Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.09□□□□□ -1.91
PCDH18Q9HCL0 RNU6-711P-201ENST00000517255 106 ntBASIC3.09□□□□□ -1.91
PCDH18Q9HCL0 AC022616.8-201ENST00000533569 253 ntBASIC3.09□□□□□ -1.91
PCDH18Q9HCL0 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.09□□□□□ -1.91
PCDH18Q9HCL0 MIR4744-201ENST00000581563 82 ntBASIC3.09□□□□□ -1.91
PCDH18Q9HCL0 RNU6-91P-201ENST00000607774 107 ntBASIC3.09□□□□□ -1.91
PCDH18Q9HCL0 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCDH18Q9HCL0 Y_RNA.121-201ENST00000363309 113 ntBASIC3.08□□□□□ -1.92
PCDH18Q9HCL0 Y_RNA.243-201ENST00000364481 109 ntBASIC3.08□□□□□ -1.92
PCDH18Q9HCL0 SNORD14D-201ENST00000384390 87 ntBASIC3.08□□□□□ -1.92
PCDH18Q9HCL0 AC006461.1-201ENST00000412637 326 ntBASIC3.08□□□□□ -1.92
PCDH18Q9HCL0 RNU7-141P-201ENST00000459304 62 ntBASIC3.08□□□□□ -1.92
PCDH18Q9HCL0 RNU6-1098P-201ENST00000516772 96 ntBASIC3.08□□□□□ -1.92
PCDH18Q9HCL0 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDH18Q9HCL0 MIR3944-201ENST00000581277 108 ntBASIC3.08□□□□□ -1.92
PCDH18Q9HCL0 AC007179.3-201ENST00000604976 235 ntBASIC3.08□□□□□ -1.92
PCDH18Q9HCL0 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
PCDH18Q9HCL0 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCDH18Q9HCL0 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDH18Q9HCL0 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.08□□□□□ -1.92
PCDH18Q9HCL0 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.08□□□□□ -1.92
PCDH18Q9HCL0 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.08□□□□□ -1.92
PCDH18Q9HCL0 AL391516.1-201ENST00000554380 2449 ntBASIC3.08□□□□□ -1.92
PCDH18Q9HCL0 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.08□□□□□ -1.92
PCDH18Q9HCL0 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PCDH18Q9HCL0 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PCDH18Q9HCL0 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PCDH18Q9HCL0 SNORA71.1-201ENST00000364523 117 ntBASIC3.07□□□□□ -1.92
PCDH18Q9HCL0 Y_RNA.261-201ENST00000364631 102 ntBASIC3.07□□□□□ -1.92
PCDH18Q9HCL0 SNORA8.3-201ENST00000384679 139 ntBASIC3.07□□□□□ -1.92
PCDH18Q9HCL0 MIR626-201ENST00000385032 94 ntBASIC3.07□□□□□ -1.92
PCDH18Q9HCL0 RNU6-239P-201ENST00000390990 99 ntBASIC3.07□□□□□ -1.92
PCDH18Q9HCL0 RNU6-383P-201ENST00000410864 94 ntBASIC3.07□□□□□ -1.92
PCDH18Q9HCL0 HSPE1P21-201ENST00000438283 308 ntBASIC3.07□□□□□ -1.92
PCDH18Q9HCL0 AL137159.1-201ENST00000452808 512 ntBASIC3.07□□□□□ -1.92
PCDH18Q9HCL0 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.07□□□□□ -1.92
PCDH18Q9HCL0 RPS29P2-201ENST00000479278 136 ntBASIC3.07□□□□□ -1.92
PCDH18Q9HCL0 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.07□□□□□ -1.92
PCDH18Q9HCL0 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.07□□□□□ -1.92
PCDH18Q9HCL0 RNU6-561P-201ENST00000516222 102 ntBASIC3.07□□□□□ -1.92
PCDH18Q9HCL0 RNU6-313P-201ENST00000516317 112 ntBASIC3.07□□□□□ -1.92
PCDH18Q9HCL0 RNU6-62P-201ENST00000516526 102 ntBASIC3.07□□□□□ -1.92
PCDH18Q9HCL0 SNORD59.2-201ENST00000516873 68 ntBASIC3.07□□□□□ -1.92
PCDH18Q9HCL0 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.07□□□□□ -1.92
PCDH18Q9HCL0 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.07□□□□□ -1.92
PCDH18Q9HCL0 AL670379.2-201ENST00000604983 252 ntBASIC3.07□□□□□ -1.92
PCDH18Q9HCL0 MIR3651-201ENST00000630427 90 ntBASIC3.07□□□□□ -1.92
PCDH18Q9HCL0 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
PCDH18Q9HCL0 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
PCDH18Q9HCL0 AC010680.1-201ENST00000590024 3590 ntBASIC3.07□□□□□ -1.92
