□ -2.26
EXOSC4Q9NPD3 Y_RNA.402-201ENST00000383972 102 ntBASIC0.94□□□□□ -2.26
EXOSC4Q9NPD3 RNU6-245P-201ENST00000384020 107 ntBASIC0.94□□□□□ -2.26
EXOSC4Q9NPD3 RNU6-831P-201ENST00000384548 107 ntBASIC0.94□□□□□ -2.26
EXOSC4Q9NPD3 MIR153-2-201ENST00000385225 87 ntBASIC0.94□□□□□ -2.26
EXOSC4Q9NPD3 DAP3P1-201ENST00000441522 278 ntBASIC0.94□□□□□ -2.26
EXOSC4Q9NPD3 MTATP6P26-201ENST00000445926 662 ntBASIC0.94□□□□□ -2.26
EXOSC4Q9NPD3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.94□□□□□ -2.26
EXOSC4Q9NPD3 AC091179.3-201ENST00000474761 144 ntBASIC0.94□□□□□ -2.26
EXOSC4Q9NPD3 AC093852.1-201ENST00000503587 266 ntBASIC0.94□□□□□ -2.26
EXOSC4Q9NPD3 RNU1-142P-201ENST00000516682 145 ntBASIC0.94□□□□□ -2.26
EXOSC4Q9NPD3 RNA5SP404-201ENST00000517118 132 ntBASIC0.94□□□□□ -2.26
EXOSC4Q9NPD3 AC027419.1-201ENST00000522976 328 ntBASIC0.94□□□□□ -2.26
EXOSC4Q9NPD3 AC109635.3-201ENST00000529536 185 ntBASIC0.94□□□□□ -2.26
EXOSC4Q9NPD3 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.94□□□□□ -2.26
EXOSC4Q9NPD3 AL512310.8-201ENST00000550183 120 ntBASIC0.94□□□□□ -2.26
EXOSC4Q9NPD3 MZT1P2-201ENST00000604387 248 ntBASIC0.94□□□□□ -2.26
EXOSC4Q9NPD3 AC012557.2-201ENST00000605919 418 ntBASIC0.94□□□□□ -2.26
EXOSC4Q9NPD3 AC021506.2-201ENST00000612354 169 ntBASIC0.94□□□□□ -2.26
EXOSC4Q9NPD3 AC015540.1-201ENST00000615828 501 ntBASIC0.94□□□□□ -2.26
EXOSC4Q9NPD3 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
EXOSC4Q9NPD3 AL391987.6-201ENST00000305671 199 ntBASIC0.93□□□□□ -2.26
EXOSC4Q9NPD3 SNORD115-32-201ENST00000364079 82 ntBASIC0.93□□□□□ -2.26
EXOSC4Q9NPD3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
EXOSC4Q9NPD3 MIR1185-2-201ENST00000408687 86 ntBASIC0.93□□□□□ -2.26
EXOSC4Q9NPD3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.93□□□□□ -2.26
EXOSC4Q9NPD3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.93□□□□□ -2.26
EXOSC4Q9NPD3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.93□□□□□ -2.26
EXOSC4Q9NPD3 MIR4273-201ENST00000582824 84 ntBASIC0.93□□□□□ -2.26
EXOSC4Q9NPD3 AP000942.3-201ENST00000603702 160 ntBASIC0.93□□□□□ -2.26
EXOSC4Q9NPD3 RNY4P14-201ENST00000363656 96 ntBASIC0.92□□□□□ -2.26
EXOSC4Q9NPD3 Y_RNA.405-201ENST00000383979 100 ntBASIC0.92□□□□□ -2.26
EXOSC4Q9NPD3 Y_RNA.451-201ENST00000384200 100 ntBASIC0.92□□□□□ -2.26
EXOSC4Q9NPD3 RNU6-17P-201ENST00000384245 107 ntBASIC0.92□□□□□ -2.26
EXOSC4Q9NPD3 RNU6-18P-201ENST00000384527 107 ntBASIC0.92□□□□□ -2.26
EXOSC4Q9NPD3 Y_RNA.524-201ENST00000384564 100 ntBASIC0.92□□□□□ -2.26
EXOSC4Q9NPD3 Y_RNA.561-201ENST00000384694 100 ntBASIC0.92□□□□□ -2.26
EXOSC4Q9NPD3 RNU6-159P-201ENST00000391080 106 ntBASIC0.92□□□□□ -2.26
EXOSC4Q9NPD3 AC008134.1-201ENST00000420943 193 ntBASIC0.92□□□□□ -2.26
EXOSC4Q9NPD3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.92□□□□□ -2.26
EXOSC4Q9NPD3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.92□□□□□ -2.26
EXOSC4Q9NPD3 AP000870.1-201ENST00000472927 406 ntBASIC0.92□□□□□ -2.26
EXOSC4Q9NPD3 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.92□□□□□ -2.26
EXOSC4Q9NPD3 RNU7-40P-201ENST00000516397 64 ntBASIC0.92□□□□□ -2.26
EXOSC4Q9NPD3 RNU6-1198P-201ENST00000516904 67 ntBASIC0.92□□□□□ -2.26
EXOSC4Q9NPD3 RNU6-1314P-201ENST00000517139 104 ntBASIC0.92□□□□□ -2.26
EXOSC4Q9NPD3 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.92□□□□□ -2.26
EXOSC4Q9NPD3 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.92□□□□□ -2.26
EXOSC4Q9NPD3 MIR5696-201ENST00000578474 85 ntBASIC0.92□□□□□ -2.26
EXOSC4Q9NPD3 AL359075.3-201ENST00000613288 217 ntBASIC0.92□□□□□ -2.26
EXOSC4Q9NPD3 AC040896.1-201ENST00000613819 479 ntBASIC0.92□□□□□ -2.26
EXOSC4Q9NPD3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
EXOSC4Q9NPD3 Y_RNA.3-201ENST00000362331 103 ntBASIC0.91□□□□□ -2.26
EXOSC4Q9NPD3 Y_RNA.89-201ENST00000363031 102 ntBASIC0.91□□□□□ -2.26
EXOSC4Q9NPD3 Y_RNA.318-201ENST00000365131 97 ntBASIC0.91□□□□□ -2.26
EXOSC4Q9NPD3 RNU4-12P-201ENST00000365233 139 ntBASIC0.91□□□□□ -2.26
EXOSC4Q9NPD3 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.91□□□□□ -2.26
EXOSC4Q9NPD3 Y_RNA.473-201ENST00000384333 102 ntBASIC0.91□□□□□ -2.26
EXOSC4Q9NPD3 MIR515-2-201ENST00000384883 83 ntBASIC0.91□□□□□ -2.26
EXOSC4Q9NPD3 MIR515-1-201ENST00000384884 83 ntBASIC0.91□□□□□ -2.26
EXOSC4Q9NPD3 MIR10B-201ENST00000385011 110 ntBASIC0.91□□□□□ -2.26
EXOSC4Q9NPD3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
EXOSC4Q9NPD3 RPL37P10-201ENST00000412884 288 ntBASIC0.91□□□□□ -2.26
EXOSC4Q9NPD3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.91□□□□□ -2.26
EXOSC4Q9NPD3 AC243428.1-201ENST00000421099 264 ntBASIC0.91□□□□□ -2.26
EXOSC4Q9NPD3 SNX2P2-201ENST00000424553 323 ntBASIC0.91□□□□□ -2.26
EXOSC4Q9NPD3 USP9YP30-201ENST00000430729 455 ntBASIC0.91□□□□□ -2.26
EXOSC4Q9NPD3 RPS23P4-201ENST00000487908 423 ntBASIC0.91□□□□□ -2.26
EXOSC4Q9NPD3 RNU7-128P-201ENST00000517247 62 ntBASIC0.91□□□□□ -2.26
EXOSC4Q9NPD3 AC091144.1-201ENST00000519573 138 ntBASIC0.91□□□□□ -2.26
EXOSC4Q9NPD3 AC024995.1-201ENST00000523014 93 ntBASIC0.91□□□□□ -2.26
EXOSC4Q9NPD3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.91□□□□□ -2.26
EXOSC4Q9NPD3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.91□□□□□ -2.26
EXOSC4Q9NPD3 MIR5695-201ENST00000579717 85 ntBASIC0.91□□□□□ -2.26
EXOSC4Q9NPD3 MIR4298-201ENST00000584380 73 ntBASIC0.91□□□□□ -2.26
EXOSC4Q9NPD3 SNORD114-21-201ENST00000606412 72 ntBASIC0.91□□□□□ -2.26
EXOSC4Q9NPD3 MIR8054-201ENST00000620877 86 ntBASIC0.91□□□□□ -2.26
EXOSC4Q9NPD3 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.91□□□□□ -2.26
EXOSC4Q9NPD3 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.91□□□□□ -2.26
EXOSC4Q9NPD3 Y_RNA.9-201ENST00000362354 101 ntBASIC0.9□□□□□ -2.27
EXOSC4Q9NPD3 U3.8-201ENST00000363675 217 ntBASIC0.9□□□□□ -2.27
EXOSC4Q9NPD3 Y_RNA.179-201ENST00000363844 90 ntBASIC0.9□□□□□ -2.27
EXOSC4Q9NPD3 Y_RNA.450-201ENST00000384198 113 ntBASIC0.9□□□□□ -2.27
EXOSC4Q9NPD3 RNU6-793P-201ENST00000384233 104 ntBASIC0.9□□□□□ -2.27
EXOSC4Q9NPD3 RNU6-842P-201ENST00000384269 107 ntBASIC0.9□□□□□ -2.27
EXOSC4Q9NPD3 RNU6-1065P-201ENST00000384513 106 ntBASIC0.9□□□□□ -2.27
EXOSC4Q9NPD3 RNU6-1031P-201ENST00000384773 107 ntBASIC0.9□□□□□ -2.27
EXOSC4Q9NPD3 MIR181A1-201ENST00000385026 110 ntBASIC0.9□□□□□ -2.27
EXOSC4Q9NPD3 SNORA12.1-201ENST00000390873 148 ntBASIC0.9□□□□□ -2.27
EXOSC4Q9NPD3 RNU6-440P-201ENST00000390882 105 ntBASIC0.9□□□□□ -2.27
EXOSC4Q9NPD3 MTND3P21-201ENST00000433774 331 ntBASIC0.9□□□□□ -2.27
EXOSC4Q9NPD3 RNU7-175P-201ENST00000515915 61 ntBASIC0.9□□□□□ -2.27
EXOSC4Q9NPD3 RNU6-864P-201ENST00000516256 108 ntBASIC0.9□□□□□ -2.27
EXOSC4Q9NPD3 RNU6-107P-201ENST00000516643 102 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 148.4 ms