Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 MIR410-201ENST00000362222 80 ntBASIC1.76□□□□□ -2.13
Q9N2K0 Y_RNA.197-201ENST00000364004 102 ntBASIC1.76□□□□□ -2.13
Q9N2K0 RNA5SP160-201ENST00000364866 120 ntBASIC1.76□□□□□ -2.13
Q9N2K0 Y_RNA.460-201ENST00000384255 102 ntBASIC1.76□□□□□ -2.13
Q9N2K0 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Q9N2K0 AL117342.1-201ENST00000404861 406 ntBASIC1.76□□□□□ -2.13
Q9N2K0 SNORD12B-201ENST00000410433 91 ntBASIC1.76□□□□□ -2.13
Q9N2K0 AC009310.1-201ENST00000414414 451 ntBASIC1.76□□□□□ -2.13
Q9N2K0 MTCO3P19-201ENST00000415864 321 ntBASIC1.76□□□□□ -2.13
Q9N2K0 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.76□□□□□ -2.13
Q9N2K0 OOSP1P1-201ENST00000423265 274 ntBASIC1.76□□□□□ -2.13
Q9N2K0 AC069257.2-201ENST00000441819 155 ntBASIC1.76□□□□□ -2.13
Q9N2K0 AC008413.1-201ENST00000511864 177 ntBASIC1.76□□□□□ -2.13
Q9N2K0 RNVU1-2-201ENST00000516326 135 ntBASIC1.76□□□□□ -2.13
Q9N2K0 SNRPGP18-201ENST00000553000 214 ntBASIC1.76□□□□□ -2.13
Q9N2K0 MIR4299-201ENST00000577899 72 ntBASIC1.76□□□□□ -2.13
Q9N2K0 AL096840.1-201ENST00000603287 93 ntBASIC1.76□□□□□ -2.13
Q9N2K0 uc_338.20-201ENST00000621563 178 ntBASIC1.76□□□□□ -2.13
Q9N2K0 MIR338-201ENST00000636369 67 ntBASIC1.76□□□□□ -2.13
Q9N2K0 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.75□□□□□ -2.13
Q9N2K0 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
Q9N2K0 Y_RNA.39-201ENST00000362620 98 ntBASIC1.75□□□□□ -2.13
Q9N2K0 RNU6-862P-201ENST00000362804 105 ntBASIC1.75□□□□□ -2.13
Q9N2K0 Y_RNA.61-201ENST00000362835 102 ntBASIC1.75□□□□□ -2.13
Q9N2K0 RNU1-96P-201ENST00000364163 162 ntBASIC1.75□□□□□ -2.13
Q9N2K0 RNU6-1019P-201ENST00000364424 107 ntBASIC1.75□□□□□ -2.13
Q9N2K0 RNU6-1310P-201ENST00000384153 107 ntBASIC1.75□□□□□ -2.13
Q9N2K0 Y_RNA.498-201ENST00000384460 102 ntBASIC1.75□□□□□ -2.13
Q9N2K0 Y_RNA.579-201ENST00000390939 94 ntBASIC1.75□□□□□ -2.13
Q9N2K0 ELOCP21-201ENST00000412558 336 ntBASIC1.75□□□□□ -2.13
Q9N2K0 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.75□□□□□ -2.13
Q9N2K0 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.75□□□□□ -2.13
Q9N2K0 FCF1P4-201ENST00000448326 183 ntBASIC1.75□□□□□ -2.13
Q9N2K0 AC112492.4-201ENST00000456549 352 ntBASIC1.75□□□□□ -2.13
Q9N2K0 RNU7-169P-201ENST00000459456 61 ntBASIC1.75□□□□□ -2.13
Q9N2K0 TRBV12-1-201ENST00000479785 344 ntBASIC1.75□□□□□ -2.13
Q9N2K0 AC027575.1-201ENST00000481064 460 ntBASIC1.75□□□□□ -2.13
Q9N2K0 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.75□□□□□ -2.13
Q9N2K0 AC018448.1-201ENST00000552843 316 ntBASIC1.75□□□□□ -2.13
Q9N2K0 MIR5094-201ENST00000578766 85 ntBASIC1.75□□□□□ -2.13
Q9N2K0 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.75□□□□□ -2.13
Q9N2K0 AC022432.1-201ENST00000595739 310 ntBASIC1.75□□□□□ -2.13
Q9N2K0 AC008749.1-201ENST00000597650 306 ntBASIC1.75□□□□□ -2.13
Q9N2K0 AC010900.2-201ENST00000604508 210 ntBASIC1.75□□□□□ -2.13
Q9N2K0 AL080274.1-201ENST00000605565 220 ntBASIC1.75□□□□□ -2.13
Q9N2K0 AC006435.5-201ENST00000624486 112 ntBASIC1.75□□□□□ -2.13
Q9N2K0 AC138305.3-201ENST00000624988 240 ntBASIC1.75□□□□□ -2.13
Q9N2K0 MTND5P6-201ENST00000422338 1798 ntBASIC1.75□□□□□ -2.13
Q9N2K0 Y_RNA.27-201ENST00000362540 103 ntBASIC1.74□□□□□ -2.13
Q9N2K0 SNORD78.2-201ENST00000391076 69 ntBASIC1.74□□□□□ -2.13
Q9N2K0 AC018865.2-201ENST00000423631 129 ntBASIC1.74□□□□□ -2.13
Q9N2K0 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.74□□□□□ -2.13
Q9N2K0 AC099677.2-201ENST00000436385 175 ntBASIC1.74□□□□□ -2.13
Q9N2K0 HMGN2P34-201ENST00000437647 269 ntBASIC1.74□□□□□ -2.13
Q9N2K0 RNU6-625P-201ENST00000459412 107 ntBASIC1.74□□□□□ -2.13
Q9N2K0 RNA5SP57-201ENST00000459463 123 ntBASIC1.74□□□□□ -2.13
Q9N2K0 SNORA40.9-201ENST00000515895 93 ntBASIC1.74□□□□□ -2.13
Q9N2K0 AC024995.1-201ENST00000523014 93 ntBASIC1.74□□□□□ -2.13
Q9N2K0 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.74□□□□□ -2.13
Q9N2K0 AC091544.4-201ENST00000555268 342 ntBASIC1.74□□□□□ -2.13
Q9N2K0 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.74□□□□□ -2.13
Q9N2K0 MIR4713-201ENST00000582691 75 ntBASIC1.74□□□□□ -2.13
Q9N2K0 MIR3935-201ENST00000583472 104 ntBASIC1.74□□□□□ -2.13
Q9N2K0 AL357075.2-201ENST00000614906 189 ntBASIC1.74□□□□□ -2.13
Q9N2K0 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.74□□□□□ -2.13
Q9N2K0 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.74□□□□□ -2.13
Q9N2K0 MIR4272-201ENST00000635924 64 ntBASIC1.74□□□□□ -2.13
Q9N2K0 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
Q9N2K0 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
Q9N2K0 RNU6-797P-201ENST00000363101 109 ntBASIC1.73□□□□□ -2.13
Q9N2K0 Y_RNA.112-201ENST00000363250 102 ntBASIC1.73□□□□□ -2.13
Q9N2K0 Y_RNA.395-201ENST00000383945 109 ntBASIC1.73□□□□□ -2.13
Q9N2K0 RNA5SP475-201ENST00000410568 110 ntBASIC1.73□□□□□ -2.13
Q9N2K0 RNA5SP100-201ENST00000410903 110 ntBASIC1.73□□□□□ -2.13
Q9N2K0 RNA5SP59-201ENST00000410922 110 ntBASIC1.73□□□□□ -2.13
Q9N2K0 AC016909.1-201ENST00000415916 166 ntBASIC1.73□□□□□ -2.13
Q9N2K0 EBAG9P1-201ENST00000418955 543 ntBASIC1.73□□□□□ -2.13
Q9N2K0 SUMO1P2-201ENST00000452524 304 ntBASIC1.73□□□□□ -2.13
Q9N2K0 HMGN1P13-201ENST00000505795 138 ntBASIC1.73□□□□□ -2.13
Q9N2K0 Y_RNA.661-201ENST00000516003 99 ntBASIC1.73□□□□□ -2.13
Q9N2K0 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.73□□□□□ -2.13
Q9N2K0 AL137100.2-201ENST00000555786 315 ntBASIC1.73□□□□□ -2.13
Q9N2K0 AC022254.1-201ENST00000567857 235 ntBASIC1.73□□□□□ -2.13
Q9N2K0 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.73□□□□□ -2.13
Q9N2K0 AC090971.5-201ENST00000621102 293 ntBASIC1.73□□□□□ -2.13
Q9N2K0 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.73□□□□□ -2.13
Q9N2K0 AL160413.1-201ENST00000622780 310 ntBASIC1.73□□□□□ -2.13
Q9N2K0 AC090574.1-201ENST00000623186 233 ntBASIC1.73□□□□□ -2.13
Q9N2K0 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
Q9N2K0 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.72□□□□□ -2.13
Q9N2K0 XGY1-201ENST00000381172 446 ntBASIC1.72□□□□□ -2.13
Q9N2K0 Y_RNA.526-201ENST00000384572 110 ntBASIC1.72□□□□□ -2.13
Q9N2K0 MIR520A-201ENST00000384862 85 ntBASIC1.72□□□□□ -2.13
Q9N2K0 MRPL35P1-201ENST00000404272 572 ntBASIC1.72□□□□□ -2.13
Q9N2K0 RPS20P15-201ENST00000412792 311 ntBASIC1.72□□□□□ -2.13
Q9N2K0 RAB28P5-201ENST00000427490 651 ntBASIC1.72□□□□□ -2.13
Q9N2K0 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.72□□□□□ -2.13
Q9N2K0 AC010598.1-201ENST00000510378 103 ntBASIC1.72□□□□□ -2.13
Q9N2K0 SNORA40.14-201ENST00000516543 86 ntBASIC1.72□□□□□ -2.13
Q9N2K0 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 187.4 ms