Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
BCAS3Q9H6U6 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
BCAS3Q9H6U6 Y_RNA.287-201ENST00000364853 94 ntBASIC3.19□□□□□ -1.9
BCAS3Q9H6U6 Y_RNA.456-201ENST00000384232 111 ntBASIC3.19□□□□□ -1.9
BCAS3Q9H6U6 RNU1-57P-201ENST00000384491 166 ntBASIC3.19□□□□□ -1.9
BCAS3Q9H6U6 RNU6-851P-201ENST00000384565 107 ntBASIC3.19□□□□□ -1.9
BCAS3Q9H6U6 MIR181B1-201ENST00000385240 110 ntBASIC3.19□□□□□ -1.9
BCAS3Q9H6U6 Y_RNA.586-201ENST00000391146 98 ntBASIC3.19□□□□□ -1.9
BCAS3Q9H6U6 RNA5SP274-201ENST00000410484 108 ntBASIC3.19□□□□□ -1.9
BCAS3Q9H6U6 RNU2-49P-201ENST00000410666 184 ntBASIC3.19□□□□□ -1.9
BCAS3Q9H6U6 AC027124.2-201ENST00000428249 105 ntBASIC3.19□□□□□ -1.9
BCAS3Q9H6U6 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.19□□□□□ -1.9
BCAS3Q9H6U6 RPS27P29-201ENST00000463110 252 ntBASIC3.19□□□□□ -1.9
BCAS3Q9H6U6 AC010409.1-201ENST00000487382 476 ntBASIC3.19□□□□□ -1.9
BCAS3Q9H6U6 AC145146.1-201ENST00000496370 254 ntBASIC3.19□□□□□ -1.9
BCAS3Q9H6U6 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.19□□□□□ -1.9
BCAS3Q9H6U6 AC069528.2-201ENST00000624849 1991 ntBASIC3.19□□□□□ -1.9
BCAS3Q9H6U6 AC009487.2-201ENST00000420969 6821 ntBASIC3.19□□□□□ -1.9
BCAS3Q9H6U6 AC096644.4-201ENST00000563417 2912 ntBASIC3.19□□□□□ -1.9
BCAS3Q9H6U6 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
BCAS3Q9H6U6 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
BCAS3Q9H6U6 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
BCAS3Q9H6U6 SNORD87-201ENST00000364849 89 ntBASIC3.18□□□□□ -1.9
BCAS3Q9H6U6 SNORA9.2-201ENST00000365361 133 ntBASIC3.18□□□□□ -1.9
BCAS3Q9H6U6 RNU6-376P-201ENST00000384731 106 ntBASIC3.18□□□□□ -1.9
BCAS3Q9H6U6 MIR181A2-201ENST00000384863 110 ntBASIC3.18□□□□□ -1.9
BCAS3Q9H6U6 MIR147B-201ENST00000390185 80 ntBASIC3.18□□□□□ -1.9
BCAS3Q9H6U6 MIR526A2-201ENST00000390198 65 ntBASIC3.18□□□□□ -1.9
BCAS3Q9H6U6 RNA5SP38-201ENST00000410750 119 ntBASIC3.18□□□□□ -1.9
BCAS3Q9H6U6 AP004217.1-201ENST00000480579 346 ntBASIC3.18□□□□□ -1.9
BCAS3Q9H6U6 RN7SKP43-201ENST00000516173 320 ntBASIC3.18□□□□□ -1.9
BCAS3Q9H6U6 AC025281.1-201ENST00000567026 265 ntBASIC3.18□□□□□ -1.9
BCAS3Q9H6U6 MIR4744-201ENST00000581563 82 ntBASIC3.18□□□□□ -1.9
BCAS3Q9H6U6 MIR5006-201ENST00000583027 110 ntBASIC3.18□□□□□ -1.9
BCAS3Q9H6U6 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.18□□□□□ -1.9
BCAS3Q9H6U6 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
BCAS3Q9H6U6 AC068700.1-201ENST00000565862 3754 ntBASIC3.18□□□□□ -1.9
BCAS3Q9H6U6 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
BCAS3Q9H6U6 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
BCAS3Q9H6U6 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
BCAS3Q9H6U6 RNU6-899P-201ENST00000363947 107 ntBASIC3.17□□□□□ -1.9
BCAS3Q9H6U6 RNU6-324P-201ENST00000363957 106 ntBASIC3.17□□□□□ -1.9
BCAS3Q9H6U6 Y_RNA.310-201ENST00000365063 113 ntBASIC3.17□□□□□ -1.9
BCAS3Q9H6U6 SNORA18.2-201ENST00000383865 132 ntBASIC3.17□□□□□ -1.9
BCAS3Q9H6U6 MIR569-201ENST00000385228 96 ntBASIC3.17□□□□□ -1.9
BCAS3Q9H6U6 RNU6-1168P-201ENST00000390831 104 ntBASIC3.17□□□□□ -1.9
BCAS3Q9H6U6 RNU6-578P-201ENST00000390980 103 ntBASIC3.17□□□□□ -1.9
BCAS3Q9H6U6 RPS20P10-201ENST00000451209 253 ntBASIC3.17□□□□□ -1.9
BCAS3Q9H6U6 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.17□□□□□ -1.9
BCAS3Q9H6U6 SNORD116-25-201ENST00000516517 92 ntBASIC3.17□□□□□ -1.9
BCAS3Q9H6U6 RNU6-107P-201ENST00000516643 102 ntBASIC3.17□□□□□ -1.9