PCDH18Q9HCL0 SNORA14A-201ENST00000364773 135 ntBASIC3.06□□□□□ -1.92
PCDH18Q9HCL0 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.06□□□□□ -1.92
PCDH18Q9HCL0 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.06□□□□□ -1.92
PCDH18Q9HCL0 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.06□□□□□ -1.92
PCDH18Q9HCL0 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.06□□□□□ -1.92
PCDH18Q9HCL0 RNU5F-4P-201ENST00000516581 114 ntBASIC3.06□□□□□ -1.92
PCDH18Q9HCL0 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.06□□□□□ -1.92
PCDH18Q9HCL0 MIR3684-201ENST00000579779 74 ntBASIC3.06□□□□□ -1.92
PCDH18Q9HCL0 AC023043.3-201ENST00000593113 385 ntBASIC3.06□□□□□ -1.92
PCDH18Q9HCL0 RPL30P11-203ENST00000598995 310 ntBASIC3.06□□□□□ -1.92
PCDH18Q9HCL0 Y_RNA.802-201ENST00000614892 130 ntBASIC3.06□□□□□ -1.92
PCDH18Q9HCL0 MIR8057-201ENST00000620957 69 ntBASIC3.06□□□□□ -1.92
PCDH18Q9HCL0 RNU6-1205P-201ENST00000363625 106 ntBASIC3.05□□□□□ -1.92
PCDH18Q9HCL0 Y_RNA.310-201ENST00000365063 113 ntBASIC3.05□□□□□ -1.92
PCDH18Q9HCL0 MIR767-201ENST00000390228 109 ntBASIC3.05□□□□□ -1.92
PCDH18Q9HCL0 AC009414.1-201ENST00000427200 443 ntBASIC3.05□□□□□ -1.92
PCDH18Q9HCL0 TOMM22P2-201ENST00000430735 237 ntBASIC3.05□□□□□ -1.92
PCDH18Q9HCL0 AL121914.1-201ENST00000450188 156 ntBASIC3.05□□□□□ -1.92
PCDH18Q9HCL0 AP004217.1-201ENST00000480579 346 ntBASIC3.05□□□□□ -1.92
PCDH18Q9HCL0 AC117454.1-201ENST00000491120 168 ntBASIC3.05□□□□□ -1.92
PCDH18Q9HCL0 RN7SKP164-201ENST00000516138 266 ntBASIC3.05□□□□□ -1.92
PCDH18Q9HCL0 RNU6-971P-201ENST00000516920 106 ntBASIC3.05□□□□□ -1.92
PCDH18Q9HCL0 SNORA31.21-201ENST00000517180 77 ntBASIC3.05□□□□□ -1.92
PCDH18Q9HCL0 MIR548X2-201ENST00000579776 100 ntBASIC3.05□□□□□ -1.92
PCDH18Q9HCL0 AC096577.2-201ENST00000611455 153 ntBASIC3.05□□□□□ -1.92
PCDH18Q9HCL0 AC008873.1-201ENST00000625051 138 ntBASIC3.05□□□□□ -1.92
PCDH18Q9HCL0 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PCDH18Q9HCL0 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PCDH18Q9HCL0 MIR208A-201ENST00000362287 71 ntBASIC3.04□□□□□ -1.92
PCDH18Q9HCL0 RNU6-899P-201ENST00000363947 107 ntBASIC3.04□□□□□ -1.92
PCDH18Q9HCL0 SNORD46.1-201ENST00000364139 104 ntBASIC3.04□□□□□ -1.92
PCDH18Q9HCL0 U8.7-201ENST00000364940 136 ntBASIC3.04□□□□□ -1.92
PCDH18Q9HCL0 AC097463.2-201ENST00000421074 142 ntBASIC3.04□□□□□ -1.92
PCDH18Q9HCL0 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.04□□□□□ -1.92
PCDH18Q9HCL0 AC109810.1-201ENST00000534066 224 ntBASIC3.04□□□□□ -1.92
PCDH18Q9HCL0 AC079598.5-201ENST00000547460 117 ntBASIC3.04□□□□□ -1.92
PCDH18Q9HCL0 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
PCDH18Q9HCL0 MIR4431-201ENST00000579990 94 ntBASIC3.04□□□□□ -1.92
PCDH18Q9HCL0 AL031274.2-201ENST00000599419 203 ntBASIC3.04□□□□□ -1.92
PCDH18Q9HCL0 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
PCDH18Q9HCL0 AL078604.3-201ENST00000615580 211 ntBASIC3.04□□□□□ -1.92
PCDH18Q9HCL0 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.04□□□□□ -1.92
PCDH18Q9HCL0 AC091953.5-201ENST00000622919 233 ntBASIC3.04□□□□□ -1.92
PCDH18Q9HCL0 MAPK10-322ENST00000641485 4530 ntBASIC3.04□□□□□ -1.92
PCDH18Q9HCL0 GABRG2-229ENST00000641017 3628 ntBASIC3.04□□□□□ -1.92
PCDH18Q9HCL0 ZNF702P-202ENST00000434269 1966 ntBASIC3.03□□□□□ -1.92
PCDH18Q9HCL0 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
PCDH18Q9HCL0 AC010332.2-201ENST00000613083 1904 ntBASIC3.03□□□□□ -1.92
PCDH18Q9HCL0 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PCDH18Q9HCL0 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms