Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 Y_RNA.380-201ENST00000365663 111 ntBASIC2.12□□□□□ -2.07
PCDH9Q9HC56 MIR17-201ENST00000385012 84 ntBASIC2.12□□□□□ -2.07
PCDH9Q9HC56 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
PCDH9Q9HC56 AL079342.1-201ENST00000401460 267 ntBASIC2.12□□□□□ -2.07
PCDH9Q9HC56 SDAD1P3-201ENST00000427380 333 ntBASIC2.12□□□□□ -2.07
PCDH9Q9HC56 RPEP5-201ENST00000441137 268 ntBASIC2.12□□□□□ -2.07
PCDH9Q9HC56 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.12□□□□□ -2.07
PCDH9Q9HC56 MTND5P22-201ENST00000458380 195 ntBASIC2.12□□□□□ -2.07
PCDH9Q9HC56 TRBV12-1-201ENST00000479785 344 ntBASIC2.12□□□□□ -2.07
PCDH9Q9HC56 AC079804.2-201ENST00000490376 200 ntBASIC2.12□□□□□ -2.07
PCDH9Q9HC56 AC034114.1-201ENST00000520293 285 ntBASIC2.12□□□□□ -2.07
PCDH9Q9HC56 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.12□□□□□ -2.07
PCDH9Q9HC56 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.12□□□□□ -2.07
PCDH9Q9HC56 AC008269.2-201ENST00000561915 1105 ntBASIC2.12□□□□□ -2.07
PCDH9Q9HC56 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.12□□□□□ -2.07
PCDH9Q9HC56 RAC1P9-201ENST00000604990 392 ntBASIC2.12□□□□□ -2.07
PCDH9Q9HC56 AL121655.1-201ENST00000605811 308 ntBASIC2.12□□□□□ -2.07
PCDH9Q9HC56 Y_RNA.772-201ENST00000606692 102 ntBASIC2.12□□□□□ -2.07
PCDH9Q9HC56 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.12□□□□□ -2.07
PCDH9Q9HC56 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.12□□□□□ -2.07
PCDH9Q9HC56 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.11□□□□□ -2.07
PCDH9Q9HC56 AC009487.4-201ENST00000624969 3585 ntBASIC2.11□□□□□ -2.07
PCDH9Q9HC56 RNU6-961P-201ENST00000363893 105 ntBASIC2.11□□□□□ -2.07
PCDH9Q9HC56 Y_RNA.439-201ENST00000384119 94 ntBASIC2.11□□□□□ -2.07
PCDH9Q9HC56 SNORA64-201ENST00000384674 134 ntBASIC2.11□□□□□ -2.07
PCDH9Q9HC56 AL023284.1-201ENST00000403956 276 ntBASIC2.11□□□□□ -2.07
PCDH9Q9HC56 AL357139.1-201ENST00000407792 426 ntBASIC2.11□□□□□ -2.07
PCDH9Q9HC56 RNA5SP504-201ENST00000410676 117 ntBASIC2.11□□□□□ -2.07
PCDH9Q9HC56 RNU6-130P-201ENST00000411112 103 ntBASIC2.11□□□□□ -2.07
PCDH9Q9HC56 RN7SKP192-201ENST00000411291 327 ntBASIC2.11□□□□□ -2.07
PCDH9Q9HC56 RNA5SP270-201ENST00000411361 118 ntBASIC2.11□□□□□ -2.07
PCDH9Q9HC56 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.11□□□□□ -2.07
PCDH9Q9HC56 MRPS35P2-201ENST00000508242 191 ntBASIC2.11□□□□□ -2.07
PCDH9Q9HC56 RNY3P15-201ENST00000516297 97 ntBASIC2.11□□□□□ -2.07
PCDH9Q9HC56 RNU6-897P-201ENST00000517135 105 ntBASIC2.11□□□□□ -2.07
PCDH9Q9HC56 AC018448.1-201ENST00000552843 316 ntBASIC2.11□□□□□ -2.07
PCDH9Q9HC56 MIR4753-201ENST00000585119 83 ntBASIC2.11□□□□□ -2.07
PCDH9Q9HC56 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.11□□□□□ -2.07
PCDH9Q9HC56 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.11□□□□□ -2.07
PCDH9Q9HC56 AC068205.3-201ENST00000636385 468 ntBASIC2.11□□□□□ -2.07
PCDH9Q9HC56 AL359851.1-201ENST00000569460 4997 ntBASIC2.11□□□□□ -2.07
PCDH9Q9HC56 AC245060.5-201ENST00000610778 3293 ntBASIC2.1□□□□□ -2.07
PCDH9Q9HC56 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
PCDH9Q9HC56 U8.2-201ENST00000363156 134 ntBASIC2.1□□□□□ -2.07
PCDH9Q9HC56 RNU6-1309P-201ENST00000363305 108 ntBASIC2.1□□□□□ -2.07
PCDH9Q9HC56 RNU6-626P-201ENST00000363354 107 ntBASIC2.1□□□□□ -2.07
PCDH9Q9HC56 Y_RNA.152-201ENST00000363578 100 ntBASIC2.1□□□□□ -2.07
PCDH9Q9HC56 SNORD31B-201ENST00000364977 69 ntBASIC2.1□□□□□ -2.07
PCDH9Q9HC56 SNORA63.7-201ENST00000365579 123 ntBASIC2.1□□□□□ -2.07
PCDH9Q9HC56 SNORA67.3-201ENST00000384366 140 ntBASIC2.1□□□□□ -2.07
PCDH9Q9HC56 MIR1283-1-201ENST00000408494 87 ntBASIC2.1□□□□□ -2.07
PCDH9Q9HC56 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.1□□□□□ -2.07
PCDH9Q9HC56 AL356379.1-201ENST00000414105 126 ntBASIC2.1□□□□□ -2.07
PCDH9Q9HC56 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.1□□□□□ -2.07
PCDH9Q9HC56 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.1□□□□□ -2.07
PCDH9Q9HC56 AC016717.1-201ENST00000448918 286 ntBASIC2.1□□□□□ -2.07
PCDH9Q9HC56 RNU6-625P-201ENST00000459412 107 ntBASIC2.1□□□□□ -2.07
PCDH9Q9HC56 HMGN1P10-201ENST00000474557 553 ntBASIC2.1□□□□□ -2.07
PCDH9Q9HC56 AC010655.3-201ENST00000478818 450 ntBASIC2.1□□□□□ -2.07
PCDH9Q9HC56 AC093259.1-201ENST00000509755 300 ntBASIC2.1□□□□□ -2.07
PCDH9Q9HC56 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.1□□□□□ -2.07
PCDH9Q9HC56 RNU6-635P-201ENST00000516651 102 ntBASIC2.1□□□□□ -2.07
PCDH9Q9HC56 MIR514B-201ENST00000516774 80 ntBASIC2.1□□□□□ -2.07
PCDH9Q9HC56 SNORA40.15-201ENST00000516884 107 ntBASIC2.1□□□□□ -2.07
PCDH9Q9HC56 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.1□□□□□ -2.07
PCDH9Q9HC56 AL355297.3-201ENST00000604082 446 ntBASIC2.1□□□□□ -2.07
PCDH9Q9HC56 AC005034.5-201ENST00000604219 466 ntBASIC2.1□□□□□ -2.07
PCDH9Q9HC56 AC022202.1-201ENST00000613515 211 ntBASIC2.1□□□□□ -2.07
PCDH9Q9HC56 U4atac.1-201ENST00000618345 95 ntBASIC2.1□□□□□ -2.07
PCDH9Q9HC56 MIR219B-201ENST00000637023 88 ntBASIC2.1□□□□□ -2.07
PCDH9Q9HC56 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
PCDH9Q9HC56 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.1□□□□□ -2.07
PCDH9Q9HC56 SNORD115-3-201ENST00000363100 82 ntBASIC2.09□□□□□ -2.07
PCDH9Q9HC56 RNU6-418P-201ENST00000384035 107 ntBASIC2.09□□□□□ -2.07
PCDH9Q9HC56 RNU6-20P-201ENST00000384106 107 ntBASIC2.09□□□□□ -2.07
PCDH9Q9HC56 RNU6-611P-201ENST00000384276 104 ntBASIC2.09□□□□□ -2.07
PCDH9Q9HC56 snosnR66.1-201ENST00000391095 99 ntBASIC2.09□□□□□ -2.07
PCDH9Q9HC56 MIR300-201ENST00000401138 83 ntBASIC2.09□□□□□ -2.07
PCDH9Q9HC56 ELOCP21-201ENST00000412558 336 ntBASIC2.09□□□□□ -2.07
PCDH9Q9HC56 AL139156.1-201ENST00000412785 841 ntBASIC2.09□□□□□ -2.07
PCDH9Q9HC56 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.09□□□□□ -2.07
PCDH9Q9HC56 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.09□□□□□ -2.07
PCDH9Q9HC56 PRELID3BP1-201ENST00000457142 540 ntBASIC2.09□□□□□ -2.07
PCDH9Q9HC56 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.09□□□□□ -2.07
PCDH9Q9HC56 AC067942.3-201ENST00000512025 362 ntBASIC2.09□□□□□ -2.07
PCDH9Q9HC56 CYCSP23-201ENST00000519781 313 ntBASIC2.09□□□□□ -2.07
PCDH9Q9HC56 AK6P2-201ENST00000549020 471 ntBASIC2.09□□□□□ -2.07
PCDH9Q9HC56 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
PCDH9Q9HC56 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
PCDH9Q9HC56 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
PCDH9Q9HC56 Y_RNA.214-201ENST00000364201 112 ntBASIC2.08□□□□□ -2.08
PCDH9Q9HC56 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.08□□□□□ -2.08
PCDH9Q9HC56 SNORA70B-201ENST00000384210 135 ntBASIC2.08□□□□□ -2.08
PCDH9Q9HC56 SNORA67.2-201ENST00000384300 149 ntBASIC2.08□□□□□ -2.08
PCDH9Q9HC56 RNU6-937P-201ENST00000384325 106 ntBASIC2.08□□□□□ -2.08
PCDH9Q9HC56 SNORD14D-201ENST00000384390 87 ntBASIC2.08□□□□□ -2.08
PCDH9Q9HC56 MIR548B-201ENST00000385247 97 ntBASIC2.08□□□□□ -2.08
PCDH9Q9HC56 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.08□□□□□ -2.08
PCDH9Q9HC56 ELOCP20-201ENST00000422460 345 ntBASIC2.08□□□□□ -2.08
PCDH9Q9HC56 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 143.1 ms