BCAS3Q9H6U6 RNU2-44P-201ENST00000516795 194 ntBASIC3.17□□□□□ -1.9
BCAS3Q9H6U6 AC021269.2-201ENST00000532318 330 ntBASIC3.17□□□□□ -1.9
BCAS3Q9H6U6 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.17□□□□□ -1.9
BCAS3Q9H6U6 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.17□□□□□ -1.9
BCAS3Q9H6U6 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.17□□□□□ -1.9
BCAS3Q9H6U6 U6.115-201ENST00000636045 103 ntBASIC3.17□□□□□ -1.9
BCAS3Q9H6U6 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
BCAS3Q9H6U6 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.16□□□□□ -1.9
BCAS3Q9H6U6 SNORA8.3-201ENST00000384679 139 ntBASIC3.16□□□□□ -1.9
BCAS3Q9H6U6 MIR586-201ENST00000385035 97 ntBASIC3.16□□□□□ -1.9
BCAS3Q9H6U6 CR769767.1-201ENST00000436337 346 ntBASIC3.16□□□□□ -1.9
BCAS3Q9H6U6 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.16□□□□□ -1.9
BCAS3Q9H6U6 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.16□□□□□ -1.9
BCAS3Q9H6U6 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.16□□□□□ -1.9
BCAS3Q9H6U6 Y_RNA.797-201ENST00000515977 94 ntBASIC3.16□□□□□ -1.9
BCAS3Q9H6U6 AC099778.2-201ENST00000610904 211 ntBASIC3.16□□□□□ -1.9
BCAS3Q9H6U6 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.16□□□□□ -1.9
BCAS3Q9H6U6 AL159152.1-201ENST00000635019 2587 ntBASIC3.16□□□□□ -1.9
BCAS3Q9H6U6 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
BCAS3Q9H6U6 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.15□□□□□ -1.9
BCAS3Q9H6U6 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
BCAS3Q9H6U6 AL136360.1-201ENST00000503377 1900 ntBASIC3.15□□□□□ -1.9
BCAS3Q9H6U6 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
BCAS3Q9H6U6 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
BCAS3Q9H6U6 snoU2_19.4-201ENST00000364329 80 ntBASIC3.15□□□□□ -1.91
BCAS3Q9H6U6 SNORD32B-201ENST00000364460 84 ntBASIC3.15□□□□□ -1.91
BCAS3Q9H6U6 AL138827.1-201ENST00000402666 306 ntBASIC3.15□□□□□ -1.91
BCAS3Q9H6U6 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.15□□□□□ -1.91
BCAS3Q9H6U6 SNORD109B-201ENST00000458961 67 ntBASIC3.15□□□□□ -1.91
BCAS3Q9H6U6 SNORD109A-201ENST00000459128 67 ntBASIC3.15□□□□□ -1.91
BCAS3Q9H6U6 RNU6-237P-201ENST00000515985 71 ntBASIC3.15□□□□□ -1.91
BCAS3Q9H6U6 RNU6-313P-201ENST00000516317 112 ntBASIC3.15□□□□□ -1.91
BCAS3Q9H6U6 SNORA31.21-201ENST00000517180 77 ntBASIC3.15□□□□□ -1.91
BCAS3Q9H6U6 AC093331.1-201ENST00000521474 169 ntBASIC3.15□□□□□ -1.91
BCAS3Q9H6U6 MIR548X2-201ENST00000579776 100 ntBASIC3.15□□□□□ -1.91
BCAS3Q9H6U6 AC069294.1-201ENST00000608397 350 ntBASIC3.15□□□□□ -1.91
BCAS3Q9H6U6 AL391903.3-201ENST00000612158 163 ntBASIC3.15□□□□□ -1.91
BCAS3Q9H6U6 AL136164.4-201ENST00000625013 2135 ntBASIC3.15□□□□□ -1.91
BCAS3Q9H6U6 MIR7153-201ENST00000637758 57 ntBASIC3.15□□□□□ -1.91
BCAS3Q9H6U6 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
BCAS3Q9H6U6 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
BCAS3Q9H6U6 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.14□□□□□ -1.91
BCAS3Q9H6U6 MIR616-201ENST00000385293 97 ntBASIC3.14□□□□□ -1.91
BCAS3Q9H6U6 MIR1261-201ENST00000408659 82 ntBASIC3.14□□□□□ -1.91
BCAS3Q9H6U6 RNU6-257P-201ENST00000410238 98 ntBASIC3.14□□□□□ -1.91
BCAS3Q9H6U6 RNA5SP184-201ENST00000411071 108 ntBASIC3.14□□□□□ -1.91
BCAS3Q9H6U6 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.14□□□□□ -1.91
BCAS3Q9H6U6 SRIP1-201ENST00000489235 288 ntBASIC3.14□□□□□ -1.91
BCAS3Q9H6U6 SNORA70.12-201ENST00000516084 153 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms